RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 BCAS3Q9H6U6 928 aa18.55■□□□□ 0.56
SMPD4-214ENST00000455548 HAS3O00219 553 aa18.54■□□□□ 0.56
SMPD4-214ENST00000455548 CYP3A4P08684 503 aa18.54■□□□□ 0.56
SMPD4-214ENST00000455548 KCNA2P16389 499 aa18.54■□□□□ 0.56
SMPD4-214ENST00000455548 ZNF76P36508 570 aa18.54■□□□□ 0.56
SMPD4-214ENST00000455548 PPIGQ13427 754 aaKnown RBP eCLIP18.54■□□□□ 0.561e-8■■■■□ 21.1
SMPD4-214ENST00000455548 KIAA0753Q2KHM9 967 aa18.54■□□□□ 0.56
SMPD4-214ENST00000455548 TMEM199Q8N511 208 aa18.54■□□□□ 0.56
SMPD4-214ENST00000455548 GPR20Q99678 358 aa18.54■□□□□ 0.56
SMPD4-214ENST00000455548 ALG1Q9BT22 464 aa18.54■□□□□ 0.56
SMPD4-214ENST00000455548 NOC4LQ9BVI4 516 aaKnown RBP18.54■□□□□ 0.56
SMPD4-214ENST00000455548 C22orf23Q9BZE7 217 aa18.54■□□□□ 0.56
SMPD4-214ENST00000455548 PPP1R12CQ9BZL4 782 aa18.54■□□□□ 0.56
SMPD4-214ENST00000455548 UPF2Q9HAU5 1272 aaKnown RBP18.54■□□□□ 0.56
SMPD4-214ENST00000455548 KCNH7Q9NS40 1196 aa18.54■□□□□ 0.56
SMPD4-214ENST00000455548 TRMT13Q9NUP7 481 aaKnown RBP18.54■□□□□ 0.56
SMPD4-214ENST00000455548 NOD1Q9Y239 953 aa18.54■□□□□ 0.56
SMPD4-214ENST00000455548 MEIS1O00470 390 aa18.53■□□□□ 0.56
SMPD4-214ENST00000455548 ATP9AO75110 1047 aa18.53■□□□□ 0.56
SMPD4-214ENST00000455548 LGALS2P05162 132 aa18.53■□□□□ 0.56
SMPD4-214ENST00000455548 XBP1P17861 261 aa18.53■□□□□ 0.56
SMPD4-214ENST00000455548 FXR1P51114 621 aaKnown RBP eCLIP18.53■□□□□ 0.56
SMPD4-214ENST00000455548 GALNT17Q6IS24 598 aa18.53■□□□□ 0.56
SMPD4-214ENST00000455548 C7orf31Q8N865 590 aa18.53■□□□□ 0.56
SMPD4-214ENST00000455548 CRYGNQ8WXF5 182 aa18.53■□□□□ 0.56
SMPD4-214ENST00000455548 GTF3C6Q969F1 213 aa18.53■□□□□ 0.56
SMPD4-214ENST00000455548 C16orf70Q9BSU1 422 aa18.53■□□□□ 0.56
SMPD4-214ENST00000455548 H3BRB1 525 aa18.52■□□□□ 0.56
SMPD4-214ENST00000455548 ADAMTS3O15072 1205 aa18.52■□□□□ 0.56
SMPD4-214ENST00000455548 CYP2C18P33260 490 aa18.52■□□□□ 0.56
SMPD4-214ENST00000455548 RBM25P49756 843 aaKnown RBP18.52■□□□□ 0.56
SMPD4-214ENST00000455548 SP4Q02446 784 aa18.52■□□□□ 0.56
SMPD4-214ENST00000455548 ME3Q16798 604 aa18.52■□□□□ 0.56
SMPD4-214ENST00000455548 LRIT3Q3SXY7 679 aa18.52■□□□□ 0.56
SMPD4-214ENST00000455548 CYP2W1Q8TAV3 490 aa18.52■□□□□ 0.56
SMPD4-214ENST00000455548 PPP1R13LQ8WUF5 828 aa18.52■□□□□ 0.56
SMPD4-214ENST00000455548 WASF1Q92558 559 aa18.52■□□□□ 0.56
SMPD4-214ENST00000455548 TUT1Q9H6E5 874 aaKnown RBP18.52■□□□□ 0.56
SMPD4-214ENST00000455548 HDAC6Q9UBN7 1215 aa18.52■□□□□ 0.56
SMPD4-214ENST00000455548 GTF2IRD1Q9UHL9 959 aa18.52■□□□□ 0.56
SMPD4-214ENST00000455548 ZNF215Q9UL58 517 aaPredicted RBP18.52■□□□□ 0.56
SMPD4-214ENST00000455548 PCDHA4Q9UN74 947 aa18.52■□□□□ 0.56
SMPD4-214ENST00000455548 NFASCO94856 1347 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 LARGE1O95461 756 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 CYP2C9P11712 490 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 PTGISQ16647 500 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 GDF6Q6KF10 455 aaPredicted RBP18.51■□□□□ 0.55
SMPD4-214ENST00000455548 BLIDQ8IZY5 108 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 CCDC155Q8N6L0 562 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 NECAB1Q8N987 351 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 DAGLBQ8NCG7 672 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 RASGRP4Q8TDF6 673 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 SEPT1Q8WYJ6 367 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 SDF4Q9BRK5 362 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 PKD2L1Q9P0L9 805 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 ORC3Q9UBD5 711 aaPredicted RBP18.51■□□□□ 0.55
SMPD4-214ENST00000455548 LIMCH1Q9UPQ0 1083 aa18.51■□□□□ 0.55
SMPD4-214ENST00000455548 KAT6AQ92794 2004 aa18.5■□□□□ 0.55
SMPD4-214ENST00000455548 TRIP12Q14669 1992 aaPredicted RBP18.5■□□□□ 0.55
SMPD4-214ENST00000455548 LAMA3Q16787 3333 aa18.5■□□□□ 0.55
SMPD4-214ENST00000455548 PITPNM1O00562 1244 aa18.5■□□□□ 0.55
SMPD4-214ENST00000455548 CTDNEP1O95476 244 aa18.5■□□□□ 0.55
SMPD4-214ENST00000455548 ARP10275 920 aa18.5■□□□□ 0.55
SMPD4-214ENST00000455548 SETQ01105 290 aaPredicted RBP18.5■□□□□ 0.55
SMPD4-214ENST00000455548 BFSP2Q13515 415 aa18.5■□□□□ 0.55
SMPD4-214ENST00000455548 SHHQ15465 462 aa18.5■□□□□ 0.55
SMPD4-214ENST00000455548 PLA2G4DQ86XP0 818 aa18.5■□□□□ 0.55
SMPD4-214ENST00000455548 AIFM3Q96NN9 605 aa18.5■□□□□ 0.55
SMPD4-214ENST00000455548 AGO4Q9HCK5 861 aaKnown RBP18.5■□□□□ 0.55
SMPD4-214ENST00000455548 JPH1Q9HDC5 661 aaPredicted RBP18.5■□□□□ 0.55
SMPD4-214ENST00000455548 SLC9A2Q9UBY0 812 aa18.5■□□□□ 0.55
SMPD4-214ENST00000455548 FAM86B1E9PN63 330 aa18.49■□□□□ 0.55
SMPD4-214ENST00000455548 FAM86B2P0C5J1 330 aa18.49■□□□□ 0.55
SMPD4-214ENST00000455548 CSF2RAP15509 400 aa18.49■□□□□ 0.55
SMPD4-214ENST00000455548 TCF7P36402 384 aaPredicted RBP18.49■□□□□ 0.55
SMPD4-214ENST00000455548 EPHB4P54760 987 aa18.49■□□□□ 0.55
SMPD4-214ENST00000455548 C9orf50Q5SZB4 431 aa18.49■□□□□ 0.55
SMPD4-214ENST00000455548 UTP14CQ5TAP6 766 aaKnown RBP18.49■□□□□ 0.55
SMPD4-214ENST00000455548 RETREG2Q8NC44 543 aa18.49■□□□□ 0.55
SMPD4-214ENST00000455548 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
SMPD4-214ENST00000455548 KIF2CQ99661 725 aa18.49■□□□□ 0.55
SMPD4-214ENST00000455548 IL23AQ9NPF7 189 aa18.49■□□□□ 0.55
SMPD4-214ENST00000455548 UMODL1Q5DID0 1318 aa18.49■□□□□ 0.55
SMPD4-214ENST00000455548 IGLV3-22A0A075B6J6 115 aa18.48■□□□□ 0.55
SMPD4-214ENST00000455548 GSTTP1A0A1W2PQM5 241 aa18.48■□□□□ 0.55
SMPD4-214ENST00000455548 CIITAP33076 1130 aa18.48■□□□□ 0.55
SMPD4-214ENST00000455548 USP11P51784 963 aa18.48■□□□□ 0.55
SMPD4-214ENST00000455548 CCL23P55773 120 aa18.48■□□□□ 0.55
SMPD4-214ENST00000455548 NSUN7Q8NE18 718 aaKnown RBP18.48■□□□□ 0.55
SMPD4-214ENST00000455548 CAGE1Q8TC20 777 aa18.48■□□□□ 0.55
SMPD4-214ENST00000455548 ZSCAN31Q96LW9 406 aaPredicted RBP18.48■□□□□ 0.55
SMPD4-214ENST00000455548 PHF20Q9BVI0 1012 aa18.48■□□□□ 0.55
SMPD4-214ENST00000455548 WNT8AQ9H1J5 351 aa18.48■□□□□ 0.55
SMPD4-214ENST00000455548 TELO2Q9Y4R8 837 aa18.48■□□□□ 0.55
SMPD4-214ENST00000455548 LAMA2P24043 3122 aaKnown RBP18.48■□□□□ 0.55
SMPD4-214ENST00000455548 TANC1Q9C0D5 1861 aa18.48■□□□□ 0.55
SMPD4-214ENST00000455548 C17orf102A2RUQ5 167 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 M0R2N6 131 aa18.47■□□□□ 0.55
SMPD4-214ENST00000455548 IPO5O00410 1097 aaKnown RBP18.47■□□□□ 0.55
SMPD4-214ENST00000455548 SMIM10L2AP0DMW4 78 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms