RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 ICAM3P32942 547 aa20.64■□□□□ 0.89
SQSTM1-204ENST00000453046 FGD1P98174 961 aa20.64■□□□□ 0.89
SQSTM1-204ENST00000453046 PCNX4Q63HM2 1172 aa20.64■□□□□ 0.89
SQSTM1-204ENST00000453046 APOA5Q6Q788 366 aa20.64■□□□□ 0.89
SQSTM1-204ENST00000453046 CYFIP1Q7L576 1253 aa20.64■□□□□ 0.89
SQSTM1-204ENST00000453046 HEATR3Q7Z4Q2 680 aa20.64■□□□□ 0.89
SQSTM1-204ENST00000453046 NLRX1Q86UT6 975 aa20.64■□□□□ 0.89
SQSTM1-204ENST00000453046 FBXL16Q8N461 479 aa20.64■□□□□ 0.89
SQSTM1-204ENST00000453046 VWCEQ96DN2 955 aa20.64■□□□□ 0.89
SQSTM1-204ENST00000453046 GAS2L1Q99501 681 aaPredicted RBP20.64■□□□□ 0.89
SQSTM1-204ENST00000453046 NKX2-4Q9H2Z4 354 aa20.64■□□□□ 0.89
SQSTM1-204ENST00000453046 SPATA31C2B4DYI2 1134 aa20.63■□□□□ 0.89
SQSTM1-204ENST00000453046 ZBTB43O43298 467 aa20.63■□□□□ 0.89
SQSTM1-204ENST00000453046 SELPP16109 830 aa20.63■□□□□ 0.89
SQSTM1-204ENST00000453046 RABGGTBP53611 331 aa20.63■□□□□ 0.89
SQSTM1-204ENST00000453046 AK2P54819 239 aa20.63■□□□□ 0.89
SQSTM1-204ENST00000453046 EXOSC10Q01780 885 aaKnown RBP20.63■□□□□ 0.89
SQSTM1-204ENST00000453046 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.63■□□□□ 0.893e-7■■■□□ 14.7
SQSTM1-204ENST00000453046 DAXXQ9UER7 740 aaPredicted RBP20.63■□□□□ 0.89
SQSTM1-204ENST00000453046 NAP1L2Q9ULW6 460 aaPredicted RBP20.63■□□□□ 0.89
SQSTM1-204ENST00000453046 SPDYE3A6NKU9 549 aa20.62■□□□□ 0.89
SQSTM1-204ENST00000453046 PTK7Q13308 1070 aa20.62■□□□□ 0.89
SQSTM1-204ENST00000453046 RTN1Q16799 776 aa20.62■□□□□ 0.89
SQSTM1-204ENST00000453046 METTL7BQ6UX53 244 aa20.62■□□□□ 0.89
SQSTM1-204ENST00000453046 LRRC8DQ7L1W4 858 aa20.62■□□□□ 0.89
SQSTM1-204ENST00000453046 DHX38Q92620 1227 aaKnown RBP20.62■□□□□ 0.89
SQSTM1-204ENST00000453046 CTAGE1Q96RT6 745 aa20.62■□□□□ 0.89
SQSTM1-204ENST00000453046 C16orf70Q9BSU1 422 aa20.62■□□□□ 0.89
SQSTM1-204ENST00000453046 AGXT2Q9BYV1 514 aa20.62■□□□□ 0.89
SQSTM1-204ENST00000453046 PRDM12Q9H4Q4 367 aa20.62■□□□□ 0.89
SQSTM1-204ENST00000453046 BCAS3Q9H6U6 928 aa20.62■□□□□ 0.89
SQSTM1-204ENST00000453046 YBX2Q9Y2T7 364 aaKnown RBP20.62■□□□□ 0.89
SQSTM1-204ENST00000453046 H3BRB1 525 aa20.61■□□□□ 0.89
SQSTM1-204ENST00000453046 PARNO95453 639 aaKnown RBP20.61■□□□□ 0.89
SQSTM1-204ENST00000453046 LGALS2P05162 132 aa20.61■□□□□ 0.89
SQSTM1-204ENST00000453046 CKBP12277 381 aa20.61■□□□□ 0.89
SQSTM1-204ENST00000453046 ZNF200P98182 395 aaPredicted RBP20.61■□□□□ 0.89
SQSTM1-204ENST00000453046 SP4Q02446 784 aa20.61■□□□□ 0.89
SQSTM1-204ENST00000453046 SEMA3FQ13275 785 aa20.61■□□□□ 0.89
SQSTM1-204ENST00000453046 UBE2SQ16763 222 aa20.61■□□□□ 0.89
SQSTM1-204ENST00000453046 TUT1Q9H6E5 874 aaKnown RBP20.61■□□□□ 0.89
SQSTM1-204ENST00000453046 BRPF3Q9ULD4 1205 aa20.61■□□□□ 0.89
SQSTM1-204ENST00000453046 PCDHA11Q9Y5I1 949 aa20.61■□□□□ 0.89
SQSTM1-204ENST00000453046 SCN5AQ14524 2016 aa20.61■□□□□ 0.89
SQSTM1-204ENST00000453046 KLF18A0A0U1RQI7 1052 aa20.6■□□□□ 0.89
SQSTM1-204ENST00000453046 C17orf102A2RUQ5 167 aa20.6■□□□□ 0.89
SQSTM1-204ENST00000453046 GOLGA8AA7E2F4 631 aa20.6■□□□□ 0.89
SQSTM1-204ENST00000453046 GOLGA8BA8MQT2 603 aa20.6■□□□□ 0.89
SQSTM1-204ENST00000453046 NAPAP54920 295 aa20.6■□□□□ 0.89
SQSTM1-204ENST00000453046 PPP2R2DQ66LE6 453 aa20.6■□□□□ 0.89
SQSTM1-204ENST00000453046 GIMAP8Q8ND71 665 aaPredicted RBP20.6■□□□□ 0.89
SQSTM1-204ENST00000453046 CDHR1Q96JP9 859 aa20.6■□□□□ 0.89
SQSTM1-204ENST00000453046 SLC9A7Q96T83 725 aa20.6■□□□□ 0.89
SQSTM1-204ENST00000453046 SENP7Q9BQF6 1050 aa20.6■□□□□ 0.89
SQSTM1-204ENST00000453046 EHMT1Q9H9B1 1298 aa20.6■□□□□ 0.89
SQSTM1-204ENST00000453046 LIMCH1Q9UPQ0 1083 aa20.6■□□□□ 0.89
SQSTM1-204ENST00000453046 BAIAP3O94812 1187 aa20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 KCNJ6P48051 423 aa20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 RBL2Q08999 1139 aa20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 TOB2Q14106 344 aaPredicted RBP20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 UTP14CQ5TAP6 766 aaKnown RBP20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 Q6ZUG5 572 aa20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 PHOSPHO2Q8TCD6 241 aa20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 ATP6V0A1Q93050 837 aa20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 GPRASP2Q96D09 838 aa20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 GPR20Q99678 358 aa20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 SH2B1Q9NRF2 756 aaPredicted RBP20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 ZNF215Q9UL58 517 aaPredicted RBP20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 PCDHA6Q9UN73 950 aa20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 PCDHA8Q9Y5H6 950 aa20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 TRIP12Q14669 1992 aaPredicted RBP20.59■□□□□ 0.89
SQSTM1-204ENST00000453046 CNTNAP5Q8WYK1 1306 aa20.58■□□□□ 0.89
SQSTM1-204ENST00000453046 KIF28PB7ZC32 967 aa20.58■□□□□ 0.89
SQSTM1-204ENST00000453046 SMIM10L2AP0DMW4 78 aa20.58■□□□□ 0.89
SQSTM1-204ENST00000453046 SMIM10L2BP0DMW5 78 aa20.58■□□□□ 0.89
SQSTM1-204ENST00000453046 MYOGP15173 224 aa20.58■□□□□ 0.89
SQSTM1-204ENST00000453046 WWC2Q6AWC2 1192 aa20.58■□□□□ 0.89
SQSTM1-204ENST00000453046 ZSCAN31Q96LW9 406 aaPredicted RBP20.58■□□□□ 0.89
SQSTM1-204ENST00000453046 V9GY48 417 aaPredicted RBP20.58■□□□□ 0.89
SQSTM1-204ENST00000453046 TANC1Q9C0D5 1861 aa20.58■□□□□ 0.88
SQSTM1-204ENST00000453046 UNC80Q8N2C7 3258 aa20.57■□□□□ 0.88
SQSTM1-204ENST00000453046 IGFBP4P22692 258 aa20.57■□□□□ 0.88
SQSTM1-204ENST00000453046 THPOP40225 353 aa20.57■□□□□ 0.88
SQSTM1-204ENST00000453046 MYO9BQ13459 2157 aa20.57■□□□□ 0.88
SQSTM1-204ENST00000453046 MTMR1Q13613 665 aa20.57■□□□□ 0.88
SQSTM1-204ENST00000453046 HIC1Q14526 733 aa20.57■□□□□ 0.88
SQSTM1-204ENST00000453046 ZNF618Q5T7W0 954 aa20.57■□□□□ 0.88
SQSTM1-204ENST00000453046 CNKSR3Q6P9H4 555 aa20.57■□□□□ 0.88
SQSTM1-204ENST00000453046 PPM1EQ8WY54 764 aa20.57■□□□□ 0.88
SQSTM1-204ENST00000453046 TMX3Q96JJ7 454 aa20.57■□□□□ 0.88
SQSTM1-204ENST00000453046 EYSQ5T1H1 3165 aa20.56■□□□□ 0.88
SQSTM1-204ENST00000453046 hCG_1984214I3L0E3 225 aa20.56■□□□□ 0.88
SQSTM1-204ENST00000453046 NBNO60934 754 aa20.56■□□□□ 0.88
SQSTM1-204ENST00000453046 GNAT1P11488 350 aa20.56■□□□□ 0.88
SQSTM1-204ENST00000453046 METAP2P50579 478 aaKnown RBP eCLIP20.56■□□□□ 0.88
SQSTM1-204ENST00000453046 GPNMBQ14956 572 aa20.56■□□□□ 0.88
SQSTM1-204ENST00000453046 TRIM71Q2Q1W2 868 aaKnown RBP20.56■□□□□ 0.88
SQSTM1-204ENST00000453046 PPP1R18Q6NYC8 613 aa20.56■□□□□ 0.88
SQSTM1-204ENST00000453046 SERINC5Q86VE9 423 aa20.56■□□□□ 0.88
SQSTM1-204ENST00000453046 ZNF713Q8N859 430 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms