RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 UIMC1Q96RL1 719 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 PDGFCQ9NRA1 345 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 DDX41Q9UJV9 622 aaKnown RBP18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 ADCY3O60266 1144 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 GAS7O60861 476 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 PRPF40AO75400 957 aaKnown RBP18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 UBA1P22314 1058 aaKnown RBP18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 TECP42680 631 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 PPP2R5CQ13362 524 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 TTLL4Q14679 1199 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 AK8Q96MA6 479 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 TEKT3Q9BXF9 490 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 CSRNP2Q9H175 543 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 LMBRD1Q9NUN5 540 aa18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 ZHX1Q9UKY1 873 aaPredicted RBP18.72■□□□□ 0.59
CCDC90B-202ENST00000455220 A0A1W2PQ27 194 aa18.71■□□□□ 0.59
CCDC90B-202ENST00000455220 A0A1W2PQ64 194 aa18.71■□□□□ 0.59
CCDC90B-202ENST00000455220 A0A1W2PQD8 194 aa18.71■□□□□ 0.59
CCDC90B-202ENST00000455220 NEDD9Q14511 834 aa18.71■□□□□ 0.59
CCDC90B-202ENST00000455220 GIMAP8Q8ND71 665 aaPredicted RBP18.71■□□□□ 0.59
CCDC90B-202ENST00000455220 RAB34Q9BZG1 259 aa18.71■□□□□ 0.59
CCDC90B-202ENST00000455220 PKD2L1Q9P0L9 805 aa18.71■□□□□ 0.59
CCDC90B-202ENST00000455220 HMGCRP04035 888 aa18.7■□□□□ 0.58
CCDC90B-202ENST00000455220 CYBAP13498 195 aa18.7■□□□□ 0.58
CCDC90B-202ENST00000455220 ELNP15502 786 aa18.7■□□□□ 0.58
CCDC90B-202ENST00000455220 CTCFP49711 727 aaPredicted RBP18.7■□□□□ 0.58
CCDC90B-202ENST00000455220 LY6KQ17RY6 165 aa18.7■□□□□ 0.58
CCDC90B-202ENST00000455220 PRAMEF19Q5SWL8 479 aa18.7■□□□□ 0.58
CCDC90B-202ENST00000455220 IQSEC1Q6DN90 963 aa18.7■□□□□ 0.58
CCDC90B-202ENST00000455220 SHC4Q6S5L8 630 aa18.7■□□□□ 0.58
CCDC90B-202ENST00000455220 SLAIN1Q8ND83 568 aa18.7■□□□□ 0.58
CCDC90B-202ENST00000455220 SDF4Q9BRK5 362 aa18.7■□□□□ 0.58
CCDC90B-202ENST00000455220 DOCK5Q9H7D0 1870 aa18.7■□□□□ 0.58
CCDC90B-202ENST00000455220 POTEMA6NI47 508 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 DDX11L8A8MPP1 907 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 GADD45BO75293 160 aaPredicted RBP18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 TXNP10599 105 aaKnown RBP18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 ADCYAP1R1P41586 468 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 UBE2HP62256 183 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 KRT76Q01546 638 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 CCDC144BQ3MJ40 725 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 MAP3K21Q5TCX8 1036 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 TRPV1Q8NER1 839 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 UNC45AQ9H3U1 944 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 BCAS3Q9H6U6 928 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 JPH1Q9HDC5 661 aaPredicted RBP18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 LRWD1Q9UFC0 647 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 PTPN22Q9Y2R2 807 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 PTCH2Q9Y6C5 1203 aa18.69■□□□□ 0.58
CCDC90B-202ENST00000455220 NKRFO15226 690 aaKnown RBP eCLIP18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 FARP2O94887 1054 aaPredicted RBP18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 CMA1P23946 247 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 DUSP28Q4G0W2 176 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 RESP18Q5W5W9 173 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 ZNF746Q6NUN9 644 aaPredicted RBP18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 METTL7BQ6UX53 244 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 CENPFP49454 3210 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 FAM237AA0A1B0GTK4 181 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 GOLGA6L4A6NEF3 574 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 GGPS1O95749 300 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 CCNE2O96020 404 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 SMPD1P17405 629 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 LBX1P52954 281 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 CACNB2Q08289 660 aaPredicted RBP18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 TRIM32Q13049 653 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 CELF3Q5SZQ8 465 aaKnown RBP18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 TMEM63BQ5T3F8 832 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 CYFIP1Q7L576 1253 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 EMID1Q96A84 441 aaPredicted RBP18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 SLC9A2Q9UBY0 812 aa18.68■□□□□ 0.58
CCDC90B-202ENST00000455220 PP2D1A8MPX8 630 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 DDX39AO00148 427 aaKnown RBP18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 EML1O00423 815 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 ADCY6O43306 1168 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 GRK4P32298 578 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 SPECC1Q5M775 1068 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 NCAPH2Q6IBW4 605 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 USP49Q70CQ1 688 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 SMAP1Q8IYB5 467 aaPredicted RBP18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 RDM1Q8NG50 284 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 MRPS27Q92552 414 aaKnown RBP18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 SYMPKQ92797 1274 aaKnown RBP18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 COPS5Q92905 334 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 EPSTI1Q96J88 318 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 MMTAG2Q9BU76 263 aaKnown RBP18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 CCSER1Q9C0I3 900 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 TCEAL9Q9UHQ7 104 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 FAM184BQ9ULE4 1060 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 GNEQ9Y223 722 aaKnown RBP18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 STK24Q9Y6E0 443 aa18.67■□□□□ 0.58
CCDC90B-202ENST00000455220 PRKAR2AP13861 404 aaKnown RBP18.66■□□□□ 0.58
CCDC90B-202ENST00000455220 AKR1A1P14550 325 aa18.66■□□□□ 0.58
CCDC90B-202ENST00000455220 SFNP31947 248 aa18.66■□□□□ 0.58
CCDC90B-202ENST00000455220 JAK3P52333 1124 aa18.66■□□□□ 0.58
CCDC90B-202ENST00000455220 TNFAIP2Q03169 654 aa18.66■□□□□ 0.58
CCDC90B-202ENST00000455220 ARHGAP1Q07960 439 aa18.66■□□□□ 0.58
CCDC90B-202ENST00000455220 HPSEQ9Y251 543 aa18.66■□□□□ 0.58
CCDC90B-202ENST00000455220 WDR64B1ANS9 1081 aa18.65■□□□□ 0.58
CCDC90B-202ENST00000455220 SLC26A4O43511 780 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms