RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 CCSAPQ6IQ19 270 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 RCSD1Q6JBY9 416 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 MAMDC4Q6UXC1 1216 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 ARMCX2Q7L311 632 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 EEPD1Q7L9B9 569 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 GLYCTKQ8IVS8 523 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 CCDC144CPQ8IYA2 1237 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 KLHDC9Q8NEP7 349 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 STAG1Q8WVM7 1258 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 FOXD4L4Q8WXT5 416 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 GUCD1Q96NT3 240 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 TRERF1Q96PN7 1200 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 TSEN34Q9BSV6 310 aaKnown RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 C2orf49Q9BVC5 232 aaPredicted RBP5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 ZNF287Q9HBT7 754 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 PDGFCQ9NRA1 345 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 TOMM22Q9NS69 142 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 TMEM39AQ9NV64 488 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 FAM184BQ9ULE4 1060 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 STX8Q9UNK0 236 aa5.55□□□□□ -1.52
GTF3C3-208ENST00000455546 LCTP09848 1927 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 SALL3Q9BXA9 1300 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 SYNRGQ9UMZ2 1314 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 A0A0D9SFI3 127 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 SERTM1A2A2V5 107 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 FIGNL2A6NMB9 653 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 EML1O00423 815 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 CDK2AP1O14519 115 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 GFRA3O60609 400 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 DUSP11O75319 330 aaKnown RBP5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 UPP2O95045 317 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 IGHDP01880 384 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 ASGR1P07306 291 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 CLTBP09497 229 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 C6orf222P0C671 652 aaPredicted RBP5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 RAG1P15918 1043 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 COPB2P35606 906 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 STAT2P52630 851 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 ACLYP53396 1101 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 HAND2P61296 217 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 BEX3Q00994 111 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 NMIQ13287 307 aaPredicted RBP5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 GNASQ5JWF2 1037 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 C1orf53Q5VUE5 145 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 MRPL14Q6P1L8 145 aaKnown RBP5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 NOL8Q76FK4 1167 aaKnown RBP5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 ZNF589Q86UQ0 364 aaPredicted RBP5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 GMCL1P1Q8NEA9 526 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 CHST13Q8NET6 341 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 CHURC1Q8WUH1 139 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 RILPL2Q969X0 211 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 EVI5LQ96CN4 794 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 LNPKQ9C0E8 428 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 SEMA6BQ9H3T3 888 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 ABHD16BQ9H3Z7 469 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 A1CFQ9NQ94 594 aaKnown RBP5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 STARD7Q9NQZ5 370 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 RNF146Q9NTX7 359 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 NRBP1Q9UHY1 535 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 PRR12Q9ULL5 1215 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 STXBP5LQ9Y2K9 1186 aa5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.54□□□□□ -1.52
GTF3C3-208ENST00000455546 COL6A3P12111 3177 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 ASTN1O14525 1302 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 FRMPD2Q68DX3 1309 aaPredicted RBP5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 SYNGAP1Q96PV0 1343 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 DNAH12Q6ZR08 3092 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 DCDC2CA8MYV0 355 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 RBAK-RBAKDNI3L0D1 243 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 KIAA0355O15063 1070 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 CTAGE5O15320 804 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 DYNC1LI2O43237 492 aaPredicted RBP5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 SPINT1O43278 529 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 ICMTO60725 284 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 ACRP10323 421 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 HSPD1P10809 573 aaKnown RBP5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 RHOQP17081 205 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 TXLNAP40222 546 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 CDK7P50613 346 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 TNFAIP2Q03169 654 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 CCDC96Q2M329 555 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 MCMDC2Q4G0Z9 681 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 PKDCCQ504Y2 493 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 C4orf17Q53FE4 359 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 CXCL17Q6UXB2 119 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 NSMFQ6X4W1 530 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 C16orf59Q7L2K0 433 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 PRICKLE2Q7Z3G6 844 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 TRIM46Q7Z4K8 759 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 FAM160B2Q86V87 743 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 MSL3Q8N5Y2 521 aaKnown RBP5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 FAM133AQ8N9E0 248 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 PPP1R13LQ8WUF5 828 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 NUP133Q8WUM0 1156 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 GMCL1Q96IK5 515 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 CDX2Q99626 313 aaPredicted RBP5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 TMEM47Q9BQJ4 181 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 ZKSCAN3Q9BRR0 538 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 KATNBL1Q9H079 304 aa5.53□□□□□ -1.52
GTF3C3-208ENST00000455546 TTYH1Q9H313 450 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms