RNA–Protein interactions for RNA: ENST00000455953.1

NCBP2-208, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 5

Gene NCBP2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-208ENST00000455953 ADAMTS5Q9UNA0 930 aa8.37□□□□□ -1.07
NCBP2-208ENST00000455953 TACC3Q9Y6A5 838 aa8.37□□□□□ -1.07
NCBP2-208ENST00000455953 LTBP2Q14767 1821 aa8.37□□□□□ -1.07
NCBP2-208ENST00000455953 CCDC171Q6TFL3 1326 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 DUSP11O75319 330 aaKnown RBP8.36□□□□□ -1.07
NCBP2-208ENST00000455953 PGK1P00558 417 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 CLTBP09497 229 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 TOP1P11387 765 aaKnown RBP8.36□□□□□ -1.07
NCBP2-208ENST00000455953 NT5C2P49902 561 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 PDE1AP54750 535 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 TRDNQ13061 729 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 IMMTQ16891 758 aaKnown RBP8.36□□□□□ -1.07
NCBP2-208ENST00000455953 ZNF792Q3KQV3 632 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 LRIT3Q3SXY7 679 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 TRIM60Q495X7 471 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 RCSD1Q6JBY9 416 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 NSMFQ6X4W1 530 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 CCDC129Q6ZRS4 1044 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 SIAH1Q8IUQ4 282 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 SLC17A8Q8NDX2 589 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 TPCN2Q8NHX9 752 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 RUFY2Q8WXA3 655 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 GMCL1Q96IK5 515 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 CALR3Q96L12 384 aaKnown RBP8.36□□□□□ -1.07
NCBP2-208ENST00000455953 TRERF1Q96PN7 1200 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 EPB41L4AQ9HCS5 686 aaPredicted RBP8.36□□□□□ -1.07
NCBP2-208ENST00000455953 TMEM39AQ9NV64 488 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 CTNNA3Q9UI47 895 aa8.36□□□□□ -1.07
NCBP2-208ENST00000455953 A0A1W2PQ45 241 aaPredicted RBP8.35□□□□□ -1.07
NCBP2-208ENST00000455953 A0A1W2PQY0 241 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 ERICH2A1L162 156 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 PTPDC1A2A3K4 754 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 PALM3A6NDB9 673 aaPredicted RBP8.35□□□□□ -1.07
NCBP2-208ENST00000455953 CDK2AP1O14519 115 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 ORC4O43929 436 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 ATP4AP20648 1035 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 EPHA4P54764 986 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 ACVR2BQ13705 512 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 ZNF385CQ66K41 422 aaPredicted RBP8.35□□□□□ -1.07
NCBP2-208ENST00000455953 KCTD1Q719H9 257 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 ARMCX2Q7L311 632 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 CHD1LQ86WJ1 897 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 TRPV1Q8NER1 839 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 UBAC1Q9BSL1 405 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 NIFKQ9BYG3 293 aaKnown RBP8.35□□□□□ -1.07
NCBP2-208ENST00000455953 KAT14Q9H8E8 782 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 PHF24Q9UPV7 400 aa8.35□□□□□ -1.07
NCBP2-208ENST00000455953 MAFBQ9Y5Q3 323 aaPredicted RBP8.35□□□□□ -1.07
NCBP2-208ENST00000455953 SYNRGQ9UMZ2 1314 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 IGKV6D-41A0A0C4DH26 115 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 A0A0U1RQG5 324 aaPredicted RBP8.34□□□□□ -1.07
NCBP2-208ENST00000455953 SMIM22K7EJ46 135 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 PLA2G6O60733 806 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 CABYRO75952 493 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 DKK1O94907 266 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 ACLYP53396 1101 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 HAND2P61296 217 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 TNFAIP2Q03169 654 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 FPGSQ05932 587 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 ALX1Q15699 326 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 CCDC144BQ3MJ40 725 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 TBCELQ5QJ74 424 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 AKNAD1Q5T1N1 836 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 CWC27Q6UX04 472 aaKnown RBP8.34□□□□□ -1.07
NCBP2-208ENST00000455953 MAMDC4Q6UXC1 1216 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 TMEM199Q8N511 208 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 OTUD7AQ8TE49 926 aaPredicted RBP8.34□□□□□ -1.07
NCBP2-208ENST00000455953 RNPC3Q96LT9 517 aaKnown RBP8.34□□□□□ -1.07
NCBP2-208ENST00000455953 SEZ6LQ9BYH1 1024 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 PPP1R12CQ9BZL4 782 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 CNNM2Q9H8M5 875 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 SCHIP1Q9P0W5 487 aaPredicted RBP8.34□□□□□ -1.07
NCBP2-208ENST00000455953 ANAPC4Q9UJX5 808 aa8.34□□□□□ -1.07
NCBP2-208ENST00000455953 DNAH12Q6ZR08 3092 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 ZMYM6O95789 1325 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 ICAM1P05362 532 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 HSPD1P10809 573 aaKnown RBP8.33□□□□□ -1.08
NCBP2-208ENST00000455953 TLE2Q04725 743 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 SRSF11Q05519 484 aaKnown RBP8.33□□□□□ -1.08
NCBP2-208ENST00000455953 TRAF1Q13077 416 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 NMIQ13287 307 aaPredicted RBP8.33□□□□□ -1.08
NCBP2-208ENST00000455953 PPIGQ13427 754 aaKnown RBP eCLIP8.33□□□□□ -1.087e-9■■■□□ 18.1
NCBP2-208ENST00000455953 SART3Q15020 963 aaKnown RBP8.33□□□□□ -1.08
NCBP2-208ENST00000455953 KCNA10Q16322 511 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 GPATCH4Q5T3I0 446 aaKnown RBP8.33□□□□□ -1.08
NCBP2-208ENST00000455953 SYDE2Q5VT97 1194 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 C1orf53Q5VUE5 145 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 LYPD4Q6UWN0 246 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 TRIM50Q86XT4 487 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 CCDC144CPQ8IYA2 1237 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 REPS2Q8NFH8 660 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 ZDHHC1Q8WTX9 485 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 BADQ92934 168 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 TTC14Q96N46 770 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 KRT23Q9C075 422 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 PRO3102Q9H379 93 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 DNAAF2Q9NVR5 837 aaKnown RBP8.33□□□□□ -1.08
NCBP2-208ENST00000455953 PRR12Q9ULL5 1215 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 RIPK3Q9Y572 518 aa8.33□□□□□ -1.08
NCBP2-208ENST00000455953 MYH7BA7E2Y1 1941 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms