RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 GUF1Q8N442 669 aaKnown RBP15.16■□□□□ 0.02
CLK3-203ENST00000454830 ACRBPQ8NEB7 543 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 RPAP3Q9H6T3 665 aaPredicted RBP15.16■□□□□ 0.02
CLK3-203ENST00000454830 RABGAP1Q9Y3P9 1069 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 ZHX2Q9Y6X8 837 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 RGPD3A6NKT7 1758 aaPredicted RBP15.16■□□□□ 0.02
CLK3-203ENST00000454830 EML1O00423 815 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 CYP11B2P19099 503 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 MOXD1Q6UVY6 613 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 RGPD4Q7Z3J3 1758 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 DYDC2Q96IM9 177 aa15.16■□□□□ 0.02
CLK3-203ENST00000454830 ZNF541Q9H0D2 1346 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 RNF225M0QZC1 329 aaPredicted RBP15.15■□□□□ 0.02
CLK3-203ENST00000454830 IPO7O95373 1038 aaKnown RBP15.15■□□□□ 0.02
CLK3-203ENST00000454830 CASQ1P31415 396 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 Q4G0T1 1027 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 CEP55Q53EZ4 464 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 CCDC125Q86Z20 511 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 MNS1Q8NEH6 495 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 ABHD10Q9NUJ1 306 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 GGA3Q9NZ52 723 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 LRRC10BA6NIK2 292 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 TRIM14Q14142 442 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 WDR18Q9BV38 432 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 ZNF215Q9UL58 517 aaPredicted RBP15.15■□□□□ 0.02
CLK3-203ENST00000454830 CD2APQ9Y5K6 639 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 TBX3O15119 743 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 WDR46O15213 610 aaKnown RBP15.15■□□□□ 0.02
CLK3-203ENST00000454830 ZBED4O75132 1171 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 ARP10275 920 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 LENG9Q96B70 501 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 DNAJC19Q96DA6 116 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 FGFBP2Q9BYJ0 223 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 IRX2Q9BZI1 471 aaPredicted RBP15.15■□□□□ 0.02
CLK3-203ENST00000454830 EMILIN3Q9NT22 766 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 SYNPO2Q9UMS6 1093 aa15.15■□□□□ 0.02
CLK3-203ENST00000454830 CTNND1O60716 968 aaKnown RBP15.14■□□□□ 0.01
CLK3-203ENST00000454830 FAM13AO94988 1023 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 RPA1P27694 616 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 PBX1P40424 430 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 HMGCS2P54868 508 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 PSMD2Q13200 908 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 CYP26C1Q6V0L0 522 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 SFR1Q86XK3 245 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 REXO1L1PQ8IX06 675 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 OR8K1Q8NGG5 319 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 MRPL44Q9H9J2 332 aaKnown RBP15.14■□□□□ 0.01
CLK3-203ENST00000454830 GOLGA6L9A6NEM1 432 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 KIF20AO95235 890 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 GCNT3O95395 438 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 ENOX2Q16206 610 aaKnown RBP15.14■□□□□ 0.01
CLK3-203ENST00000454830 CENPPQ6IPU0 288 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 TMTC1Q8IUR5 882 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 ZNF397Q8NF99 534 aaPredicted RBP15.14■□□□□ 0.01
CLK3-203ENST00000454830 ZBTB39O15060 712 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 VCAM1P19320 739 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 KCNJ6P48051 423 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 ZNF280AP59817 542 aaPredicted RBP15.14■□□□□ 0.01
CLK3-203ENST00000454830 SEMA3FQ13275 785 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 TRPM4Q8TD43 1214 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 ZBED3Q96IU2 234 aaPredicted RBP15.14■□□□□ 0.01
CLK3-203ENST00000454830 TEPSINQ96N21 525 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 CHP1Q99653 195 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 REEP2Q9BRK0 252 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 CRACR2AQ9BSW2 395 aa15.14■□□□□ 0.01
CLK3-203ENST00000454830 NAA15Q9BXJ9 866 aaKnown RBP15.14■□□□□ 0.01
CLK3-203ENST00000454830 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
CLK3-203ENST00000454830 PHF20L1A8MW92 1017 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 RSPH10B2B2RC85 870 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 NKRFO15226 690 aaKnown RBP eCLIP15.13■□□□□ 0.01
CLK3-203ENST00000454830 KIF5CO60282 957 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 ICAM1P05362 532 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 RSPH10BP0C881 870 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 TCERG1LQ5VWI1 586 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 CACNA2D4Q7Z3S7 1137 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 SMCR8Q8TEV9 937 aaPredicted RBP15.13■□□□□ 0.01
CLK3-203ENST00000454830 CCDC51Q96ER9 411 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 PIK3CDO00329 1044 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 IPO5O00410 1097 aaKnown RBP15.13■□□□□ 0.01
CLK3-203ENST00000454830 PRPF6O94906 941 aaKnown RBP15.13■□□□□ 0.01
CLK3-203ENST00000454830 SP4Q02446 784 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 MYCT1Q8N699 235 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 BANK1Q8NDB2 785 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 LPAR1Q92633 364 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 TEKT3Q9BXF9 490 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 NDST4Q9H3R1 872 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 AGPAT5Q9NUQ2 364 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 GREB1LQ9C091 1923 aaPredicted RBP15.13■□□□□ 0.01
CLK3-203ENST00000454830 ITIH6Q6UXX5 1313 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 TESPA1A2RU30 521 aaPredicted RBP15.13■□□□□ 0.01
CLK3-203ENST00000454830 FKBP3Q00688 224 aaKnown RBP15.13■□□□□ 0.01
CLK3-203ENST00000454830 LRRC63Q05C16 580 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 ATG4CQ96DT6 458 aa15.13■□□□□ 0.01
CLK3-203ENST00000454830 SLU7O95391 586 aaKnown RBP15.12■□□□□ 0.01
CLK3-203ENST00000454830 SPATA31C1P0DKV0 1188 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 CIITAP33076 1130 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 KIAA1328Q86T90 577 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 DEF6Q9H4E7 631 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 A0A0U1RQJ8 604 aa15.12■□□□□ 0.01
CLK3-203ENST00000454830 MMP14P50281 582 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms