RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 GLT8D2Q9H1C3 349 aa28.42■■■□□ 2.14
MSH2-203ENST00000454849 NOD1Q9Y239 953 aa28.42■■■□□ 2.14
MSH2-203ENST00000454849 F2P00734 622 aa28.41■■■□□ 2.14
MSH2-203ENST00000454849 ARP10275 920 aa28.41■■■□□ 2.14
MSH2-203ENST00000454849 HOXD8P13378 290 aaPredicted RBP28.41■■■□□ 2.14
MSH2-203ENST00000454849 KCNA2P16389 499 aa28.41■■■□□ 2.14
MSH2-203ENST00000454849 ZNF200P98182 395 aaPredicted RBP28.41■■■□□ 2.14
MSH2-203ENST00000454849 PTGISQ16647 500 aa28.41■■■□□ 2.14
MSH2-203ENST00000454849 C16orf59Q7L2K0 433 aa28.41■■■□□ 2.14
MSH2-203ENST00000454849 TRIM50Q86XT4 487 aa28.41■■■□□ 2.14
MSH2-203ENST00000454849 C7orf31Q8N865 590 aa28.41■■■□□ 2.14
MSH2-203ENST00000454849 CCDC12Q8WUD4 166 aaPredicted RBP28.41■■■□□ 2.14
MSH2-203ENST00000454849 SCLYQ96I15 445 aa28.41■■■□□ 2.14
MSH2-203ENST00000454849 C16orf70Q9BSU1 422 aa28.41■■■□□ 2.14
MSH2-203ENST00000454849 WNT8AQ9H1J5 351 aa28.41■■■□□ 2.14
MSH2-203ENST00000454849 LAMA3Q16787 3333 aa28.41■■■□□ 2.14
MSH2-203ENST00000454849 ESYT2A0FGR8 921 aa28.4■■■□□ 2.14
MSH2-203ENST00000454849 PFKFB2O60825 505 aa28.4■■■□□ 2.14
MSH2-203ENST00000454849 LARGE1O95461 756 aa28.4■■■□□ 2.14
MSH2-203ENST00000454849 LGALS2P05162 132 aa28.4■■■□□ 2.14
MSH2-203ENST00000454849 SUPT20HL2P0C7V6 817 aa28.4■■■□□ 2.14
MSH2-203ENST00000454849 ZNF76P36508 570 aa28.4■■■□□ 2.14
MSH2-203ENST00000454849 NLRP5P59047 1200 aa28.4■■■□□ 2.14
MSH2-203ENST00000454849 ARHGAP4P98171 946 aa28.4■■■□□ 2.14
MSH2-203ENST00000454849 AP3B2Q13367 1082 aa28.4■■■□□ 2.14
MSH2-203ENST00000454849 REXO1Q8N1G1 1221 aaKnown RBP28.4■■■□□ 2.14
MSH2-203ENST00000454849 TMEM199Q8N511 208 aa28.4■■■□□ 2.14
MSH2-203ENST00000454849 HAS3O00219 553 aa28.39■■■□□ 2.14
MSH2-203ENST00000454849 EIF5BO60841 1220 aaKnown RBP28.39■■■□□ 2.14
MSH2-203ENST00000454849 SREBF1P36956 1147 aa28.39■■■□□ 2.14
MSH2-203ENST00000454849 HIC1Q14526 733 aa28.39■■■□□ 2.14
MSH2-203ENST00000454849 CPLX2Q6PUV4 134 aaKnown RBP28.39■■■□□ 2.14
MSH2-203ENST00000454849 IL17RAQ96F46 866 aa28.39■■■□□ 2.14
MSH2-203ENST00000454849 SENP7Q9BQF6 1050 aa28.39■■■□□ 2.14
MSH2-203ENST00000454849 KCNH7Q9NS40 1196 aa28.39■■■□□ 2.14
MSH2-203ENST00000454849 GNA11P29992 359 aa28.38■■■□□ 2.13
MSH2-203ENST00000454849 PTPN11Q06124 597 aaPredicted RBP28.38■■■□□ 2.13
MSH2-203ENST00000454849 ANKRD1Q15327 319 aa28.38■■■□□ 2.13
MSH2-203ENST00000454849 LRIT3Q3SXY7 679 aa28.38■■■□□ 2.13
MSH2-203ENST00000454849 CEP55Q53EZ4 464 aa28.38■■■□□ 2.13
MSH2-203ENST00000454849 CDHR1Q96JP9 859 aa28.38■■■□□ 2.13
MSH2-203ENST00000454849 CTAGE1Q96RT6 745 aa28.38■■■□□ 2.13
MSH2-203ENST00000454849 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.38■■■□□ 2.13
MSH2-203ENST00000454849 KATNAL1Q9BW62 490 aa28.38■■■□□ 2.13
MSH2-203ENST00000454849 H3BRB1 525 aa28.37■■■□□ 2.13
MSH2-203ENST00000454849 DEXIO95424 95 aa28.37■■■□□ 2.13
MSH2-203ENST00000454849 PPIGQ13427 754 aaKnown RBP eCLIP28.37■■■□□ 2.131e-6■■□□□ 12.5
MSH2-203ENST00000454849 ME3Q16798 604 aa28.37■■■□□ 2.13
MSH2-203ENST00000454849 CCDC148Q8NFR7 591 aa28.37■■■□□ 2.13
MSH2-203ENST00000454849 RNPC3Q96LT9 517 aaKnown RBP28.37■■■□□ 2.13
MSH2-203ENST00000454849 TUT1Q9H6E5 874 aaKnown RBP28.37■■■□□ 2.13
MSH2-203ENST00000454849 GTF2IRD1Q9UHL9 959 aa28.37■■■□□ 2.13
MSH2-203ENST00000454849 FAM86B1E9PN63 330 aa28.36■■■□□ 2.13
MSH2-203ENST00000454849 SLC34A2O95436 690 aa28.36■■■□□ 2.13
MSH2-203ENST00000454849 CTDNEP1O95476 244 aa28.36■■■□□ 2.13
MSH2-203ENST00000454849 FAM86B2P0C5J1 330 aa28.36■■■□□ 2.13
MSH2-203ENST00000454849 ZNF365Q70YC5 407 aa28.36■■■□□ 2.13
MSH2-203ENST00000454849 GJB4Q9NTQ9 266 aa28.36■■■□□ 2.13
MSH2-203ENST00000454849 KCNJ14Q9UNX9 436 aa28.36■■■□□ 2.13
MSH2-203ENST00000454849 GSTTP1A0A1W2PQM5 241 aa28.35■■■□□ 2.13
MSH2-203ENST00000454849 TMEM240Q5SV17 173 aa28.35■■■□□ 2.13
MSH2-203ENST00000454849 SESTD1Q86VW0 696 aa28.35■■■□□ 2.13
MSH2-203ENST00000454849 GIMAP8Q8ND71 665 aaPredicted RBP28.35■■■□□ 2.13
MSH2-203ENST00000454849 AGO4Q9HCK5 861 aaKnown RBP28.35■■■□□ 2.13
MSH2-203ENST00000454849 SH3GLB2Q9NR46 395 aa28.35■■■□□ 2.13
MSH2-203ENST00000454849 SZT2Q5T011 3432 aa28.35■■■□□ 2.13
MSH2-203ENST00000454849 DDX39AO00148 427 aaKnown RBP28.34■■■□□ 2.13
MSH2-203ENST00000454849 MEIS1O00470 390 aa28.34■■■□□ 2.13
MSH2-203ENST00000454849 TCF7P36402 384 aaPredicted RBP28.34■■■□□ 2.13
MSH2-203ENST00000454849 ITGB3BPQ13352 177 aaPredicted RBP28.34■■■□□ 2.13
MSH2-203ENST00000454849 DEFB128Q7Z7B8 93 aa28.34■■■□□ 2.13
MSH2-203ENST00000454849 PLA2G4DQ86XP0 818 aa28.34■■■□□ 2.13
MSH2-203ENST00000454849 TEX2Q8IWB9 1127 aa28.34■■■□□ 2.13
MSH2-203ENST00000454849 BICD2Q8TD16 824 aa28.34■■■□□ 2.13
MSH2-203ENST00000454849 DHX38Q92620 1227 aaKnown RBP28.34■■■□□ 2.13
MSH2-203ENST00000454849 IL23AQ9NPF7 189 aa28.34■■■□□ 2.13
MSH2-203ENST00000454849 CDKL5O76039 1030 aa28.33■■■□□ 2.13
MSH2-203ENST00000454849 SMIM10L2AP0DMW4 78 aa28.33■■■□□ 2.13
MSH2-203ENST00000454849 SMIM10L2BP0DMW5 78 aa28.33■■■□□ 2.13
MSH2-203ENST00000454849 Q7L0L9 218 aa28.33■■■□□ 2.13
MSH2-203ENST00000454849 RETREG2Q8NC44 543 aa28.33■■■□□ 2.13
MSH2-203ENST00000454849 CRYGNQ8WXF5 182 aa28.33■■■□□ 2.13
MSH2-203ENST00000454849 WNT8BQ93098 351 aa28.33■■■□□ 2.13
MSH2-203ENST00000454849 MAFGO15525 162 aa28.32■■■□□ 2.12
MSH2-203ENST00000454849 MARK3P27448 753 aa28.32■■■□□ 2.12
MSH2-203ENST00000454849 SEPT1Q8WYJ6 367 aa28.32■■■□□ 2.12
MSH2-203ENST00000454849 VWCEQ96DN2 955 aa28.32■■■□□ 2.12
MSH2-203ENST00000454849 C22orf23Q9BZE7 217 aa28.32■■■□□ 2.12
MSH2-203ENST00000454849 RNPEPQ9H4A4 650 aa28.32■■■□□ 2.12
MSH2-203ENST00000454849 JPH1Q9HDC5 661 aaPredicted RBP28.32■■■□□ 2.12
MSH2-203ENST00000454849 SETD4Q9NVD3 440 aa28.32■■■□□ 2.12
MSH2-203ENST00000454849 CYP3A4P08684 503 aa28.31■■■□□ 2.12
MSH2-203ENST00000454849 FOSBP53539 338 aa28.31■■■□□ 2.12
MSH2-203ENST00000454849 OTOP2Q7RTS6 562 aa28.31■■■□□ 2.12
MSH2-203ENST00000454849 KIF2CQ99661 725 aa28.31■■■□□ 2.12
MSH2-203ENST00000454849 SDF4Q9BRK5 362 aa28.31■■■□□ 2.12
MSH2-203ENST00000454849 ORC3Q9UBD5 711 aaPredicted RBP28.31■■■□□ 2.12
MSH2-203ENST00000454849 SLC9A2Q9UBY0 812 aa28.31■■■□□ 2.12
MSH2-203ENST00000454849 PCDHA4Q9UN74 947 aa28.31■■■□□ 2.12
MSH2-203ENST00000454849 LAMA2P24043 3122 aaKnown RBP28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms