RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 EEF1GP26641 437 aaKnown RBP10.61□□□□□ -0.71
UFD1-205ENST00000459854 SCNN1DP51172 638 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 NOP14P78316 857 aaKnown RBP10.61□□□□□ -0.71
UFD1-205ENST00000459854 MRPS9P82933 396 aaKnown RBP10.61□□□□□ -0.71
UFD1-205ENST00000459854 GUCY2DQ02846 1103 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 MORC3Q14149 939 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 CC2D1AQ6P1N0 951 aaPredicted RBP10.61□□□□□ -0.71
UFD1-205ENST00000459854 MGARPQ8TDB4 240 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 ZNF512BQ96KM6 892 aaPredicted RBP10.61□□□□□ -0.71
UFD1-205ENST00000459854 OSBPL3Q9H4L5 887 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 USP40Q9NVE5 1235 aa10.61□□□□□ -0.71
UFD1-205ENST00000459854 UBE3CQ15386 1083 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 CTAGE3PQ8IX95 158 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 MRPL40Q9NQ50 206 aaKnown RBP10.6□□□□□ -0.71
UFD1-205ENST00000459854 DIS3Q9Y2L1 958 aaKnown RBP10.6□□□□□ -0.71
UFD1-205ENST00000459854 ZNF532Q9HCE3 1301 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 PFKFB1P16118 471 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 GEN1Q17RS7 908 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 SLC30A9Q6PML9 568 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 DIS3L2Q8IYB7 885 aaKnown RBP10.6□□□□□ -0.71
UFD1-205ENST00000459854 PDE6CP51160 858 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 NR1H3Q13133 447 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 TYW1BQ6NUM6 668 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 RRAGAQ7L523 313 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 SCYL3Q8IZE3 742 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 CCDC89Q8N998 374 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 MORC4Q8TE76 937 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.6□□□□□ -0.71
UFD1-205ENST00000459854 DSCC1Q9BVC3 393 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 VIPAS39Q9H9C1 493 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 MCM9Q9NXL9 1143 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 SPDYE3A6NKU9 549 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 ARHGEF9O43307 516 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 PYGBP11216 843 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 PDE6AP16499 860 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 STAT1P42224 750 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 CUL3Q13618 768 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 TEDDM1Q5T9Z0 273 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 SLC35F6Q8N357 371 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 AGBL3Q8NEM8 1001 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 TMEM60Q9H2L4 133 aa10.6□□□□□ -0.71
UFD1-205ENST00000459854 AATFQ9NY61 560 aaKnown RBP eCLIP10.6□□□□□ -0.71
UFD1-205ENST00000459854 GTPBP6O43824 516 aaPredicted RBP10.59□□□□□ -0.71
UFD1-205ENST00000459854 MYL1P05976 194 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 ATF2P15336 505 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 GCFC2P16383 781 aaKnown RBP10.59□□□□□ -0.71
UFD1-205ENST00000459854 EEF1DP29692 281 aaKnown RBP10.59□□□□□ -0.71
UFD1-205ENST00000459854 ELF1P32519 619 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 GARSP41250 739 aaKnown RBP10.59□□□□□ -0.71
UFD1-205ENST00000459854 MRPL12P52815 198 aaKnown RBP10.59□□□□□ -0.71
UFD1-205ENST00000459854 RASSF7Q02833 373 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 RSBN1LQ6PCB5 846 aaPredicted RBP10.59□□□□□ -0.71
UFD1-205ENST00000459854 ENAHQ8N8S7 591 aaPredicted RBP10.59□□□□□ -0.71
UFD1-205ENST00000459854 CACTINQ8WUQ7 758 aaKnown RBP10.59□□□□□ -0.71
UFD1-205ENST00000459854 CUEDC2Q9H467 287 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 DKC1O60832 514 aaKnown RBP eCLIP10.59□□□□□ -0.71
UFD1-205ENST00000459854 PTGER2P43116 358 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 KCNJ6P48051 423 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 CUL4AQ13619 759 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 C15orf52Q6ZUT6 534 aaKnown RBP10.59□□□□□ -0.71
UFD1-205ENST00000459854 FGD4Q96M96 766 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 GSDMAQ96QA5 445 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 NT5C3AQ9H0P0 336 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 PPP6R2O75170 966 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 MCAMP43121 646 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 BTDP43251 543 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 RANBP1P43487 201 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 KRT80Q6KB66 452 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 KIFC2Q96AC6 838 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 METTL14Q9HCE5 456 aaKnown RBP10.59□□□□□ -0.71
UFD1-205ENST00000459854 RTEL1Q9NZ71 1219 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 MRFAP1Q9Y605 127 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 SBF2Q86WG5 1849 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 SPAG7O75391 227 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 NR1I2O75469 434 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 H2AFZP0C0S5 128 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 H2AFVQ71UI9 128 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 KLC4Q9NSK0 619 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 IRAK4Q9NWZ3 460 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 HACL1Q9UJ83 578 aa10.59□□□□□ -0.71
UFD1-205ENST00000459854 ANO9A1A5B4 782 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 B4DLN1 442 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 STXBP3O00186 592 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 PFKFB2O60825 505 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 HEXIM1O94992 359 aaKnown RBP10.58□□□□□ -0.72
UFD1-205ENST00000459854 HARSP12081 509 aaKnown RBP10.58□□□□□ -0.72
UFD1-205ENST00000459854 KRT40Q6A162 431 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 GRAMD1AQ96CP6 724 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 VAT1LQ9HCJ6 419 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 KDM3AQ9Y4C1 1321 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 LY75O60449 1722 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 CCDC188H7C350 402 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 PGRMC1O00264 195 aaKnown RBP10.58□□□□□ -0.72
UFD1-205ENST00000459854 TTI1O43156 1089 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 FGFR2P21802 821 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 ADCY8P40145 1251 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 RNASE9P60153 205 aaKnown RBP10.58□□□□□ -0.72
UFD1-205ENST00000459854 MKRN3Q13064 507 aaKnown RBP10.58□□□□□ -0.72
UFD1-205ENST00000459854 PLCB4Q15147 1175 aa10.58□□□□□ -0.72
UFD1-205ENST00000459854 ZNF174Q15697 407 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms