RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 IFT74Q96LB3 600 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 ELAC2Q9BQ52 826 aaKnown RBP9.44□□□□□ -0.9
LSM5-208ENST00000450169 DNAAF2Q9NVR5 837 aaKnown RBP9.44□□□□□ -0.9
LSM5-208ENST00000450169 NWD2Q9ULI1 1742 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 MYH13Q9UKX3 1938 aa9.44□□□□□ -0.9
LSM5-208ENST00000450169 MOXD2PA6NHM9 499 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 C19orf67A6NJJ6 358 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 UBE2Q2LH0YL09 131 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 RAD51CO43502 376 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 WFS1O76024 890 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 SRGNP10124 158 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 SP100P23497 879 aaPredicted RBP9.43□□□□□ -0.9
LSM5-208ENST00000450169 EEF1GP26641 437 aaKnown RBP9.43□□□□□ -0.9
LSM5-208ENST00000450169 ECHS1P30084 290 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 CTDSPL2Q05D32 466 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 KLC1Q07866 573 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 CUL1Q13616 776 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 MYBPC3Q14896 1274 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 DBN1Q16643 649 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 KRT71Q3SY84 523 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 AMOTQ4VCS5 1084 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 CMPK2Q5EBM0 449 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 RNF220Q5VTB9 566 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 KIF2BQ8N4N8 673 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 MIPOL1Q8TD10 442 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 STAMQ92783 540 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 SYMPKQ92797 1274 aaKnown RBP9.43□□□□□ -0.9
LSM5-208ENST00000450169 PBXIP1Q96AQ6 731 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 RBM17Q96I25 401 aaKnown RBP9.43□□□□□ -0.9
LSM5-208ENST00000450169 RPS6KC1Q96S38 1066 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 RAB17Q9H0T7 212 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 ZWILCHQ9H900 591 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 ARHGEF3Q9NR81 526 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.43□□□□□ -0.9
LSM5-208ENST00000450169 MYH7P12883 1935 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 GRID2IPA4D2P6 1211 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 PLEKP08567 350 aaPredicted RBP9.43□□□□□ -0.9
LSM5-208ENST00000450169 MYBP10242 640 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 GNAZP19086 355 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 GBP1P32455 592 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 COPS2P61201 443 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 ERVK-9P63128 1117 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 TNNC1P63316 161 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 NTRK3Q16288 839 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 PROSER3Q2NL68 480 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 KLHDC7AQ5VTJ3 777 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 LRRC34Q8IZ02 419 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 SYCP3Q8IZU3 236 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 GBP7Q8N8V2 638 aaPredicted RBP9.43□□□□□ -0.9
LSM5-208ENST00000450169 FGD4Q96M96 766 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 TRAPPC9Q96Q05 1148 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 SLC26A6Q9BXS9 759 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 KRT23Q9C075 422 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 BLZF1Q9H2G9 400 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 VCXQ9H320 206 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 FOXP1Q9H334 677 aaPredicted RBP9.43□□□□□ -0.9
LSM5-208ENST00000450169 THAP9Q9H5L6 903 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 FBXL5Q9UKA1 691 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 PHF24Q9UPV7 400 aa9.43□□□□□ -0.9
LSM5-208ENST00000450169 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.43□□□□□ -0.9
LSM5-208ENST00000450169 XDHP47989 1333 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 STK36Q9NRP7 1315 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 E7ENQ6 273 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 FOXP2O15409 715 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 SART1O43290 800 aaKnown RBP9.42□□□□□ -0.9
LSM5-208ENST00000450169 FGAP02671 866 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 CHN1P15882 459 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 KIF11P52732 1056 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 SFSWAPQ12872 951 aaKnown RBP9.42□□□□□ -0.9
LSM5-208ENST00000450169 GALNTL6Q49A17 601 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 ZNF658Q5TYW1 1059 aaPredicted RBP9.42□□□□□ -0.9
LSM5-208ENST00000450169 TYW1BQ6NUM6 668 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 TRIM42Q8IWZ5 723 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 ATXN2LQ8WWM7 1075 aaKnown RBP9.42□□□□□ -0.9
LSM5-208ENST00000450169 WASF1Q92558 559 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 NOX5Q96PH1 765 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 NSRP1Q9H0G5 558 aaKnown RBP9.42□□□□□ -0.9
LSM5-208ENST00000450169 TMEM165Q9HC07 324 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 EXOC1Q9NV70 894 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 DLGAP2Q9P1A6 1054 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 KCNJ14Q9UNX9 436 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 MAPK8IP1Q9UQF2 711 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 THRAP3Q9Y2W1 955 aaKnown RBP9.42□□□□□ -0.9
LSM5-208ENST00000450169 CYP27B1O15528 508 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 ZBTB43O43298 467 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 KCNQ3O43525 872 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 ZPR1O75312 459 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 STAT6P42226 847 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 PSMC4P43686 418 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 KLK7P49862 253 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
LSM5-208ENST00000450169 SSRP1Q08945 709 aaKnown RBP9.42□□□□□ -0.9
LSM5-208ENST00000450169 BNIP1Q12981 228 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 NR5A1Q13285 461 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 KIAA0825Q8IV33 1275 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 KLHL7Q8IXQ5 586 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 NBPF15Q8N660 670 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 OSBP2Q969R2 916 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 TLCD1Q96CP7 247 aa9.42□□□□□ -0.9
LSM5-208ENST00000450169 OPTNQ96CV9 577 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms