RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 FANCBQ8NB91 859 aa26.2■■□□□ 1.78
PTPN4-207ENST00000460162 WNT8BQ93098 351 aa26.2■■□□□ 1.78
PTPN4-207ENST00000460162 GPR20Q99678 358 aa26.2■■□□□ 1.78
PTPN4-207ENST00000460162 PSTPIP2Q9H939 334 aa26.2■■□□□ 1.78
PTPN4-207ENST00000460162 RTEL1Q9NZ71 1219 aa26.2■■□□□ 1.78
PTPN4-207ENST00000460162 SPTBN5Q9NRC6 3674 aaKnown RBP26.19■■□□□ 1.78
PTPN4-207ENST00000460162 EMSYQ7Z589 1322 aa26.19■■□□□ 1.78
PTPN4-207ENST00000460162 C17orf102A2RUQ5 167 aa26.19■■□□□ 1.78
PTPN4-207ENST00000460162 EFCAB14O75071 495 aa26.19■■□□□ 1.78
PTPN4-207ENST00000460162 CDC45O75419 566 aa26.19■■□□□ 1.78
PTPN4-207ENST00000460162 IGFBP4P22692 258 aa26.19■■□□□ 1.78
PTPN4-207ENST00000460162 ZNF200P98182 395 aaPredicted RBP26.19■■□□□ 1.78
PTPN4-207ENST00000460162 HIC1Q14526 733 aa26.19■■□□□ 1.78
PTPN4-207ENST00000460162 ZNF618Q5T7W0 954 aa26.19■■□□□ 1.78
PTPN4-207ENST00000460162 SYNE3Q6ZMZ3 975 aa26.19■■□□□ 1.78
PTPN4-207ENST00000460162 RAB11FIP4Q86YS3 637 aa26.19■■□□□ 1.78
PTPN4-207ENST00000460162 GIMAP8Q8ND71 665 aaPredicted RBP26.19■■□□□ 1.78
PTPN4-207ENST00000460162 NEK1Q96PY6 1258 aa26.19■■□□□ 1.78
PTPN4-207ENST00000460162 BCAS3Q9H6U6 928 aa26.19■■□□□ 1.78
PTPN4-207ENST00000460162 SMIM10L2AP0DMW4 78 aa26.18■■□□□ 1.78
PTPN4-207ENST00000460162 SMIM10L2BP0DMW5 78 aa26.18■■□□□ 1.78
PTPN4-207ENST00000460162 APOA5Q6Q788 366 aa26.18■■□□□ 1.78
PTPN4-207ENST00000460162 GPRASP2Q96D09 838 aa26.18■■□□□ 1.78
PTPN4-207ENST00000460162 RBM28Q9NW13 759 aaKnown RBP26.18■■□□□ 1.78
PTPN4-207ENST00000460162 ZNF215Q9UL58 517 aaPredicted RBP26.18■■□□□ 1.78
PTPN4-207ENST00000460162 COL4A4P53420 1690 aaPredicted RBP26.18■■□□□ 1.78
PTPN4-207ENST00000460162 MICAL3Q7RTP6 2002 aa26.17■■□□□ 1.78
PTPN4-207ENST00000460162 CNTNAP5Q8WYK1 1306 aa26.17■■□□□ 1.78
PTPN4-207ENST00000460162 ABHD14A-ACY1A0A1B0GW23 586 aa26.17■■□□□ 1.78
PTPN4-207ENST00000460162 PPM1EQ8WY54 764 aa26.17■■□□□ 1.78
PTPN4-207ENST00000460162 SYMPKQ92797 1274 aaKnown RBP26.17■■□□□ 1.78
PTPN4-207ENST00000460162 ATP6V0A1Q93050 837 aa26.17■■□□□ 1.78
PTPN4-207ENST00000460162 CDHR1Q96JP9 859 aa26.17■■□□□ 1.78
PTPN4-207ENST00000460162 THEGQ9P2T0 379 aa26.17■■□□□ 1.78
PTPN4-207ENST00000460162 SPDYE3A6NKU9 549 aa26.16■■□□□ 1.78
PTPN4-207ENST00000460162 MBTPS1Q14703 1052 aa26.16■■□□□ 1.78
PTPN4-207ENST00000460162 TSGA10IPQ3SY00 556 aa26.16■■□□□ 1.78
PTPN4-207ENST00000460162 TJAP1Q5JTD0 557 aa26.16■■□□□ 1.78
PTPN4-207ENST00000460162 CCDC82Q8N4S0 544 aa26.16■■□□□ 1.78
PTPN4-207ENST00000460162 TTC28Q96AY4 2481 aa26.15■■□□□ 1.78
PTPN4-207ENST00000460162 hCG_1642624A0A1W2PR95 340 aa26.15■■□□□ 1.78
PTPN4-207ENST00000460162 TLL1O43897 1013 aa26.15■■□□□ 1.78
PTPN4-207ENST00000460162 CAND2O75155 1236 aa26.15■■□□□ 1.78
PTPN4-207ENST00000460162 TAP1Q03518 808 aa26.15■■□□□ 1.78
PTPN4-207ENST00000460162 KRT32Q14532 448 aa26.15■■□□□ 1.78
PTPN4-207ENST00000460162 DHX32Q7L7V1 743 aaKnown RBP26.15■■□□□ 1.78
PTPN4-207ENST00000460162 HEATR3Q7Z4Q2 680 aa26.15■■□□□ 1.78
PTPN4-207ENST00000460162 TEX2Q8IWB9 1127 aa26.15■■□□□ 1.78
PTPN4-207ENST00000460162 LGR5O75473 907 aa26.14■■□□□ 1.78
PTPN4-207ENST00000460162 GNAT1P11488 350 aa26.14■■□□□ 1.78
PTPN4-207ENST00000460162 THPOP40225 353 aa26.14■■□□□ 1.78
PTPN4-207ENST00000460162 DEFB103AP81534 67 aa26.14■■□□□ 1.78
PTPN4-207ENST00000460162 EXOSC10Q01780 885 aaKnown RBP26.14■■□□□ 1.78
PTPN4-207ENST00000460162 IKBKEQ14164 716 aa26.14■■□□□ 1.78
PTPN4-207ENST00000460162 UBE2SQ16763 222 aa26.14■■□□□ 1.78
PTPN4-207ENST00000460162 PPP1R18Q6NYC8 613 aa26.14■■□□□ 1.78
PTPN4-207ENST00000460162 TRIM50Q86XT4 487 aa26.14■■□□□ 1.78
PTPN4-207ENST00000460162 ATXN2LQ8WWM7 1075 aaKnown RBP26.14■■□□□ 1.78
PTPN4-207ENST00000460162 RNPEPQ9H4A4 650 aa26.14■■□□□ 1.78
PTPN4-207ENST00000460162 EHMT1Q9H9B1 1298 aa26.14■■□□□ 1.78
PTPN4-207ENST00000460162 PRDM6Q9NQX0 595 aa26.14■■□□□ 1.78
PTPN4-207ENST00000460162 RSPH10B2B2RC85 870 aa26.13■■□□□ 1.77
PTPN4-207ENST00000460162 TREHO43280 583 aa26.13■■□□□ 1.77
PTPN4-207ENST00000460162 RSPH10BP0C881 870 aa26.13■■□□□ 1.77
PTPN4-207ENST00000460162 KCNA2P16389 499 aa26.13■■□□□ 1.77
PTPN4-207ENST00000460162 POU3F3P20264 500 aaPredicted RBP26.13■■□□□ 1.77
PTPN4-207ENST00000460162 RTN1Q16799 776 aa26.13■■□□□ 1.77
PTPN4-207ENST00000460162 TCTN1Q2MV58 587 aa26.13■■□□□ 1.77
PTPN4-207ENST00000460162 UBIAD1Q9Y5Z9 338 aa26.13■■□□□ 1.77
PTPN4-207ENST00000460162 KAT6AQ92794 2004 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 hCG_1984214I3L0E3 225 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 ZBTB43O43298 467 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 ARHGEF15O94989 841 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 GJB5O95377 273 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 ITGB5P18084 799 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 RCAN1P53805 252 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 SP4Q02446 784 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 MTMR1Q13613 665 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 CCDC85BQ15834 202 aaPredicted RBP26.12■■□□□ 1.77
PTPN4-207ENST00000460162 ADCK5Q3MIX3 580 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 UTP14CQ5TAP6 766 aaKnown RBP26.12■■□□□ 1.77
PTPN4-207ENST00000460162 WWC2Q6AWC2 1192 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 RASEFQ8IZ41 740 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 ZNF713Q8N859 430 aaPredicted RBP26.12■■□□□ 1.77
PTPN4-207ENST00000460162 TCEANC2Q96MN5 208 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 PCDHA6Q9UN73 950 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 PCDHA8Q9Y5H6 950 aa26.12■■□□□ 1.77
PTPN4-207ENST00000460162 SIP14410 1827 aa26.11■■□□□ 1.77
PTPN4-207ENST00000460162 GTPBP6O43824 516 aaPredicted RBP26.11■■□□□ 1.77
PTPN4-207ENST00000460162 HMGB1P09429 215 aaKnown RBP26.11■■□□□ 1.77
PTPN4-207ENST00000460162 TCF7P36402 384 aaPredicted RBP26.11■■□□□ 1.77
PTPN4-207ENST00000460162 ZBED2Q9BTP6 218 aa26.11■■□□□ 1.77
PTPN4-207ENST00000460162 CERS4Q9HA82 394 aa26.11■■□□□ 1.77
PTPN4-207ENST00000460162 BRPF3Q9ULD4 1205 aa26.11■■□□□ 1.77
PTPN4-207ENST00000460162 TELO2Q9Y4R8 837 aa26.11■■□□□ 1.77
PTPN4-207ENST00000460162 EPOPA6NHQ4 379 aa26.1■■□□□ 1.77
PTPN4-207ENST00000460162 MAFGO15525 162 aa26.1■■□□□ 1.77
PTPN4-207ENST00000460162 ATP9AO75110 1047 aa26.1■■□□□ 1.77
PTPN4-207ENST00000460162 NAPAP54920 295 aa26.1■■□□□ 1.77
PTPN4-207ENST00000460162 FUT2Q10981 343 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms