RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 AMNQ9BXJ7 453 aa4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 ASPSCR1Q9BZE9 553 aa4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 PSTPIP2Q9H939 334 aa4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 CPSF3Q9UKF6 684 aaKnown RBP4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 WDR64B1ANS9 1081 aa4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 TNPO2O14787 897 aaKnown RBP4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 RAPGEF3O95398 923 aa4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 CALB1P05937 261 aa4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 IBSPP21815 317 aaPredicted RBP4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 IRX1P78414 480 aaPredicted RBP4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 TBC1D9BQ66K14 1250 aa4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 EFL1Q7Z2Z2 1120 aaKnown RBP4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 KLHL7Q8IXQ5 586 aa4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 FBXO18Q8NFZ0 1043 aa4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 LARP4BQ92615 738 aaKnown RBP4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 TSC22D3Q99576 134 aa4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 INO80BQ9C086 356 aaPredicted RBP4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 DDX25Q9UHL0 483 aaKnown RBP4.34□□□□□ -1.72
PPP1R9A-208ENST00000456331 ADAMTS12P58397 1594 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 FAM187AA6NFU0 413 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 FOXO3O43524 673 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SPAG6O75602 509 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 ESRRAP11474 423 aaPredicted RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 TNFAIP2Q03169 654 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 GOLGA8FQ08AF8 430 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 GOLGA8DPQ0D2H9 430 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 TFDP2Q14188 446 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 NXNQ6DKJ4 435 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 POTEAQ6S8J7 498 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 GPBP1Q86WP2 473 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZNF654Q8IZM8 581 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 TRIML2Q8N7C3 387 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 TCP11Q8WWU5 503 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 FAM167AQ96KS9 214 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 TUBGCP2Q9BSJ2 902 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 ATP6V0A4Q9HBG4 840 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 DDX56Q9NY93 547 aaKnown RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZNF215Q9UL58 517 aaPredicted RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 NEO1Q92859 1461 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 U2AF2P26368 475 aaKnown RBP eCLIP4.33□□□□□ -1.721e-6■■■□□ 14.9
PPP1R9A-208ENST00000456331 PCYT1AP49585 367 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 KIF22Q14807 665 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 PSMD6Q15008 389 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 CYTH1Q15438 398 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 RARS2Q5T160 578 aaKnown RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 GRAMD4Q6IC98 578 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 FANCBQ8NB91 859 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 TTC17Q96AE7 1141 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SLC52A2Q9HAB3 445 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 NSMCE4AQ9NXX6 385 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 APOBEC2Q9Y235 224 aaKnown RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 RRP15Q9Y3B9 282 aaKnown RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 CDK12Q9NYV4 1490 aaPredicted RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 ATP7AQ04656 1500 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 H0YIN7 160 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 M0R3G1 203 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 DEAF1O75398 565 aaPredicted RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 MYL7Q01449 175 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 PPARAQ07869 468 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 DHX34Q14147 1143 aaKnown RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 MIS18BP1Q6P0N0 1132 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SESTD1Q86VW0 696 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 MIGA1Q8NAN2 632 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SH3GL3Q99963 347 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 THUMPD2Q9BTF0 503 aaKnown RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 CCDC87Q9NVE4 849 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 NSFL1CQ9UNZ2 370 aaKnown RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 H0Y626 953 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 TRIM16O95361 564 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 PFKFB1P16118 471 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 RAP1GDS1P52306 607 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SNX1Q13596 522 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 KHDRBS2Q5VWX1 349 aaKnown RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 C8orf58Q8NAV2 365 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SLF1Q9BQI6 1058 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SLITRK6Q9H5Y7 841 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 XAB2Q9HCS7 855 aaKnown RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SMG5Q9UPR3 1016 aaKnown RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SAMD9LQ8IVG5 1584 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 FAM83GA6ND36 823 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 GSTA4O15217 222 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 FMNL1O95466 1100 aaPredicted RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 MT-ND3P03897 115 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 CLTAP09496 248 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 GUCY2CP25092 1073 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SYCP2LQ5T4T6 812 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 ARMCX5Q6P1M9 558 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 DPH6Q7L8W6 267 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 U2AF1L4Q8WU68 220 aaKnown RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 P2RX5Q93086 422 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 MAGOHBQ96A72 148 aaKnown RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SCYL1Q96KG9 808 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 ZMYND12Q9H0C1 365 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 ALDH8A1Q9H2A2 487 aaPredicted RBP4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SPTLC3Q9NUV7 552 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 PCDHA4Q9UN74 947 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 SLFN14P0C7P3 912 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 NR1D1P20393 614 aa4.33□□□□□ -1.72
PPP1R9A-208ENST00000456331 LIFRP42702 1097 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms