RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 PTPDC1A2A3K4 754 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 POTEFA5A3E0 1075 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 POTEIP0CG38 1075 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 EPS8Q12929 822 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 AKAP4Q5JQC9 854 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 POTEEQ6S8J3 1075 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 NOSTRINQ8IVI9 506 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 NDUFAF2Q8N183 169 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 MS4A14Q96JA4 679 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 GOLPH3LQ9H4A5 285 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 SH3GLB2Q9NR46 395 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 CPSF1Q10570 1443 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 GSNP06396 782 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 MAGEA1P43355 309 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 MORF4L2Q15014 288 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 NEXMIFQ5QGS0 1516 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 MINDY4BA8MYZ0 360 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 TBC1D8O95759 1140 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 RPLP2P05387 115 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 CHMLP26374 656 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 SERPINB6P35237 376 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 ZBED6P86452 979 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 MECOMQ03112 1051 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 PSMD6Q15008 389 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 KHDRBS2Q5VWX1 349 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 SCYL3Q8IZE3 742 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 EPN1Q9Y6I3 576 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 LRRIQ3A6PVS8 624 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 DIAPH2O60879 1101 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 NR1I2O75469 434 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 TOM1L2Q6ZVM7 507 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 AGGF1Q8N302 714 aaeCLIP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 MRPL48Q96GC5 212 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 TRAIPQ9BWF2 469 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 GMEB1Q9Y692 573 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 NOS1P29475 1434 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 TBKBP1A7MCY6 615 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 FCGR1AP12314 374 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 PAX3P23760 479 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 BNC1Q01954 994 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 DHX34Q14147 1143 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 NEK10Q6ZWH5 1172 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 EIF1ADQ8N9N8 165 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 TUBGCP3Q96CW5 907 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 CHCHD3Q9NX63 227 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 GUCY2CP25092 1073 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 LDHAL6AQ6ZMR3 332 aa5.62□□□□□ -1.51
CSMD3-204ENST00000455883 CDV3Q9UKY7 258 aaKnown RBP5.62□□□□□ -1.51
CSMD3-204ENST00000455883 KPNA7A9QM74 516 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 HOXC6P09630 235 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 SCG2P13521 617 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 TAC1P20366 129 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 TKTP29401 623 aaKnown RBP5.61□□□□□ -1.51
CSMD3-204ENST00000455883 ZBTB41Q5SVQ8 909 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.61□□□□□ -1.51
CSMD3-204ENST00000455883 DCAF5Q96JK2 942 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 KDM4CQ9H3R0 1056 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 GGA2Q9UJY4 613 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 CARNS1A5YM72 827 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 KLHL41O60662 606 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 GSTA1P08263 222 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 HADHAP40939 763 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 RASGRF1Q13972 1273 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 CALCRLQ16602 461 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 KBTBD3Q8NAB2 608 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 FBXO18Q8NFZ0 1043 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 NUDT16Q96DE0 195 aaKnown RBP5.61□□□□□ -1.51
CSMD3-204ENST00000455883 CABP2Q9NPB3 220 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 CLTCL1P53675 1640 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 NCAPH2Q6IBW4 605 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 LRRC8EQ6NSJ5 796 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 PLEKHM2Q8IWE5 1019 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 ZFRQ96KR1 1074 aaKnown RBP5.61□□□□□ -1.51
CSMD3-204ENST00000455883 PUF60Q9UHX1 559 aaKnown RBP5.61□□□□□ -1.51
CSMD3-204ENST00000455883 RWDD2AQ9UIY3 292 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 PITPNM2Q9BZ72 1349 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 PNMA8CA0A1B0GUJ8 204 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 RHOXF2BP0C7M4 288 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 CSTF3Q12996 717 aaKnown RBP5.61□□□□□ -1.51
CSMD3-204ENST00000455883 SPDYCQ5MJ68 293 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 N4BP2L2Q92802 583 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-204ENST00000455883 RHOXF2Q9BQY4 288 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 NAT9Q9BTE0 207 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 MMADHCQ9H3L0 296 aaPredicted RBP5.61□□□□□ -1.51
CSMD3-204ENST00000455883 ATP8A2Q9NTI2 1148 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 STMN3Q9NZ72 180 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 PIK3R2O00459 728 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 SRGAP2CP0DJJ0 459 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 AK2P54819 239 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 TAB1Q15750 504 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 PPP1R18Q6NYC8 613 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 TXNDC2Q86VQ3 553 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 PDZD8Q8NEN9 1154 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 ATP2B4P23634 1241 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 CYP2C19P33261 490 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 BFSP2Q13515 415 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 GNPTABQ3T906 1256 aa5.61□□□□□ -1.51
CSMD3-204ENST00000455883 LIMA1Q9UHB6 759 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms