RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 CYP3A7-CYP3A51PA0A087WV96 503 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 ERICH4A6NGS2 130 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 POTEMA6NI47 508 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 MYO1CO00159 1063 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 NFIBO00712 420 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 CYP3A7P24462 503 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
HERC4-207ENST00000460168 NAP1L1P55209 391 aaKnown RBP11.57□□□□□ -0.56
HERC4-207ENST00000460168 NLRP12P59046 1061 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 SH3D19Q5HYK7 790 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 RRAGBQ5VZM2 374 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 ERO1BQ86YB8 467 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 MCF2L2Q86YR7 1114 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 PAGE5Q96GU1 130 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 CLMNQ96JQ2 1002 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 PCDHGA4Q9Y5G9 962 aa11.57□□□□□ -0.56
HERC4-207ENST00000460168 BECN2A8MW95 431 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 SMAPO00193 183 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 PES1O00541 588 aaKnown RBP11.56□□□□□ -0.56
HERC4-207ENST00000460168 SMC2O95347 1197 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 POTEIP0CG38 1075 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 PPATQ06203 517 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 MFSD4BQ5TF39 518 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 CATSPERGQ6ZRH7 1159 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 ARMC9Q7Z3E5 817 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 STAMQ92783 540 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 HAS1Q92839 578 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 GJA10Q969M2 543 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 CALML4Q96GE6 196 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 WNK4Q96J92 1243 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 PLIN2Q99541 437 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 TACO1Q9BSH4 297 aaKnown RBP11.56□□□□□ -0.56
HERC4-207ENST00000460168 ZNF408Q9H9D4 720 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 FAM86B1E9PN63 330 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 GOLGA6L19H0YKK7 550 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 FAM86B2P0C5J1 330 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 DSG3P32926 999 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 UBXN2AP68543 259 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 PDIA5Q14554 519 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 SYCP1Q15431 976 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 MAP1SQ66K74 1059 aaPredicted RBP11.56□□□□□ -0.56
HERC4-207ENST00000460168 PDXDC2PQ6P474 469 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 SLFN12Q8IYM2 578 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 MICALL1Q8N3F8 863 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 UIMC1Q96RL1 719 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 KCNMB3Q9NPA1 279 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 HOXC10Q9NYD6 342 aa11.56□□□□□ -0.56
HERC4-207ENST00000460168 COL11A1P12107 1806 aaPredicted RBP11.55□□□□□ -0.56
HERC4-207ENST00000460168 PTPRFP10586 1907 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 ECEL1O95672 775 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 CYP3A4P08684 503 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 HSD17B4P51659 736 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 Q4G0T1 1027 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 KRT79Q5XKE5 535 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 SNRNP48Q6IEG0 339 aaKnown RBP11.55□□□□□ -0.56
HERC4-207ENST00000460168 GADL1Q6ZQY3 521 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 CLEC4DQ8WXI8 215 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 CDK5RAP3Q96JB5 506 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 MBOAT7Q96N66 472 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 CWC15Q9P013 229 aaKnown RBP11.55□□□□□ -0.56
HERC4-207ENST00000460168 SPDYE5A6NIY4 337 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 PLCG1P19174 1290 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 CASP1P29466 404 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 CIITAP33076 1130 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 OAZ1P54368 228 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 PLS1Q14651 629 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 TREML2Q5T2D2 321 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 NT5DC1Q5TFE4 455 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 SH3RF1Q7Z6J0 888 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 KRT222Q8N1A0 295 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 PIAS4Q8N2W9 510 aaPredicted RBP11.55□□□□□ -0.56
HERC4-207ENST00000460168 SNX29Q8TEQ0 813 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 MMTAG2Q9BU76 263 aaKnown RBP11.55□□□□□ -0.56
HERC4-207ENST00000460168 RLFQ13129 1914 aa11.55□□□□□ -0.56
HERC4-207ENST00000460168 MYPNQ86TC9 1320 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 SPDYE16A6NNV3 312 aaPredicted RBP11.54□□□□□ -0.56
HERC4-207ENST00000460168 TBX3O15119 743 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 SARSP49591 514 aaKnown RBP11.54□□□□□ -0.56
HERC4-207ENST00000460168 BMS1Q14692 1282 aaKnown RBP11.54□□□□□ -0.56
HERC4-207ENST00000460168 NAALADL2Q58DX5 795 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 NSMFQ6X4W1 530 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 AOPEPQ8N6M6 819 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 CYP2W1Q8TAV3 490 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 LENG9Q96B70 501 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 BLZF1Q9H2G9 400 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 CUEDC2Q9H467 287 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 RMI1Q9H9A7 625 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 RRAGCQ9HB90 399 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 RNF146Q9NTX7 359 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 MAP3K20Q9NYL2 800 aaKnown RBP11.54□□□□□ -0.56
HERC4-207ENST00000460168 MAN1B1Q9UKM7 699 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 ZNF214Q9UL59 606 aaPredicted RBP11.54□□□□□ -0.56
HERC4-207ENST00000460168 ADAMTS5Q9UNA0 930 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 PPME1Q9Y570 386 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 A0A0G2JLL6 359 aaPredicted RBP11.54□□□□□ -0.56
HERC4-207ENST00000460168 TRAF5O00463 557 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 RPS6P62753 249 aaKnown RBP11.54□□□□□ -0.56
HERC4-207ENST00000460168 DPYDQ12882 1025 aa11.54□□□□□ -0.56
HERC4-207ENST00000460168 TMEM132BQ14DG7 1078 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms