RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 LGALS2P05162 132 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 SUPT20HL2P0C7V6 817 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 ACRP10323 421 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 HOXC8P31273 242 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 SREBF1P36956 1147 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 CCL23P55773 120 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 AP3B2Q13367 1082 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 NEDD9Q14511 834 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 KIAA0753Q2KHM9 967 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 FAM47CQ5HY64 1035 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 NLRX1Q86UT6 975 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 TMEM199Q8N511 208 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 SCLYQ96I15 445 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 SLC26A6Q9BXS9 759 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 MLXIPQ9HAP2 919 aa13.57□□□□□ -0.24
TMEM56-202ENST00000455656 FOSP01100 380 aaPredicted RBP13.56□□□□□ -0.24
TMEM56-202ENST00000455656 RBL2Q08999 1139 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 SCRN1Q12765 414 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 PPIGQ13427 754 aaKnown RBP eCLIP13.56□□□□□ -0.24
TMEM56-202ENST00000455656 GPNMBQ14956 572 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 NPY5RQ15761 445 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 TRIM71Q2Q1W2 868 aaKnown RBP13.56□□□□□ -0.24
TMEM56-202ENST00000455656 C8orf34Q49A92 452 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 ZNF365Q70YC5 407 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 Q7L0L9 218 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 WNT8BQ93098 351 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 MXRA8Q9BRK3 442 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 ALG1Q9BT22 464 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 KATNAL1Q9BW62 490 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 GLT8D2Q9H1C3 349 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 IL23AQ9NPF7 189 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 TPCN1Q9ULQ1 816 aa13.56□□□□□ -0.24
TMEM56-202ENST00000455656 IGLV3-22A0A075B6J6 115 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 GSTTP1A0A1W2PQM5 241 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 ARP10275 920 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 AK2P54819 239 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 CHMP4BP1P59074 171 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 ARHGAP4P98171 946 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 ZNF200P98182 395 aaPredicted RBP13.55□□□□□ -0.24
TMEM56-202ENST00000455656 MTMR1Q13613 665 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 PTGISQ16647 500 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 JAKMIP3Q5VZ66 844 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 FAM109BQ6ICB4 259 aaPredicted RBP13.55□□□□□ -0.24
TMEM56-202ENST00000455656 TRAF7Q6Q0C0 670 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 TRIM50Q86XT4 487 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 RNPC3Q96LT9 517 aaKnown RBP13.55□□□□□ -0.24
TMEM56-202ENST00000455656 AIFM3Q96NN9 605 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 VPS54Q9P1Q0 977 aa13.55□□□□□ -0.24
TMEM56-202ENST00000455656 KAT6AQ92794 2004 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 FAM86B1E9PN63 330 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 H3BRB1 525 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 M0R2N6 131 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 MEIS1O00470 390 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 MAFGO15525 162 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 PFKFB2O60825 505 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 DTNBO60941 627 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 LARGE1O95461 756 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 CTDNEP1O95476 244 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 CYP3A4P08684 503 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 FAM86B2P0C5J1 330 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 IQCF3P0C7M6 154 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 ADAM17P78536 824 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 STK3Q13188 491 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 ITGB3BPQ13352 177 aaPredicted RBP13.54□□□□□ -0.24
TMEM56-202ENST00000455656 CEP55Q53EZ4 464 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 PSRC1Q6PGN9 363 aaPredicted RBP13.54□□□□□ -0.24
TMEM56-202ENST00000455656 RASGRP4Q8TDF6 673 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 HERVK_113Q902F9 699 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 CDHR1Q96JP9 859 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 TUT1Q9H6E5 874 aaKnown RBP13.54□□□□□ -0.24
TMEM56-202ENST00000455656 EHMT1Q9H9B1 1298 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 KCNH7Q9NS40 1196 aa13.54□□□□□ -0.24
TMEM56-202ENST00000455656 CXXC1Q9P0U4 656 aaPredicted RBP13.54□□□□□ -0.24
TMEM56-202ENST00000455656 NOP56O00567 594 aaKnown RBP13.53□□□□□ -0.24
TMEM56-202ENST00000455656 TCF7P36402 384 aaPredicted RBP13.53□□□□□ -0.24
TMEM56-202ENST00000455656 SMAD3P84022 425 aaKnown RBP13.53□□□□□ -0.24
TMEM56-202ENST00000455656 NIPA1Q7RTP0 329 aa13.53□□□□□ -0.24
TMEM56-202ENST00000455656 REXO1Q8N1G1 1221 aaKnown RBP13.53□□□□□ -0.24
TMEM56-202ENST00000455656 C7orf31Q8N865 590 aa13.53□□□□□ -0.24
TMEM56-202ENST00000455656 GIMAP8Q8ND71 665 aaPredicted RBP13.53□□□□□ -0.24
TMEM56-202ENST00000455656 PCYT2Q99447 389 aa13.53□□□□□ -0.24
TMEM56-202ENST00000455656 KIF2CQ99661 725 aa13.53□□□□□ -0.24
TMEM56-202ENST00000455656 RNPEPQ9H4A4 650 aa13.53□□□□□ -0.24
TMEM56-202ENST00000455656 AGO4Q9HCK5 861 aaKnown RBP13.53□□□□□ -0.24
TMEM56-202ENST00000455656 C6orf50Q9HD87 102 aa13.53□□□□□ -0.24
TMEM56-202ENST00000455656 SH3GLB2Q9NR46 395 aa13.53□□□□□ -0.24
TMEM56-202ENST00000455656 PKD2L1Q9P0L9 805 aa13.53□□□□□ -0.24
TMEM56-202ENST00000455656 NFASCO94856 1347 aa13.53□□□□□ -0.24
TMEM56-202ENST00000455656 DHX15O43143 795 aaKnown RBP13.52□□□□□ -0.25
TMEM56-202ENST00000455656 DEXIO95424 95 aa13.52□□□□□ -0.25
TMEM56-202ENST00000455656 SMIM10L2AP0DMW4 78 aa13.52□□□□□ -0.25
TMEM56-202ENST00000455656 SMIM10L2BP0DMW5 78 aa13.52□□□□□ -0.25
TMEM56-202ENST00000455656 GNA11P29992 359 aa13.52□□□□□ -0.25
TMEM56-202ENST00000455656 AKAP17AQ02040 695 aaKnown RBP13.52□□□□□ -0.25
TMEM56-202ENST00000455656 SP4Q02446 784 aa13.52□□□□□ -0.25
TMEM56-202ENST00000455656 SSRP1Q08945 709 aaKnown RBP13.52□□□□□ -0.25
TMEM56-202ENST00000455656 ST3GAL1Q11201 340 aa13.52□□□□□ -0.25
TMEM56-202ENST00000455656 PTK7Q13308 1070 aa13.52□□□□□ -0.25
TMEM56-202ENST00000455656 ME3Q16798 604 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms