RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 CDHR1Q96JP9 859 aa14.8□□□□□ -0.04
CHD3-206ENST00000452447 BCAS3Q9H6U6 928 aa14.8□□□□□ -0.04
CHD3-206ENST00000452447 BRPF3Q9ULD4 1205 aa14.8□□□□□ -0.04
CHD3-206ENST00000452447 PCDHA11Q9Y5I1 949 aa14.8□□□□□ -0.04
CHD3-206ENST00000452447 KLF18A0A0U1RQI7 1052 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 C17orf102A2RUQ5 167 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 LGALS2P05162 132 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 NEFLP07196 543 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 NAPAP54920 295 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 ZNF200P98182 395 aaPredicted RBP14.79□□□□□ -0.04
CHD3-206ENST00000452447 SP4Q02446 784 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 RBL2Q08999 1139 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 UBE2SQ16763 222 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 PPP2R2DQ66LE6 453 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 DHX38Q92620 1227 aaKnown RBP14.79□□□□□ -0.04
CHD3-206ENST00000452447 SLC9A7Q96T83 725 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 GPR20Q99678 358 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 PRDM12Q9H4Q4 367 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 EHMT1Q9H9B1 1298 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 ZNF215Q9UL58 517 aaPredicted RBP14.79□□□□□ -0.04
CHD3-206ENST00000452447 YBX2Q9Y2T7 364 aaKnown RBP14.79□□□□□ -0.04
CHD3-206ENST00000452447 CNTNAP5Q8WYK1 1306 aa14.79□□□□□ -0.04
CHD3-206ENST00000452447 GOLGA8AA7E2F4 631 aa14.78□□□□□ -0.04
CHD3-206ENST00000452447 GOLGA8BA8MQT2 603 aa14.78□□□□□ -0.04
CHD3-206ENST00000452447 KIF28PB7ZC32 967 aa14.78□□□□□ -0.04
CHD3-206ENST00000452447 BAIAP3O94812 1187 aa14.78□□□□□ -0.04
CHD3-206ENST00000452447 REC8O95072 547 aa14.78□□□□□ -0.04
CHD3-206ENST00000452447 KCNJ6P48051 423 aa14.78□□□□□ -0.04
CHD3-206ENST00000452447 PHOSPHO2Q8TCD6 241 aa14.78□□□□□ -0.04
CHD3-206ENST00000452447 GPRASP2Q96D09 838 aa14.78□□□□□ -0.04
CHD3-206ENST00000452447 PCDHA6Q9UN73 950 aa14.78□□□□□ -0.04
CHD3-206ENST00000452447 PCDHA8Q9Y5H6 950 aa14.78□□□□□ -0.04
CHD3-206ENST00000452447 V9GY48 417 aaPredicted RBP14.78□□□□□ -0.04
CHD3-206ENST00000452447 SMIM10L2AP0DMW4 78 aa14.77□□□□□ -0.04
CHD3-206ENST00000452447 SMIM10L2BP0DMW5 78 aa14.77□□□□□ -0.04
CHD3-206ENST00000452447 GNAT1P11488 350 aa14.77□□□□□ -0.04
CHD3-206ENST00000452447 MYOGP15173 224 aa14.77□□□□□ -0.04
CHD3-206ENST00000452447 HSPA4P34932 840 aa14.77□□□□□ -0.04
CHD3-206ENST00000452447 RCAN1P53805 252 aa14.77□□□□□ -0.04
CHD3-206ENST00000452447 UTP14CQ5TAP6 766 aaKnown RBP14.77□□□□□ -0.04
CHD3-206ENST00000452447 WWC2Q6AWC2 1192 aa14.77□□□□□ -0.04
CHD3-206ENST00000452447 ATP6V0A1Q93050 837 aa14.77□□□□□ -0.04
CHD3-206ENST00000452447 JAKMIP1Q96N16 626 aaKnown RBP14.77□□□□□ -0.04
CHD3-206ENST00000452447 CCDC196A0A1B0GTZ2 297 aa14.77□□□□□ -0.05
CHD3-206ENST00000452447 hCG_1984214I3L0E3 225 aa14.77□□□□□ -0.05
CHD3-206ENST00000452447 MAFGO15525 162 aa14.77□□□□□ -0.05
CHD3-206ENST00000452447 ITGB5P18084 799 aa14.77□□□□□ -0.05
CHD3-206ENST00000452447 MTMR1Q13613 665 aa14.77□□□□□ -0.05
CHD3-206ENST00000452447 ZNF618Q5T7W0 954 aa14.77□□□□□ -0.05
CHD3-206ENST00000452447 PPP1R18Q6NYC8 613 aa14.77□□□□□ -0.05
CHD3-206ENST00000452447 CNKSR3Q6P9H4 555 aa14.77□□□□□ -0.05
CHD3-206ENST00000452447 BLOC1S2Q6QNY1 142 aa14.77□□□□□ -0.05
CHD3-206ENST00000452447 TEX2Q8IWB9 1127 aa14.77□□□□□ -0.05
CHD3-206ENST00000452447 ZNF713Q8N859 430 aaPredicted RBP14.77□□□□□ -0.05
CHD3-206ENST00000452447 RNPEPQ9H4A4 650 aa14.77□□□□□ -0.05
CHD3-206ENST00000452447 RIC8AQ9NPQ8 531 aa14.77□□□□□ -0.05
CHD3-206ENST00000452447 NBNO60934 754 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 CXCL10P02778 98 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 CPA1P15085 419 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 THPOP40225 353 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 METAP2P50579 478 aaKnown RBP eCLIP14.76□□□□□ -0.05
CHD3-206ENST00000452447 ADCY7P51828 1080 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 FUT2Q10981 343 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 HIC1Q14526 733 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 GPNMBQ14956 572 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 TRIM71Q2Q1W2 868 aaKnown RBP14.76□□□□□ -0.05
CHD3-206ENST00000452447 Q6ZUG5 572 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 SERINC5Q86VE9 423 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 TRIM50Q86XT4 487 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 HERC6Q8IVU3 1022 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 KCNB2Q92953 911 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 WNT8BQ93098 351 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 GLT8D2Q9H1C3 349 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 SNX14Q9Y5W7 946 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 UBIAD1Q9Y5Z9 338 aa14.76□□□□□ -0.05
CHD3-206ENST00000452447 EMSYQ7Z589 1322 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 SMCO2A6NFE2 343 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 RSPH10B2B2RC85 870 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 TREHO43280 583 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 ATP9AO75110 1047 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 FOSP01100 380 aaPredicted RBP14.75□□□□□ -0.05
CHD3-206ENST00000452447 CA3P07451 260 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 RSPH10BP0C881 870 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 KCNA2P16389 499 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 IGFBP4P22692 258 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 PSMA5P28066 241 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 CDC27P30260 824 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 TCF7P36402 384 aaPredicted RBP14.75□□□□□ -0.05
CHD3-206ENST00000452447 APOBRQ0VD83 1088 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 IKBKEQ14164 716 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 TYW1BQ6NUM6 668 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 PPM1EQ8WY54 764 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 BRF1Q92994 677 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 JADE2Q9NQC1 790 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 FAM217BQ9NTX9 383 aaPredicted RBP14.75□□□□□ -0.05
CHD3-206ENST00000452447 SETD4Q9NVD3 440 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 BARHL2Q9NY43 387 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 PKD2L1Q9P0L9 805 aa14.75□□□□□ -0.05
CHD3-206ENST00000452447 PRRC2BQ5JSZ5 2229 aaKnown RBP14.75□□□□□ -0.05
CHD3-206ENST00000452447 TTC28Q96AY4 2481 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms