RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SGCZQ96LD1 299 aa5.17□□□□□ -1.58
HMGB3P21-201ENST00000452483 MFSD14AQ96MC6 490 aa5.17□□□□□ -1.58
HMGB3P21-201ENST00000452483 NECAB3Q96P71 396 aaPredicted RBP5.17□□□□□ -1.58
HMGB3P21-201ENST00000452483 MTFR1LQ9H019 292 aa5.17□□□□□ -1.58
HMGB3P21-201ENST00000452483 UNC45AQ9H3U1 944 aa5.17□□□□□ -1.58
HMGB3P21-201ENST00000452483 FAM105AQ9NUU6 356 aa5.17□□□□□ -1.58
HMGB3P21-201ENST00000452483 GPR52Q9Y2T5 361 aa5.17□□□□□ -1.58
HMGB3P21-201ENST00000452483 PCDHB14Q9Y5E9 798 aa5.17□□□□□ -1.58
HMGB3P21-201ENST00000452483 SLC12A7Q9Y666 1083 aa5.17□□□□□ -1.58
HMGB3P21-201ENST00000452483 SYNGAP1Q96PV0 1343 aa5.17□□□□□ -1.58
HMGB3P21-201ENST00000452483 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 SYNDIG1LA6NDD5 238 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 LRRC10BA6NIK2 292 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 FAM155AB1AL88 458 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 NCAM2O15394 837 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 PQBP1O60828 265 aaKnown RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 INMTO95050 263 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 CD4P01730 458 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 JMJD7P0C870 316 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 BPIP17213 487 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 PSMA3P25788 255 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 CTNNA1P35221 906 aaKnown RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 SCNN1BP51168 640 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 USP14P54578 494 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 MPP1Q00013 466 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 PLIN5Q00G26 463 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 PFKPQ01813 784 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 BTKQ06187 659 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 PPFIA1Q13136 1202 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 ZNF460Q14592 562 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 SART3Q15020 963 aaKnown RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 PLCB4Q15147 1175 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 PCBP2Q15366 365 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 TERF2Q15554 542 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 NFKBIBQ15653 356 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 KIF4BQ2VIQ3 1234 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 CFAP100Q494V2 611 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 PRR16Q569H4 304 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 IFIT1BQ5T764 474 aaKnown RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 YOD1Q5VVQ6 348 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 SPATA1Q5VX52 437 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 MAP1SQ66K74 1059 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 FASTKD5Q7L8L6 764 aaKnown RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 GALNT5Q7Z7M9 940 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 CBARPQ8N350 705 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 ZNF713Q8N859 430 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 SHKBP1Q8TBC3 707 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 SEC62Q99442 399 aaKnown RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 TM9SF2Q99805 663 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 XPO4Q9C0E2 1151 aaKnown RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 SEMA6CQ9H3T2 930 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 GSX1Q9H4S2 264 aaPredicted RBP5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 ACSS3Q9H6R3 686 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 ARFGAP3Q9NP61 516 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 ZFP64Q9NPA5 681 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 CRTAC1Q9NQ79 661 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 ARHGEF4Q9NR80 690 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 NDOR1Q9UHB4 597 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 PPP1R9AQ9ULJ8 1098 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 PCDHGC5Q9Y5F6 944 aa5.16□□□□□ -1.58
HMGB3P21-201ENST00000452483 ANKRD18BA2A2Z9 1011 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 FAM221AA4D161 298 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 TRIM64CA6NLI5 447 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 M0R2C6 588 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 PLOD3O60568 738 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 PAGE1O75459 146 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 ARIH2O95376 493 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 ASLP04424 464 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 TPM2P07951 284 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 IDEP14735 1019 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 RPS6KB1P23443 525 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 ARNTP27540 789 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 ASPAP45381 313 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 CD97P48960 835 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 SUMO1P63165 101 aaKnown RBP5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 ID3Q02535 119 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZNF252P-AS1Q0IIN9 211 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 HSP90AA2PQ14568 343 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 SV2CQ496J9 727 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 CCDC158Q5M9N0 1113 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 KIAA1614Q5VZ46 1190 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 KIAA1211LQ6NV74 962 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 HIBCHQ6NVY1 386 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 TLDC1Q6P9B6 456 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 TMCO3Q6UWJ1 677 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 UBE2R2Q712K3 238 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 CHST15Q7LFX5 561 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 BRAPQ7Z569 592 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 C11orf74Q86VG3 221 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 ARL6IP6Q8N6S5 226 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 AFAP1L1Q8TED9 768 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 BTN2A2Q8WVV5 523 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 ZMAT2Q96NC0 199 aaKnown RBP5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 NUP88Q99567 741 aaPredicted RBP5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 BARD1Q99728 777 aaKnown RBP5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 EMILIN2Q9BXX0 1053 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 WDR12Q9GZL7 423 aaKnown RBP5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 ATXN3LQ9H3M9 355 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 FAM204AQ9H8W3 233 aa5.15□□□□□ -1.59
HMGB3P21-201ENST00000452483 EHMT1Q9H9B1 1298 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms