RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 TCP11L1Q9NUJ3 509 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 BCS1LQ9Y276 419 aa14.98□□□□□ -0.01
TOP3B-213ENST00000457179 KRT14P02533 472 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 HOXA13P31271 388 aaPredicted RBP14.97□□□□□ -0.01
TOP3B-213ENST00000457179 BAG6P46379 1132 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 JAG1P78504 1218 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 SLFN13Q68D06 897 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 ELOA2Q8IYF1 753 aaPredicted RBP14.97□□□□□ -0.01
TOP3B-213ENST00000457179 ZHX3Q9H4I2 956 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 JMJD4Q9H9V9 463 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 SLC40A1Q9NP59 571 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 TMOD2Q9NZR1 351 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 FAM184BQ9ULE4 1060 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 PCDHA1Q9Y5I3 950 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 KCNJ18B7U540 433 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 GOLGA8KD6RF30 607 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 PDE2AO00408 941 aaPredicted RBP14.97□□□□□ -0.01
TOP3B-213ENST00000457179 GABPAQ06546 454 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 KCNJ12Q14500 433 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 DLGAP5Q15398 846 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 ABCB5Q2M3G0 1257 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 PRAMEF18Q5VWM3 479 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 NAA35Q5VZE5 725 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 SH3GL2Q99962 352 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 FZD1Q9UP38 647 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 GJA3Q9Y6H8 435 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 LY75O60449 1722 aa14.97□□□□□ -0.01
TOP3B-213ENST00000457179 GTPBP6O43824 516 aaPredicted RBP14.96□□□□□ -0.01
TOP3B-213ENST00000457179 PEX19P40855 299 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 COPB1P53618 953 aaKnown RBP14.96□□□□□ -0.01
TOP3B-213ENST00000457179 CDKAL1Q5VV42 579 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 HHIPL2Q6UWX4 724 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 MICALCLQ6ZW33 695 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 NEK8Q86SG6 692 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 PSMB7Q99436 277 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 MYO1AQ9UBC5 1043 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 DDX20Q9UHI6 824 aaKnown RBP14.96□□□□□ -0.01
TOP3B-213ENST00000457179 OPA1O60313 960 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 ADCY7P51828 1080 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 CCDC70Q6NSX1 233 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 TRIM47Q96LD4 638 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 ZDHHC15Q96MV8 337 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.96□□□□□ -0.01
TOP3B-213ENST00000457179 DISC1Q9NRI5 854 aa14.96□□□□□ -0.01
TOP3B-213ENST00000457179 F5H6K3 240 aa14.96□□□□□ -0.02
TOP3B-213ENST00000457179 SLC37A4O43826 429 aa14.96□□□□□ -0.02
TOP3B-213ENST00000457179 PPP1R11O60927 126 aaPredicted RBP14.96□□□□□ -0.02
TOP3B-213ENST00000457179 GBP2P32456 591 aaPredicted RBP14.96□□□□□ -0.02
TOP3B-213ENST00000457179 NAP1L1P55209 391 aaKnown RBP14.96□□□□□ -0.02
TOP3B-213ENST00000457179 HDLBPQ00341 1268 aaKnown RBP14.96□□□□□ -0.02
TOP3B-213ENST00000457179 KLRC3Q07444 240 aa14.96□□□□□ -0.02
TOP3B-213ENST00000457179 ZNF543Q08ER8 600 aa14.96□□□□□ -0.02
TOP3B-213ENST00000457179 KIAA1328Q86T90 577 aa14.96□□□□□ -0.02
TOP3B-213ENST00000457179 TSEN2Q8NCE0 465 aaKnown RBP14.96□□□□□ -0.02
TOP3B-213ENST00000457179 LRRC15Q8TF66 581 aa14.96□□□□□ -0.02
TOP3B-213ENST00000457179 CDK5RAP3Q96JB5 506 aa14.96□□□□□ -0.02
TOP3B-213ENST00000457179 TACO1Q9BSH4 297 aaKnown RBP14.96□□□□□ -0.02
TOP3B-213ENST00000457179 PSTPIP2Q9H939 334 aa14.96□□□□□ -0.02
TOP3B-213ENST00000457179 EPN1Q9Y6I3 576 aaPredicted RBP14.96□□□□□ -0.02
TOP3B-213ENST00000457179 MACROD2A1Z1Q3 448 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 TARSL2A2RTX5 802 aaKnown RBP14.95□□□□□ -0.02
TOP3B-213ENST00000457179 CALRP27797 417 aaKnown RBP14.95□□□□□ -0.02
TOP3B-213ENST00000457179 CACNB1Q02641 598 aaPredicted RBP14.95□□□□□ -0.02
TOP3B-213ENST00000457179 CKAP4Q07065 602 aaKnown RBP14.95□□□□□ -0.02
TOP3B-213ENST00000457179 SNCBQ16143 134 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 RNPC3Q96LT9 517 aaKnown RBP14.95□□□□□ -0.02
TOP3B-213ENST00000457179 PCMTD1Q96MG8 357 aaPredicted RBP14.95□□□□□ -0.02
TOP3B-213ENST00000457179 VCPKMTQ9H867 229 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 DMGDHQ9UI17 866 aaKnown RBP14.95□□□□□ -0.02
TOP3B-213ENST00000457179 HSF2BPO75031 334 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 NDUFA10O95299 355 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 EZRP15311 586 aaKnown RBP14.95□□□□□ -0.02
TOP3B-213ENST00000457179 PLCG1P19174 1290 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 CCNHP51946 323 aaPredicted RBP14.95□□□□□ -0.02
TOP3B-213ENST00000457179 NNTQ13423 1086 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 NBPF9Q3BBW0 867 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 NAALADL2Q58DX5 795 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 CCDC174Q6PII3 467 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 FMNL3Q8IVF7 1028 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 C4orf32Q8N8J7 132 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 ACER1Q8TDN7 264 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 ZNF473Q8WTR7 871 aaKnown RBP14.95□□□□□ -0.02
TOP3B-213ENST00000457179 SPZ1Q9BXG8 430 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 ZMYND12Q9H0C1 365 aa14.95□□□□□ -0.02
TOP3B-213ENST00000457179 REXO2Q9Y3B8 237 aaKnown RBP14.95□□□□□ -0.02
TOP3B-213ENST00000457179 LSP1P33241 339 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 RRP1BQ14684 758 aaKnown RBP14.94□□□□□ -0.02
TOP3B-213ENST00000457179 CABP7Q86V35 215 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 CTAGE1Q96RT6 745 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 CCDC88AQ3V6T2 1871 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 A0A1B0GUA9 196 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 OR52Z1P0C646 297 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 SMTNP53814 917 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 ASIC1P78348 528 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 MAP2K1Q02750 393 aaPredicted RBP14.94□□□□□ -0.02
TOP3B-213ENST00000457179 DGKZQ13574 1117 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 PRKG1Q13976 671 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 QRICH1Q2TAL8 776 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 TCP11X2Q5H9J9 407 aa14.94□□□□□ -0.02
TOP3B-213ENST00000457179 ZNF658Q5TYW1 1059 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms