RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 PPFIBP2Q8ND30 876 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 NGDNQ8NEJ9 315 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 IL17REQ8NFR9 667 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ACTRT1Q8TDG2 376 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CABLES1Q8TDN4 633 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 STK32AQ8WU08 396 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 NSMCE1Q8WV22 266 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ATXN2LQ8WWM7 1075 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 NELFBQ8WX92 580 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CTNNBL1Q8WYA6 563 aaPredicted RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CCT6BQ92526 530 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 IP6K1Q92551 441 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 VTI1AQ96AJ9 217 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 SUCLG2Q96I99 432 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 SEC16BQ96JE7 1060 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CAPZA3Q96KX2 299 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 RNPC3Q96LT9 517 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 RMDN2Q96LZ7 410 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ZIM3Q96PE6 472 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 MPHOSPH6Q99547 160 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 UBAC1Q9BSL1 405 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 TMEM109Q9BVC6 243 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 TRIM4Q9C037 500 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CCDC8Q9H0W5 538 aaPredicted RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 TMEM134Q9H6X4 195 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 NHEJ1Q9H9Q4 299 aaPredicted RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 SUGCTQ9HAC7 445 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 SENP2Q9HC62 589 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 NCOA5Q9HCD5 579 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 HMX1Q9NP08 348 aaPredicted RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 SH3GLB2Q9NR46 395 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 PAPOLBQ9NRJ5 636 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 SAMSN1Q9NSI8 373 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 HAUS2Q9NVX0 235 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 NDUFA13Q9P0J0 144 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ZFATQ9P243 1243 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CEP126Q9P2H0 1117 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 STOML1Q9UBI4 398 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 DDX20Q9UHI6 824 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 SCOCQ9UIL1 159 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CNOT7Q9UIV1 285 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ANAPC4Q9UJX5 808 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 INTUQ9ULD6 942 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 TPX2Q9ULW0 747 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 TMCO1Q9UM00 188 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 HPS5Q9UPZ3 1129 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 CTNND2Q9UQB3 1225 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 LRCH1Q9Y2L9 728 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 PCDHGC5Q9Y5F6 944 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 USH1CQ9Y6N9 552 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 NUP188Q5SRE5 1749 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 SETD1BQ9UPS6 1966 aaKnown RBP3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 ADAMTS13Q76LX8 1427 aa3.78□□□□□ -1.8
AC006539.3-201ENST00000454258 PLCH1Q4KWH8 1693 aa3.78□□□□□ -1.81
AC006539.3-201ENST00000454258 MYH6P13533 1939 aa3.78□□□□□ -1.81
AC006539.3-201ENST00000454258 ROBO2Q9HCK4 1378 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 SYNGAP1Q96PV0 1343 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 PRR36Q9H6K5 1346 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 A0A0A6YYK5 440 aaPredicted RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 TTC26A0AVF1 554 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 MACROD2A1Z1Q3 448 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 FAM187AA6NFU0 413 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 NBPF26B4DH59 902 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 PPP1R3GB7ZBB8 358 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 KIF28PB7ZC32 967 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 hCG_1984214I3L0E3 225 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 EYA2O00167 538 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 PODXLO00592 558 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 CTNND1O60716 968 aaKnown RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 SMIM24O75264 130 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 PPFIA2O75334 1257 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 RHOBTB3O94955 611 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 GAS8O95995 478 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 PENKP01210 267 aaPredicted RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 RPN1P04843 607 aaKnown RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 SERPING1P05155 500 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 ATP5BP06576 529 aaKnown RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 SNRPA1P09661 255 aaKnown RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 PARP1P09874 1014 aaKnown RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 CPA3P15088 417 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 DESP17661 470 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 COL9A1P20849 921 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 PAX7P23759 505 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 CCNE1P24864 410 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 ARID4AP29374 1257 aaPredicted RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 CCT6AP40227 531 aaKnown RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 PSMC4P43686 418 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 MTIF2P46199 727 aaKnown RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 DRG2P55039 364 aaKnown RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 NPEPPSP55786 919 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 RPL26P61254 145 aaKnown RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 HERVK_113P62684 666 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 IRX4P78413 519 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 ELF3P78545 371 aaPredicted RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 HDLBPQ00341 1268 aaKnown RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 CAV1Q03135 178 aa3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 PTPN12Q05209 780 aaKnown RBP3.77□□□□□ -1.81
AC006539.3-201ENST00000454258 C2orf54Q08AI8 447 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms