RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 CCDC51Q96ER9 411 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 MASTLQ96GX5 879 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 RTFDC1Q9BY42 306 aaPredicted RBP12.3□□□□□ -0.44
DDR1-239ENST00000452441 MTMR4Q9NYA4 1195 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 TAF1P21675 1872 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 LGALS16A8MUM7 142 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 CETN3O15182 167 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 SLC9C1Q4G0N8 1177 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 SBK1Q52WX2 424 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 ADSSL1Q8N142 457 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 AFAP1L1Q8TED9 768 aa12.3□□□□□ -0.44
DDR1-239ENST00000452441 MYH6P13533 1939 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 MYH2Q9UKX2 1941 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 MAP2K7O14733 419 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 SFMBT2Q5VUG0 894 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 SH3RF1Q7Z6J0 888 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 EHBP1Q8NDI1 1231 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 U2AF1L4Q8WU68 220 aaKnown RBP12.29□□□□□ -0.44
DDR1-239ENST00000452441 BHMT2Q9H2M3 363 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 DDX4Q9NQI0 724 aaKnown RBP12.29□□□□□ -0.44
DDR1-239ENST00000452441 RGL1Q9NZL6 768 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 STXBP3O00186 592 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 WHAMMP3Q1A5X7 153 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 ASPRV1Q53RT3 343 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 CERKQ8TCT0 537 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 COG1Q8WTW3 980 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 EPB41L5Q9HCM4 733 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 MYO1AQ9UBC5 1043 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 LCMT1Q9UIC8 334 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 L1RE1Q9UN81 338 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 PDHBP11177 359 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 ACTN2P35609 894 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 QRICH1Q2TAL8 776 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 ARHGEF10LQ9HCE6 1279 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 PI4KBQ9UBF8 816 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 GINS2Q9Y248 185 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
DDR1-239ENST00000452441 PCDHA13Q9Y5I0 950 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 ANKRD36CQ5JPF3 1778 aa12.29□□□□□ -0.44
DDR1-239ENST00000452441 COL1A1P02452 1464 aaPredicted RBP12.28□□□□□ -0.44
DDR1-239ENST00000452441 TESPA1A2RU30 521 aaPredicted RBP12.28□□□□□ -0.44
DDR1-239ENST00000452441 PPP1R12BO60237 982 aaPredicted RBP12.28□□□□□ -0.44
DDR1-239ENST00000452441 CCT5P48643 541 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 ADCY1Q08828 1119 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 TRIM14Q14142 442 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 PDXDC2PQ6P474 469 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 NIM1KQ8IY84 436 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 GOLGA5Q8TBA6 731 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 NOX5Q96PH1 765 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 LRRC1Q9BTT6 524 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 DNM3Q9UQ16 869 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 DISP2A7MBM2 1401 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 F5H6K3 240 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 BUB1BO60566 1050 aaPredicted RBP12.28□□□□□ -0.44
DDR1-239ENST00000452441 VAV2P52735 878 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 KLRC3Q07444 240 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 CFAP58Q5T655 872 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 SH2D3CQ8N5H7 860 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 FAM76AQ8TAV0 307 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 HDAC7Q8WUI4 952 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 CCDC127Q96BQ5 260 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 BICD1Q96G01 975 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 PPANQ9NQ55 473 aaKnown RBP12.28□□□□□ -0.44
DDR1-239ENST00000452441 FEZ2Q9UHY8 353 aaPredicted RBP12.28□□□□□ -0.44
DDR1-239ENST00000452441 FZD1Q9UP38 647 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 ATP6V0A2Q9Y487 856 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 NHSL1Q5SYE7 1610 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 CHD4Q14839 1912 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 GPR75-ASB3A0A0A6YYF3 556 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 MYO1CO00159 1063 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 ADRA2BP18089 450 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 GGCXP38435 758 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 ARHGAP25P42331 645 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 VPS41P49754 854 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 TNIP1Q15025 636 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 EEPD1Q7L9B9 569 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 SP8Q8IXZ3 490 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 MSANTD4Q8NCY6 345 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 IPO4Q8TEX9 1081 aaKnown RBP12.28□□□□□ -0.44
DDR1-239ENST00000452441 NFU1Q9UMS0 254 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 LRP5O75197 1615 aa12.28□□□□□ -0.44
DDR1-239ENST00000452441 RCCD1A6NED2 376 aa12.27□□□□□ -0.44
DDR1-239ENST00000452441 ZSCAN5CA6NGD5 496 aaPredicted RBP12.27□□□□□ -0.44
DDR1-239ENST00000452441 CCDC169A6NNP5 214 aa12.27□□□□□ -0.44
DDR1-239ENST00000452441 EPHB6O15197 1021 aa12.27□□□□□ -0.44
DDR1-239ENST00000452441 KIAA0754O94854 1291 aa12.27□□□□□ -0.44
DDR1-239ENST00000452441 ASIC2Q16515 512 aa12.27□□□□□ -0.44
DDR1-239ENST00000452441 KCNK18Q7Z418 384 aa12.27□□□□□ -0.44
DDR1-239ENST00000452441 AMNQ9BXJ7 453 aa12.27□□□□□ -0.44
DDR1-239ENST00000452441 IKZF4Q9H2S9 585 aa12.27□□□□□ -0.44
DDR1-239ENST00000452441 LIMA1Q9UHB6 759 aaKnown RBP12.27□□□□□ -0.44
DDR1-239ENST00000452441 CAPN6Q9Y6Q1 641 aa12.27□□□□□ -0.44
DDR1-239ENST00000452441 LRRIQ3A6PVS8 624 aaPredicted RBP12.27□□□□□ -0.45
DDR1-239ENST00000452441 EEF1GP26641 437 aaKnown RBP12.27□□□□□ -0.45
DDR1-239ENST00000452441 LIG3P49916 1009 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 VWA3BQ502W6 1294 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 CNKSR1Q969H4 720 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 PNMA6FA0A0J9YX94 578 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 SHTN1A0MZ66 631 aa12.27□□□□□ -0.45
DDR1-239ENST00000452441 GFPT2O94808 682 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms