RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 MSH4O15457 936 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 TAL1P17542 331 aaPredicted RBP10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 ERVK-9P63128 1117 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 ERVK-24P63145 666 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 FSTL1Q12841 308 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 PPP2R5CQ13362 524 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 PGM5Q15124 567 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 GNPTABQ3T906 1256 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 SPECC1Q5M775 1068 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 RGMBQ6NW40 437 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 USP49Q70CQ1 688 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 NLRX1Q86UT6 975 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 VSIG10LQ86VR7 867 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 RASAL3Q86YV0 1011 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 CKAP2LQ8IYA6 745 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 ABRAQ8N0Z2 381 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 ANKRD35Q8N283 1001 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 GPRC5AQ8NFJ5 357 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 SPATA20Q8TB22 786 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 FAM200AQ8TCP9 573 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 DHX58Q96C10 678 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 GSDMAQ96QA5 445 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 MOV10L1Q9BXT6 1211 aaKnown RBP10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 JADE2Q9NQC1 790 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 TBC1D22BQ9NU19 505 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 RMND1Q9NWS8 449 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 BTBD7Q9P203 1132 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 COL20A1Q9P218 1284 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 RBPJLQ9UBG7 517 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 TCEAL9Q9UHQ7 104 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 DACH1Q9UI36 760 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 TLL2Q9Y6L7 1015 aa10.02□□□□□ -0.81
CDC42EP3-204ENST00000457889 IPO5O00410 1097 aaKnown RBP10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 STRNO43815 780 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 GTPBP6O43824 516 aaPredicted RBP10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 GAS7O60861 476 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 CNMDO75829 334 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 PSMD10O75832 226 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 TOMM70O94826 608 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 NR3C2P08235 984 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 SLC10A3P09131 477 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 NUDT7P0C024 238 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 ZNF157P51786 506 aaPredicted RBP10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 MDM2Q00987 491 aaPredicted RBP10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 FMR1Q06787 632 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 SPIRE1Q08AE8 756 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 SREBF2Q12772 1141 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 MTMR1Q13613 665 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 KCTD2Q14681 263 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 KARSQ15046 597 aaKnown RBP10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 FAM110CQ1W6H9 321 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 UVSSAQ2YD98 709 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 TMEM119Q4V9L6 283 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 LRCH2Q5VUJ6 765 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 PDXDC2PQ6P474 469 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 CNNM4Q6P4Q7 775 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 NCAPG2Q86XI2 1143 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 PDILTQ8N807 584 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 RDM1Q8NG50 284 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 SNX29Q8TEQ0 813 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 SMARCE1Q969G3 411 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 INPP4AQ96PE3 977 aaPredicted RBP10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 BPIFA3Q9BQP9 254 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 ZNF577Q9BSK1 485 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 PAGR1Q9BTK6 254 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 POLR3CQ9BUI4 534 aaPredicted RBP10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 TEKT3Q9BXF9 490 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 GRPEL1Q9HAV7 217 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 KBTBD4Q9NVX7 518 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 SERTAD1Q9UHV2 236 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 VAV3Q9UKW4 847 aa10.01□□□□□ -0.81
CDC42EP3-204ENST00000457889 A0A087X0B3 334 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 TMEM88BA6NKF7 163 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 STK25O00506 426 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 KIF3CO14782 793 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 EIF3JO75822 258 aaKnown RBP10□□□□□ -0.81
CDC42EP3-204ENST00000457889 FCER1AP12319 257 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 ITGB5P18084 799 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 PLCG1P19174 1290 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 ERCC3P19447 782 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 EIF2AK2P19525 551 aaKnown RBP10□□□□□ -0.81
CDC42EP3-204ENST00000457889 EDNRBP24530 442 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 RPA1P27694 616 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 SFNP31947 248 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 SARSP49591 514 aaKnown RBP10□□□□□ -0.81
CDC42EP3-204ENST00000457889 POTEEQ6S8J3 1075 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 GAS2L3Q86XJ1 694 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 FAM133AQ8N9E0 248 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 ANP32BQ92688 251 aaKnown RBP10□□□□□ -0.81
CDC42EP3-204ENST00000457889 CCDC47Q96A33 483 aaKnown RBP10□□□□□ -0.81
CDC42EP3-204ENST00000457889 PAGE5Q96GU1 130 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 TAAR1Q96RJ0 339 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 MMTAG2Q9BU76 263 aaKnown RBP10□□□□□ -0.81
CDC42EP3-204ENST00000457889 TUFT1Q9NNX1 390 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 KCNH7Q9NS40 1196 aa10□□□□□ -0.81
CDC42EP3-204ENST00000457889 ZBTB4Q9P1Z0 1013 aaPredicted RBP10□□□□□ -0.81
CDC42EP3-204ENST00000457889 DNAJC25-GNG10A0A024R161 153 aa9.99□□□□□ -0.81
CDC42EP3-204ENST00000457889 MAPK4P31152 587 aa9.99□□□□□ -0.81
CDC42EP3-204ENST00000457889 ICAM3P32942 547 aa9.99□□□□□ -0.81
CDC42EP3-204ENST00000457889 CCT6AP40227 531 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms