RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 BMP15O95972 392 aa12.14□□□□□ -0.47
SYPL1-202ENST00000455385 SPIRE1Q08AE8 756 aa12.14□□□□□ -0.47
SYPL1-202ENST00000455385 TTLL4Q14679 1199 aa12.14□□□□□ -0.47
SYPL1-202ENST00000455385 KCNV1Q6PIU1 500 aa12.14□□□□□ -0.47
SYPL1-202ENST00000455385 CYFIP1Q7L576 1253 aa12.14□□□□□ -0.47
SYPL1-202ENST00000455385 LENG1Q96BZ8 264 aaPredicted RBP12.14□□□□□ -0.47
SYPL1-202ENST00000455385 TTC12Q9H892 705 aaPredicted RBP12.14□□□□□ -0.47
SYPL1-202ENST00000455385 NRBP1Q9UHY1 535 aa12.14□□□□□ -0.47
SYPL1-202ENST00000455385 VAV3Q9UKW4 847 aa12.14□□□□□ -0.47
SYPL1-202ENST00000455385 PCDHA12Q9UN75 941 aa12.14□□□□□ -0.47
SYPL1-202ENST00000455385 LAD1O00515 517 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 MARCH6O60337 910 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 PRPHP41219 470 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 TECP42680 631 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 TNFAIP2Q03169 654 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 DUSP28Q4G0W2 176 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 LRCH2Q5VUJ6 765 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 ARL6IP4Q66PJ3 421 aaKnown RBP12.13□□□□□ -0.47
SYPL1-202ENST00000455385 B3GNT9Q6UX72 402 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 SPATA32Q96LK8 384 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 CLIC6Q96NY7 704 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 RIT2Q99578 217 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 SCAND2PQ9GZW5 306 aaPredicted RBP12.13□□□□□ -0.47
SYPL1-202ENST00000455385 PRDM10Q9NQV6 1147 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 PCDHA7Q9UN72 937 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 GNEQ9Y223 722 aaKnown RBP12.13□□□□□ -0.47
SYPL1-202ENST00000455385 MORC2Q9Y6X9 1032 aaPredicted RBP12.13□□□□□ -0.47
SYPL1-202ENST00000455385 VWA3AA6NCI4 1184 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 GAS7O60861 476 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 PPP6R2O75170 966 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 GGPS1O95749 300 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 CCNE2O96020 404 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 CNGA1P29973 690 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 IRX5P78411 483 aaPredicted RBP12.13□□□□□ -0.47
SYPL1-202ENST00000455385 CELF3Q5SZQ8 465 aaKnown RBP12.13□□□□□ -0.47
SYPL1-202ENST00000455385 AXDND1Q5T1B0 1012 aaPredicted RBP12.13□□□□□ -0.47
SYPL1-202ENST00000455385 FBXO46Q6PJ61 603 aaPredicted RBP12.13□□□□□ -0.47
SYPL1-202ENST00000455385 DTHD1Q6ZMT9 781 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 SLFN12Q8IYM2 578 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 UNC45AQ9H3U1 944 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 TBC1D22BQ9NU19 505 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 FAM184BQ9ULE4 1060 aa12.13□□□□□ -0.47
SYPL1-202ENST00000455385 SRPRBQ9Y5M8 271 aaKnown RBP12.13□□□□□ -0.47
SYPL1-202ENST00000455385 EML1O00423 815 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 SEPT4O43236 478 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 FARP2O94887 1054 aaPredicted RBP12.12□□□□□ -0.47
SYPL1-202ENST00000455385 CDC25AP30304 524 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 ARHGAP1Q07960 439 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 NEDD9Q14511 834 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 SPECC1Q5M775 1068 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 NFASCO94856 1347 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 BRCA2P51587 3418 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 POTEMA6NI47 508 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 AKR1A1P14550 325 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 ME1P48163 572 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.472e-6■□□□□ 9.5
SYPL1-202ENST00000455385 SP4Q02446 784 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 PPP2R5CQ13362 524 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 MTFR1Q15390 333 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 HSDL1Q3SXM5 330 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 SLC9C1Q4G0N8 1177 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 DHX37Q8IY37 1157 aaKnown RBP12.12□□□□□ -0.47
SYPL1-202ENST00000455385 IGSF22Q8N9C0 903 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 KCNG4Q8TDN1 519 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 SDF4Q9BRK5 362 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 TEKT3Q9BXF9 490 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 CSRNP2Q9H175 543 aa12.12□□□□□ -0.47
SYPL1-202ENST00000455385 PP2D1A8MPX8 630 aa12.11□□□□□ -0.47
SYPL1-202ENST00000455385 DYNC1LI2O43237 492 aaPredicted RBP12.11□□□□□ -0.47
SYPL1-202ENST00000455385 MYCP01106 439 aaPredicted RBP12.11□□□□□ -0.47
SYPL1-202ENST00000455385 PKN2Q16513 984 aaKnown RBP12.11□□□□□ -0.47
SYPL1-202ENST00000455385 METTL7BQ6UX53 244 aa12.11□□□□□ -0.47
SYPL1-202ENST00000455385 USP49Q70CQ1 688 aa12.11□□□□□ -0.47
SYPL1-202ENST00000455385 KRI1Q8N9T8 703 aaKnown RBP12.11□□□□□ -0.47
SYPL1-202ENST00000455385 FERMT2Q96AC1 680 aa12.11□□□□□ -0.47
SYPL1-202ENST00000455385 MLXIPQ9HAP2 919 aa12.11□□□□□ -0.47
SYPL1-202ENST00000455385 JPH1Q9HDC5 661 aaPredicted RBP12.11□□□□□ -0.47
SYPL1-202ENST00000455385 SLC9A2Q9UBY0 812 aa12.11□□□□□ -0.47
SYPL1-202ENST00000455385 GSTTP1A0A1W2PQM5 241 aa12.11□□□□□ -0.47
SYPL1-202ENST00000455385 CHMP2AO43633 222 aa12.11□□□□□ -0.47
SYPL1-202ENST00000455385 GH1P01241 217 aa12.11□□□□□ -0.47
SYPL1-202ENST00000455385 PDIA5Q14554 519 aa12.11□□□□□ -0.47
SYPL1-202ENST00000455385 GIMAP8Q8ND71 665 aaPredicted RBP12.11□□□□□ -0.47
SYPL1-202ENST00000455385 SPATA33Q96N06 139 aa12.11□□□□□ -0.47
SYPL1-202ENST00000455385 UNC93B1Q9H1C4 597 aa12.11□□□□□ -0.47
SYPL1-202ENST00000455385 HMX1Q9NP08 348 aaPredicted RBP12.11□□□□□ -0.47
SYPL1-202ENST00000455385 NKRFO15226 690 aaKnown RBP eCLIP12.1□□□□□ -0.47
SYPL1-202ENST00000455385 CTAGE5O15320 804 aa12.1□□□□□ -0.47
SYPL1-202ENST00000455385 GADD45BO75293 160 aaPredicted RBP12.1□□□□□ -0.47
SYPL1-202ENST00000455385 DUSP11O75319 330 aaKnown RBP12.1□□□□□ -0.47
SYPL1-202ENST00000455385 ATG7O95352 703 aa12.1□□□□□ -0.47
SYPL1-202ENST00000455385 ACTR2P61160 394 aa12.1□□□□□ -0.47
SYPL1-202ENST00000455385 LAMC2Q13753 1193 aa12.1□□□□□ -0.47
SYPL1-202ENST00000455385 TPRNQ4KMQ1 711 aa12.1□□□□□ -0.47
SYPL1-202ENST00000455385 LHX8Q68G74 356 aa12.1□□□□□ -0.47
SYPL1-202ENST00000455385 ZNF746Q6NUN9 644 aaPredicted RBP12.1□□□□□ -0.47
SYPL1-202ENST00000455385 SHC4Q6S5L8 630 aa12.1□□□□□ -0.47
SYPL1-202ENST00000455385 AFG1LQ8WV93 481 aa12.1□□□□□ -0.47
SYPL1-202ENST00000455385 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
SYPL1-202ENST00000455385 EPSTI1Q96J88 318 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms