RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 CDHR1Q96JP9 859 aa24.81■■□□□ 1.56
C9orf3-208ENST00000451893 INPP4AQ96PE3 977 aaPredicted RBP24.81■■□□□ 1.56
C9orf3-208ENST00000451893 GOLGA8AA7E2F4 631 aa24.8■■□□□ 1.56
C9orf3-208ENST00000451893 GOLGA8BA8MQT2 603 aa24.8■■□□□ 1.56
C9orf3-208ENST00000451893 H3BRB1 525 aa24.8■■□□□ 1.56
C9orf3-208ENST00000451893 MEIS2O14770 477 aa24.8■■□□□ 1.56
C9orf3-208ENST00000451893 BAIAP3O94812 1187 aa24.8■■□□□ 1.56
C9orf3-208ENST00000451893 LGALS2P05162 132 aa24.8■■□□□ 1.56
C9orf3-208ENST00000451893 CKBP12277 381 aa24.8■■□□□ 1.56
C9orf3-208ENST00000451893 ICAM3P32942 547 aa24.8■■□□□ 1.56
C9orf3-208ENST00000451893 NAPAP54920 295 aa24.8■■□□□ 1.56
C9orf3-208ENST00000451893 UTP14CQ5TAP6 766 aaKnown RBP24.8■■□□□ 1.56
C9orf3-208ENST00000451893 APOA5Q6Q788 366 aa24.8■■□□□ 1.56
C9orf3-208ENST00000451893 TUT1Q9H6E5 874 aaKnown RBP24.8■■□□□ 1.56
C9orf3-208ENST00000451893 YBX2Q9Y2T7 364 aaKnown RBP24.8■■□□□ 1.56
C9orf3-208ENST00000451893 KAT6AQ92794 2004 aa24.79■■□□□ 1.56
C9orf3-208ENST00000451893 SPATA31C2B4DYI2 1134 aa24.79■■□□□ 1.56
C9orf3-208ENST00000451893 HAS3O00219 553 aa24.79■■□□□ 1.56
C9orf3-208ENST00000451893 UBE2SQ16763 222 aa24.79■■□□□ 1.56
C9orf3-208ENST00000451893 ATP6V0A1Q93050 837 aa24.79■■□□□ 1.56
C9orf3-208ENST00000451893 KLF18A0A0U1RQI7 1052 aa24.78■■□□□ 1.56
C9orf3-208ENST00000451893 GNAT1P11488 350 aa24.78■■□□□ 1.56
C9orf3-208ENST00000451893 HOXD8P13378 290 aaPredicted RBP24.78■■□□□ 1.56
C9orf3-208ENST00000451893 ANAPC15P60006 121 aa24.78■■□□□ 1.56
C9orf3-208ENST00000451893 COL9A3Q14050 684 aaPredicted RBP24.78■■□□□ 1.56
C9orf3-208ENST00000451893 PHOSPHO2Q8TCD6 241 aa24.78■■□□□ 1.56
C9orf3-208ENST00000451893 ZBED2Q9BTP6 218 aa24.78■■□□□ 1.56
C9orf3-208ENST00000451893 MYOGP15173 224 aa24.77■■□□□ 1.56
C9orf3-208ENST00000451893 THPOP40225 353 aa24.77■■□□□ 1.56
C9orf3-208ENST00000451893 ZNF200P98182 395 aaPredicted RBP24.77■■□□□ 1.56
C9orf3-208ENST00000451893 CNKSR3Q6P9H4 555 aa24.77■■□□□ 1.56
C9orf3-208ENST00000451893 DHX38Q92620 1227 aaKnown RBP24.77■■□□□ 1.56
C9orf3-208ENST00000451893 C16orf70Q9BSU1 422 aa24.77■■□□□ 1.56
C9orf3-208ENST00000451893 PKD2L1Q9P0L9 805 aa24.77■■□□□ 1.56
C9orf3-208ENST00000451893 TET1Q8NFU7 2136 aa24.77■■□□□ 1.56
C9orf3-208ENST00000451893 SMIM10L2AP0DMW4 78 aa24.76■■□□□ 1.55
C9orf3-208ENST00000451893 SMIM10L2BP0DMW5 78 aa24.76■■□□□ 1.55
C9orf3-208ENST00000451893 MTMR1Q13613 665 aa24.76■■□□□ 1.55
C9orf3-208ENST00000451893 ADCK5Q3MIX3 580 aa24.76■■□□□ 1.55
C9orf3-208ENST00000451893 GPRASP2Q96D09 838 aa24.76■■□□□ 1.55
C9orf3-208ENST00000451893 GPR20Q99678 358 aa24.76■■□□□ 1.55
C9orf3-208ENST00000451893 SENP7Q9BQF6 1050 aa24.76■■□□□ 1.55
C9orf3-208ENST00000451893 PCDHA6Q9UN73 950 aa24.76■■□□□ 1.55
C9orf3-208ENST00000451893 PCDHA8Q9Y5H6 950 aa24.76■■□□□ 1.55
C9orf3-208ENST00000451893 TLL1O43897 1013 aa24.75■■□□□ 1.55
C9orf3-208ENST00000451893 CA3P07451 260 aa24.75■■□□□ 1.55
C9orf3-208ENST00000451893 ADCY7P51828 1080 aa24.75■■□□□ 1.55
C9orf3-208ENST00000451893 BECN1Q14457 450 aa24.75■■□□□ 1.55
C9orf3-208ENST00000451893 TSGA10IPQ3SY00 556 aa24.75■■□□□ 1.55
C9orf3-208ENST00000451893 ZNF618Q5T7W0 954 aa24.75■■□□□ 1.55
C9orf3-208ENST00000451893 RASEFQ8IZ41 740 aa24.75■■□□□ 1.55
C9orf3-208ENST00000451893 MICALL1Q8N3F8 863 aa24.75■■□□□ 1.55
C9orf3-208ENST00000451893 IL17RAQ96F46 866 aa24.75■■□□□ 1.55
C9orf3-208ENST00000451893 JAKMIP1Q96N16 626 aaKnown RBP24.75■■□□□ 1.55
C9orf3-208ENST00000451893 CNTNAP5Q8WYK1 1306 aa24.75■■□□□ 1.55
C9orf3-208ENST00000451893 CCDC196A0A1B0GTZ2 297 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 EFCAB14O75071 495 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 METAP2P50579 478 aaKnown RBP eCLIP24.74■■□□□ 1.55
C9orf3-208ENST00000451893 EXOSC10Q01780 885 aaKnown RBP24.74■■□□□ 1.55
C9orf3-208ENST00000451893 RBL2Q08999 1139 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 SEMA3FQ13275 785 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 IKBKEQ14164 716 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 WWC2Q6AWC2 1192 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 PPP1R18Q6NYC8 613 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 BLOC1S2Q6QNY1 142 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 HERC6Q8IVU3 1022 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 VWCEQ96DN2 955 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 CTAGE1Q96RT6 745 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 BCAS3Q9H6U6 928 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 BRPF3Q9ULD4 1205 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 V9GY48 417 aaPredicted RBP24.74■■□□□ 1.55
C9orf3-208ENST00000451893 EMSYQ7Z589 1322 aa24.74■■□□□ 1.55
C9orf3-208ENST00000451893 RSPH10B2B2RC85 870 aa24.73■■□□□ 1.55
C9orf3-208ENST00000451893 hCG_1984214I3L0E3 225 aa24.73■■□□□ 1.55
C9orf3-208ENST00000451893 RSPH10BP0C881 870 aa24.73■■□□□ 1.55
C9orf3-208ENST00000451893 ARHGAP4P98171 946 aa24.73■■□□□ 1.55
C9orf3-208ENST00000451893 TRIM50Q86XT4 487 aa24.73■■□□□ 1.55
C9orf3-208ENST00000451893 ZNF713Q8N859 430 aaPredicted RBP24.73■■□□□ 1.55
C9orf3-208ENST00000451893 GTPBP6O43824 516 aaPredicted RBP24.72■■□□□ 1.55
C9orf3-208ENST00000451893 NBNO60934 754 aa24.72■■□□□ 1.55
C9orf3-208ENST00000451893 TCF7P36402 384 aaPredicted RBP24.72■■□□□ 1.55
C9orf3-208ENST00000451893 WDR5P61964 334 aaKnown RBP24.72■■□□□ 1.55
C9orf3-208ENST00000451893 AKAP17AQ02040 695 aaKnown RBP24.72■■□□□ 1.55
C9orf3-208ENST00000451893 RABEP1Q15276 862 aa24.72■■□□□ 1.55
C9orf3-208ENST00000451893 CCDC85BQ15834 202 aaPredicted RBP24.72■■□□□ 1.55
C9orf3-208ENST00000451893 Q6ZUG5 572 aa24.72■■□□□ 1.55
C9orf3-208ENST00000451893 SERINC5Q86VE9 423 aa24.72■■□□□ 1.55
C9orf3-208ENST00000451893 GLG1Q92896 1179 aa24.72■■□□□ 1.55
C9orf3-208ENST00000451893 GLT8D2Q9H1C3 349 aa24.72■■□□□ 1.55
C9orf3-208ENST00000451893 TSPYL2Q9H2G4 693 aaPredicted RBP24.72■■□□□ 1.55
C9orf3-208ENST00000451893 RNPEPQ9H4A4 650 aa24.72■■□□□ 1.55
C9orf3-208ENST00000451893 CERS4Q9HA82 394 aa24.72■■□□□ 1.55
C9orf3-208ENST00000451893 ABHD14A-ACY1A0A1B0GW23 586 aa24.71■■□□□ 1.55
C9orf3-208ENST00000451893 TREHO43280 583 aa24.71■■□□□ 1.55
C9orf3-208ENST00000451893 FOSP01100 380 aaPredicted RBP24.71■■□□□ 1.55
C9orf3-208ENST00000451893 PSMA5P28066 241 aa24.71■■□□□ 1.55
C9orf3-208ENST00000451893 HSPA4P34932 840 aa24.71■■□□□ 1.55
C9orf3-208ENST00000451893 ZNF76P36508 570 aa24.71■■□□□ 1.55
C9orf3-208ENST00000451893 SDF4Q9BRK5 362 aa24.71■■□□□ 1.55
C9orf3-208ENST00000451893 RIC8AQ9NPQ8 531 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms