RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 AIFM3Q96NN9 605 aa18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 MLXIPQ9HAP2 919 aa18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 C6orf50Q9HD87 102 aa18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 VPS54Q9P1Q0 977 aa18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 UMODL1Q5DID0 1318 aa18.43■□□□□ 0.54
SCAMP4-205ENST00000452128 IGLV3-22A0A075B6J6 115 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 FAM86B1E9PN63 330 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 SORBS3O60504 671 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 DEXIO95424 95 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 FAM86B2P0C5J1 330 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 ARP10275 920 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 FDPSP14324 419 aaKnown RBP18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 PSEN2P49810 448 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 NEK4P51957 841 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 ARHGAP4P98171 946 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 CEP55Q53EZ4 464 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 MCTP2Q6DN12 878 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 GDF6Q6KF10 455 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 NIPA1Q7RTP0 329 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 CCDC12Q8WUD4 166 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 CDHR1Q96JP9 859 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 SLKQ9H2G2 1235 aaPredicted RBP18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 KCNH7Q9NS40 1196 aa18.42■□□□□ 0.54
SCAMP4-205ENST00000452128 GSTTP1A0A1W2PQM5 241 aa18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 SUPT20HL2P0C7V6 817 aa18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 ZNF286BP0CG31 522 aa18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 CYP2C9P11712 490 aa18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 GNA11P29992 359 aa18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 CIITAP33076 1130 aa18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 CYP2C18P33260 490 aa18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 AKAP17AQ02040 695 aaKnown RBP18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 MTMR1Q13613 665 aa18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 RASGRP4Q8TDF6 673 aa18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 DHX38Q92620 1227 aaKnown RBP18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 WNT8AQ9H1J5 351 aa18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 HDAC6Q9UBN7 1215 aa18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 GTF2IRD1Q9UHL9 959 aa18.41■□□□□ 0.54
SCAMP4-205ENST00000452128 CPLX1O14810 134 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 DHX15O43143 795 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 DTNBO60941 627 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 LGALS2P05162 132 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 RBL2Q08999 1139 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 ITGB3BPQ13352 177 aaPredicted RBP18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 MFSD10Q14728 455 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 GPNMBQ14956 572 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 KIAA0753Q2KHM9 967 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 RASIP1Q5U651 963 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 TRIM22Q8IYM9 498 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 REXO1Q8N1G1 1221 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 NECAB1Q8N987 351 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 DAGLBQ8NCG7 672 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 GIMAP8Q8ND71 665 aaPredicted RBP18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 GTF3C6Q969F1 213 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 LENG9Q96B70 501 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 HIPK3Q9H422 1215 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 EHMT1Q9H9B1 1298 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 AGO4Q9HCK5 861 aaKnown RBP18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 STK36Q9NRP7 1315 aa18.4■□□□□ 0.54
SCAMP4-205ENST00000452128 MYH7BA7E2Y1 1941 aa18.39■□□□□ 0.53
SCAMP4-205ENST00000452128 CSF2RAP15509 400 aa18.39■□□□□ 0.53
SCAMP4-205ENST00000452128 ADAM17P78536 824 aa18.39■□□□□ 0.53
SCAMP4-205ENST00000452128 FPGSQ05932 587 aa18.39■□□□□ 0.53
SCAMP4-205ENST00000452128 TRIM71Q2Q1W2 868 aaKnown RBP18.39■□□□□ 0.53
SCAMP4-205ENST00000452128 TMEM240Q5SV17 173 aa18.39■□□□□ 0.53
SCAMP4-205ENST00000452128 CCDC148Q8NFR7 591 aa18.39■□□□□ 0.53
SCAMP4-205ENST00000452128 PCYT2Q99447 389 aa18.39■□□□□ 0.53
SCAMP4-205ENST00000452128 PCDHA4Q9UN74 947 aa18.39■□□□□ 0.53
SCAMP4-205ENST00000452128 NFASCO94856 1347 aa18.39■□□□□ 0.53
SCAMP4-205ENST00000452128 H3BRB1 525 aa18.38■□□□□ 0.53
SCAMP4-205ENST00000452128 ATG7O95352 703 aa18.38■□□□□ 0.53
SCAMP4-205ENST00000452128 ZNF200P98182 395 aaPredicted RBP18.38■□□□□ 0.53
SCAMP4-205ENST00000452128 CPLX2Q6PUV4 134 aaKnown RBP18.38■□□□□ 0.53
SCAMP4-205ENST00000452128 TRAF7Q6Q0C0 670 aa18.38■□□□□ 0.53
SCAMP4-205ENST00000452128 BICD2Q8TD16 824 aa18.38■□□□□ 0.53
SCAMP4-205ENST00000452128 LRCH3Q96II8 777 aa18.38■□□□□ 0.53
SCAMP4-205ENST00000452128 PHF20Q9BVI0 1012 aa18.38■□□□□ 0.53
SCAMP4-205ENST00000452128 KATNAL1Q9BW62 490 aa18.38■□□□□ 0.53
SCAMP4-205ENST00000452128 PPP1R12CQ9BZL4 782 aa18.38■□□□□ 0.53
SCAMP4-205ENST00000452128 TUT1Q9H6E5 874 aaKnown RBP18.38■□□□□ 0.53
SCAMP4-205ENST00000452128 PITPNM1O00562 1244 aa18.37■□□□□ 0.53
SCAMP4-205ENST00000452128 LGR5O75473 907 aa18.37■□□□□ 0.53
SCAMP4-205ENST00000452128 CDKL5O76039 1030 aa18.37■□□□□ 0.53
SCAMP4-205ENST00000452128 PTGISQ16647 500 aa18.37■□□□□ 0.53
SCAMP4-205ENST00000452128 GALNT17Q6IS24 598 aa18.37■□□□□ 0.53
SCAMP4-205ENST00000452128 TRIM50Q86XT4 487 aa18.37■□□□□ 0.53
SCAMP4-205ENST00000452128 NSUN7Q8NE18 718 aaKnown RBP18.37■□□□□ 0.53
SCAMP4-205ENST00000452128 SEPT1Q8WYJ6 367 aa18.37■□□□□ 0.53
SCAMP4-205ENST00000452128 WNT8BQ93098 351 aa18.37■□□□□ 0.53
SCAMP4-205ENST00000452128 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.37■□□□□ 0.531e-8■□□□□ 8.6
SCAMP4-205ENST00000452128 ALG1Q9BT22 464 aa18.37■□□□□ 0.53
SCAMP4-205ENST00000452128 C22orf23Q9BZE7 217 aa18.37■□□□□ 0.53
SCAMP4-205ENST00000452128 GJB4Q9NTQ9 266 aa18.37■□□□□ 0.53
SCAMP4-205ENST00000452128 IGKV6D-21A0A0A0MT36 114 aa18.36■□□□□ 0.53
SCAMP4-205ENST00000452128 CCNE2O96020 404 aa18.36■□□□□ 0.53
SCAMP4-205ENST00000452128 USP11P51784 963 aa18.36■□□□□ 0.53
SCAMP4-205ENST00000452128 NLRP5P59047 1200 aa18.36■□□□□ 0.53
SCAMP4-205ENST00000452128 PPIGQ13427 754 aaKnown RBP eCLIP18.36■□□□□ 0.535e-11■□□□□ 9.3
SCAMP4-205ENST00000452128 FAM47CQ5HY64 1035 aa18.36■□□□□ 0.53
SCAMP4-205ENST00000452128 GPR153Q6NV75 609 aa18.36■□□□□ 0.53
SCAMP4-205ENST00000452128 BLIDQ8IZY5 108 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms