RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 WNT8BQ93098 351 aa24.87■■□□□ 1.57
CPNE1-220ENST00000458038 MTA3Q9BTC8 594 aa24.87■■□□□ 1.57
CPNE1-220ENST00000458038 SPATA31C2B4DYI2 1134 aa24.86■■□□□ 1.57
CPNE1-220ENST00000458038 FIBPO43427 364 aa24.86■■□□□ 1.57
CPNE1-220ENST00000458038 AMHP03971 560 aa24.86■■□□□ 1.57
CPNE1-220ENST00000458038 LGALS2P05162 132 aa24.86■■□□□ 1.57
CPNE1-220ENST00000458038 KIF5BP33176 963 aa24.86■■□□□ 1.57
CPNE1-220ENST00000458038 MRPS9P82933 396 aaKnown RBP24.86■■□□□ 1.57
CPNE1-220ENST00000458038 IGDCC4Q8TDY8 1250 aa24.86■■□□□ 1.57
CPNE1-220ENST00000458038 CUL5Q93034 780 aa24.86■■□□□ 1.57
CPNE1-220ENST00000458038 SPZ1Q9BXG8 430 aa24.86■■□□□ 1.57
CPNE1-220ENST00000458038 C1QTNF1Q9BXJ1 281 aa24.86■■□□□ 1.57
CPNE1-220ENST00000458038 SIP14410 1827 aa24.86■■□□□ 1.57
CPNE1-220ENST00000458038 LINC01553A4QN01 128 aa24.85■■□□□ 1.57
CPNE1-220ENST00000458038 SGSM2O43147 1006 aa24.85■■□□□ 1.57
CPNE1-220ENST00000458038 SORBS3O60504 671 aa24.85■■□□□ 1.57
CPNE1-220ENST00000458038 HIC1Q14526 733 aa24.85■■□□□ 1.57
CPNE1-220ENST00000458038 TCTN1Q2MV58 587 aa24.85■■□□□ 1.57
CPNE1-220ENST00000458038 PLEKHG4Q58EX7 1191 aa24.85■■□□□ 1.57
CPNE1-220ENST00000458038 TMCO2Q7Z6W1 182 aaPredicted RBP24.85■■□□□ 1.57
CPNE1-220ENST00000458038 TMTC2Q8N394 836 aa24.85■■□□□ 1.57
CPNE1-220ENST00000458038 DBF4BQ8NFT6 615 aa24.85■■□□□ 1.57
CPNE1-220ENST00000458038 MAP4K1Q92918 833 aa24.85■■□□□ 1.57
CPNE1-220ENST00000458038 RRP36Q96EU6 259 aaKnown RBP24.85■■□□□ 1.57
CPNE1-220ENST00000458038 SENP7Q9BQF6 1050 aa24.85■■□□□ 1.57
CPNE1-220ENST00000458038 LZTS2Q9BRK4 669 aa24.85■■□□□ 1.57
CPNE1-220ENST00000458038 SENP2Q9HC62 589 aa24.85■■□□□ 1.57
CPNE1-220ENST00000458038 SMIM10L2AP0DMW4 78 aa24.84■■□□□ 1.57
CPNE1-220ENST00000458038 SMIM10L2BP0DMW5 78 aa24.84■■□□□ 1.57
CPNE1-220ENST00000458038 GNAQP50148 359 aa24.84■■□□□ 1.57
CPNE1-220ENST00000458038 PCNX4Q63HM2 1172 aa24.84■■□□□ 1.57
CPNE1-220ENST00000458038 GIMAP8Q8ND71 665 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-220ENST00000458038 CTCFLQ8NI51 663 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-220ENST00000458038 GPKOWQ92917 476 aaPredicted RBP eCLIP24.84■■□□□ 1.57
CPNE1-220ENST00000458038 RNPEPQ9H4A4 650 aa24.84■■□□□ 1.57
CPNE1-220ENST00000458038 SUGCTQ9HAC7 445 aa24.84■■□□□ 1.57
CPNE1-220ENST00000458038 ZNF215Q9UL58 517 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-220ENST00000458038 COL4A4P53420 1690 aaPredicted RBP24.84■■□□□ 1.57
CPNE1-220ENST00000458038 PIK3CDO00329 1044 aa24.83■■□□□ 1.57
CPNE1-220ENST00000458038 DDAH1O94760 285 aa24.83■■□□□ 1.57
CPNE1-220ENST00000458038 HTRA4P83105 476 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-220ENST00000458038 MKRN4PQ13434 485 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-220ENST00000458038 CYFIP1Q7L576 1253 aa24.83■■□□□ 1.57
CPNE1-220ENST00000458038 SMARCC2Q8TAQ2 1214 aa24.83■■□□□ 1.57
CPNE1-220ENST00000458038 GDPD5Q8WTR4 605 aa24.83■■□□□ 1.57
CPNE1-220ENST00000458038 SEPT8Q92599 483 aa24.83■■□□□ 1.57
CPNE1-220ENST00000458038 SAMD11Q96NU1 681 aa24.83■■□□□ 1.57
CPNE1-220ENST00000458038 NECAB3Q96P71 396 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-220ENST00000458038 SEC63Q9UGP8 760 aaKnown RBP24.83■■□□□ 1.57
CPNE1-220ENST00000458038 CASC1Q6TDU7 716 aa24.82■■□□□ 1.56
CPNE1-220ENST00000458038 SPRED2Q7Z698 418 aa24.82■■□□□ 1.56
CPNE1-220ENST00000458038 MB21D2Q8IYB1 491 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-220ENST00000458038 ZFP91Q96JP5 570 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-220ENST00000458038 GPR20Q99678 358 aa24.82■■□□□ 1.56
CPNE1-220ENST00000458038 TREHO43280 583 aa24.81■■□□□ 1.56
CPNE1-220ENST00000458038 ANTXR2P58335 489 aa24.81■■□□□ 1.56
CPNE1-220ENST00000458038 FAM117BQ6P1L5 589 aa24.81■■□□□ 1.56
CPNE1-220ENST00000458038 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.81■■□□□ 1.561e-8■■□□□ 11.7
CPNE1-220ENST00000458038 NLRX1Q86UT6 975 aa24.81■■□□□ 1.56
CPNE1-220ENST00000458038 ZNF654Q8IZM8 581 aa24.81■■□□□ 1.56
CPNE1-220ENST00000458038 MYOCDQ8IZQ8 938 aa24.81■■□□□ 1.56
CPNE1-220ENST00000458038 CDHR1Q96JP9 859 aa24.81■■□□□ 1.56
CPNE1-220ENST00000458038 RTEL1Q9NZ71 1219 aa24.81■■□□□ 1.56
CPNE1-220ENST00000458038 MTUS1Q9ULD2 1270 aa24.81■■□□□ 1.56
CPNE1-220ENST00000458038 DOCK5Q9H7D0 1870 aa24.81■■□□□ 1.56
CPNE1-220ENST00000458038 FBXO22Q8NEZ5 403 aa24.8■■□□□ 1.56
CPNE1-220ENST00000458038 SP7Q8TDD2 431 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-220ENST00000458038 APBB2Q92870 758 aa24.8■■□□□ 1.56
CPNE1-220ENST00000458038 BCAS3Q9H6U6 928 aa24.8■■□□□ 1.56
CPNE1-220ENST00000458038 LY9Q9HBG7 655 aa24.8■■□□□ 1.56
CPNE1-220ENST00000458038 TAF6LQ9Y6J9 622 aa24.8■■□□□ 1.56
CPNE1-220ENST00000458038 SEMA3FQ13275 785 aa24.79■■□□□ 1.56
CPNE1-220ENST00000458038 PIBF1Q8WXW3 757 aa24.79■■□□□ 1.56
CPNE1-220ENST00000458038 TOP1MTQ969P6 601 aa24.79■■□□□ 1.56
CPNE1-220ENST00000458038 TMEM87BQ96K49 555 aa24.79■■□□□ 1.56
CPNE1-220ENST00000458038 SETD4Q9NVD3 440 aa24.79■■□□□ 1.56
CPNE1-220ENST00000458038 RBM8AQ9Y5S9 174 aaKnown RBP24.79■■□□□ 1.56
CPNE1-220ENST00000458038 NRCAMQ92823 1304 aa24.79■■□□□ 1.56
CPNE1-220ENST00000458038 MEIS2O14770 477 aa24.78■■□□□ 1.56
CPNE1-220ENST00000458038 CALM1P0DP23 149 aa24.78■■□□□ 1.56
CPNE1-220ENST00000458038 CALM2P0DP24 149 aa24.78■■□□□ 1.56
CPNE1-220ENST00000458038 CALM3P0DP25 149 aa24.78■■□□□ 1.56
CPNE1-220ENST00000458038 MCM5P33992 734 aa24.78■■□□□ 1.56
CPNE1-220ENST00000458038 ADAM17P78536 824 aa24.78■■□□□ 1.56
CPNE1-220ENST00000458038 FAM26DQ5JW98 314 aa24.78■■□□□ 1.56
CPNE1-220ENST00000458038 USP17L6PQ6QN14 398 aa24.78■■□□□ 1.56
CPNE1-220ENST00000458038 GPRASP2Q96D09 838 aa24.78■■□□□ 1.56
CPNE1-220ENST00000458038 SUPT16HQ9Y5B9 1047 aaKnown RBP24.78■■□□□ 1.56
CPNE1-220ENST00000458038 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-220ENST00000458038 PTPROQ16827 1216 aa24.77■■□□□ 1.56
CPNE1-220ENST00000458038 RPAINQ86UA6 219 aa24.77■■□□□ 1.56
CPNE1-220ENST00000458038 YME1L1Q96TA2 773 aa24.77■■□□□ 1.56
CPNE1-220ENST00000458038 PSTPIP2Q9H939 334 aa24.77■■□□□ 1.56
CPNE1-220ENST00000458038 CCDC69A6NI79 296 aa24.76■■□□□ 1.55
CPNE1-220ENST00000458038 PRC1O43663 620 aa24.76■■□□□ 1.55
CPNE1-220ENST00000458038 NFXL1Q6ZNB6 911 aa24.76■■□□□ 1.55
CPNE1-220ENST00000458038 MRPL38Q96DV4 380 aaKnown RBP24.76■■□□□ 1.55
CPNE1-220ENST00000458038 UBE2ZQ9H832 354 aaPredicted RBP24.76■■□□□ 1.55
CPNE1-220ENST00000458038 MAFGO15525 162 aa24.75■■□□□ 1.55
CPNE1-220ENST00000458038 LIFRP42702 1097 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms