RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 LGALS2P05162 132 aa16.68■□□□□ 0.26
HSPG2-207ENST00000453796 ACRP10323 421 aa16.68■□□□□ 0.26
HSPG2-207ENST00000453796 SMAD3P84022 425 aaKnown RBP16.68■□□□□ 0.26
HSPG2-207ENST00000453796 AP3B2Q13367 1082 aa16.68■□□□□ 0.26
HSPG2-207ENST00000453796 ZNF365Q70YC5 407 aa16.68■□□□□ 0.26
HSPG2-207ENST00000453796 SCLYQ96I15 445 aa16.68■□□□□ 0.26
HSPG2-207ENST00000453796 CDHR1Q96JP9 859 aa16.68■□□□□ 0.26
HSPG2-207ENST00000453796 LARP6Q9BRS8 491 aaKnown RBP16.68■□□□□ 0.26
HSPG2-207ENST00000453796 ALG1Q9BT22 464 aa16.68■□□□□ 0.26
HSPG2-207ENST00000453796 ANO3Q9BYT9 981 aa16.68■□□□□ 0.26
HSPG2-207ENST00000453796 EHMT1Q9H9B1 1298 aa16.68■□□□□ 0.26
HSPG2-207ENST00000453796 JADE2Q9NQC1 790 aa16.68■□□□□ 0.26
HSPG2-207ENST00000453796 TMEM260Q9NX78 707 aa16.68■□□□□ 0.26
HSPG2-207ENST00000453796 MAFGO15525 162 aa16.67■□□□□ 0.26
HSPG2-207ENST00000453796 HOXC8P31273 242 aa16.67■□□□□ 0.26
HSPG2-207ENST00000453796 SREBF1P36956 1147 aa16.67■□□□□ 0.26
HSPG2-207ENST00000453796 CHMP4BP1P59074 171 aa16.67■□□□□ 0.26
HSPG2-207ENST00000453796 RBL2Q08999 1139 aa16.67■□□□□ 0.26
HSPG2-207ENST00000453796 MTMR1Q13613 665 aa16.67■□□□□ 0.26
HSPG2-207ENST00000453796 HIC1Q14526 733 aa16.67■□□□□ 0.26
HSPG2-207ENST00000453796 PTGISQ16647 500 aa16.67■□□□□ 0.26
HSPG2-207ENST00000453796 FAM109BQ6ICB4 259 aaPredicted RBP16.67■□□□□ 0.26
HSPG2-207ENST00000453796 PSRC1Q6PGN9 363 aaPredicted RBP16.67■□□□□ 0.26
HSPG2-207ENST00000453796 Q7L0L9 218 aa16.67■□□□□ 0.26
HSPG2-207ENST00000453796 CRYGNQ8WXF5 182 aa16.67■□□□□ 0.26
HSPG2-207ENST00000453796 DHX38Q92620 1227 aaKnown RBP16.67■□□□□ 0.26
HSPG2-207ENST00000453796 MXRA8Q9BRK3 442 aa16.67■□□□□ 0.26
HSPG2-207ENST00000453796 PDRG1Q9NUG6 133 aa16.67■□□□□ 0.26
HSPG2-207ENST00000453796 H3BRB1 525 aa16.66■□□□□ 0.26
HSPG2-207ENST00000453796 PPFIA3O75145 1194 aa16.66■□□□□ 0.26
HSPG2-207ENST00000453796 SEC24BO95487 1268 aa16.66■□□□□ 0.26
HSPG2-207ENST00000453796 C7orf31Q8N865 590 aa16.66■□□□□ 0.26
HSPG2-207ENST00000453796 GIMAP8Q8ND71 665 aaPredicted RBP16.66■□□□□ 0.26
HSPG2-207ENST00000453796 CYP2W1Q8TAV3 490 aa16.66■□□□□ 0.26
HSPG2-207ENST00000453796 HERVK_113Q902F9 699 aa16.66■□□□□ 0.26
HSPG2-207ENST00000453796 SLC26A6Q9BXS9 759 aa16.66■□□□□ 0.26
HSPG2-207ENST00000453796 TUT1Q9H6E5 874 aaKnown RBP16.66■□□□□ 0.26
HSPG2-207ENST00000453796 WDR81Q562E7 1941 aa16.66■□□□□ 0.26
HSPG2-207ENST00000453796 CDH23Q9H251 3354 aa16.65■□□□□ 0.26
HSPG2-207ENST00000453796 PTPRSQ13332 1948 aa16.65■□□□□ 0.26
HSPG2-207ENST00000453796 NOP56O00567 594 aaKnown RBP16.65■□□□□ 0.26
HSPG2-207ENST00000453796 IQCF3P0C7M6 154 aa16.65■□□□□ 0.26
HSPG2-207ENST00000453796 BFSP2Q13515 415 aa16.65■□□□□ 0.26
HSPG2-207ENST00000453796 DEFB123Q8N688 67 aa16.65■□□□□ 0.26
HSPG2-207ENST00000453796 CAGE1Q8TC20 777 aa16.65■□□□□ 0.26
HSPG2-207ENST00000453796 CCDC12Q8WUD4 166 aaPredicted RBP16.65■□□□□ 0.26
HSPG2-207ENST00000453796 KCNH7Q9NS40 1196 aa16.65■□□□□ 0.26
HSPG2-207ENST00000453796 MTMR10Q9NXD2 777 aa16.65■□□□□ 0.26
HSPG2-207ENST00000453796 COL6A3P12111 3177 aa16.65■□□□□ 0.26
HSPG2-207ENST00000453796 GSTTP1A0A1W2PQM5 241 aa16.64■□□□□ 0.25
HSPG2-207ENST00000453796 MEIS1O00470 390 aa16.64■□□□□ 0.25
HSPG2-207ENST00000453796 FGBP02675 491 aa16.64■□□□□ 0.25
HSPG2-207ENST00000453796 ARHGAP4P98171 946 aa16.64■□□□□ 0.25
HSPG2-207ENST00000453796 ZNF200P98182 395 aaPredicted RBP16.64■□□□□ 0.25
HSPG2-207ENST00000453796 AKAP17AQ02040 695 aaKnown RBP16.64■□□□□ 0.25
HSPG2-207ENST00000453796 PTK7Q13308 1070 aa16.64■□□□□ 0.25
HSPG2-207ENST00000453796 TRIM71Q2Q1W2 868 aaKnown RBP16.64■□□□□ 0.25
HSPG2-207ENST00000453796 CEP55Q53EZ4 464 aa16.64■□□□□ 0.25
HSPG2-207ENST00000453796 JAKMIP3Q5VZ66 844 aa16.64■□□□□ 0.25
HSPG2-207ENST00000453796 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
HSPG2-207ENST00000453796 RPUSD2Q8IZ73 545 aaKnown RBP16.64■□□□□ 0.25
HSPG2-207ENST00000453796 WNT8BQ93098 351 aa16.64■□□□□ 0.25
HSPG2-207ENST00000453796 C6orf50Q9HD87 102 aa16.64■□□□□ 0.25
HSPG2-207ENST00000453796 SH3GLB2Q9NR46 395 aa16.64■□□□□ 0.25
HSPG2-207ENST00000453796 CXXC1Q9P0U4 656 aaPredicted RBP16.64■□□□□ 0.25
HSPG2-207ENST00000453796 NOD1Q9Y239 953 aa16.64■□□□□ 0.25
HSPG2-207ENST00000453796 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.63■□□□□ 0.25
HSPG2-207ENST00000453796 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.63■□□□□ 0.25
HSPG2-207ENST00000453796 PFKMP08237 780 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 CYP3A4P08684 503 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 ARP10275 920 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 GNA11P29992 359 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 RFC2P35250 354 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 TCF7P36402 384 aaPredicted RBP16.63■□□□□ 0.25
HSPG2-207ENST00000453796 SP4Q02446 784 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 SCRN1Q12765 414 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 STK3Q13188 491 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 GPNMBQ14956 572 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 MCTP2Q6DN12 878 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 NIPA1Q7RTP0 329 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 REXO1Q8N1G1 1221 aaKnown RBP16.63■□□□□ 0.25
HSPG2-207ENST00000453796 CCDC155Q8N6L0 562 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 CCDC148Q8NFR7 591 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 AFAP1L1Q8TED9 768 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 VPS54Q9P1Q0 977 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 TPCN1Q9ULQ1 816 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 NFASCO94856 1347 aa16.63■□□□□ 0.25
HSPG2-207ENST00000453796 SIP14410 1827 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 IGLV3-22A0A075B6J6 115 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 FAM86B1E9PN63 330 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 EDIL3O43854 480 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 EIF5BO60841 1220 aaKnown RBP16.62■□□□□ 0.25
HSPG2-207ENST00000453796 FAM86B2P0C5J1 330 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 SMIM10L2AP0DMW4 78 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 SMIM10L2BP0DMW5 78 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 CKBP12277 381 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 AK2P54819 239 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 ADAM17P78536 824 aa16.62■□□□□ 0.25
HSPG2-207ENST00000453796 SSRP1Q08945 709 aaKnown RBP16.62■□□□□ 0.25
HSPG2-207ENST00000453796 UTP14CQ5TAP6 766 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms