RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 SLC4A7Q9Y6M7 1214 aa14.21□□□□□ -0.13
MSH5-209ENST00000450148 MICAL3Q7RTP6 2002 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 KLF18A0A0U1RQI7 1052 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 H3BRB1 525 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 NBNO60934 754 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 CXCL10P02778 98 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 HMGB1P09429 215 aaKnown RBP14.2□□□□□ -0.14
MSH5-209ENST00000450148 MYOGP15173 224 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 FOSL2P15408 326 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 KCNA2P16389 499 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 MBTPS1Q14703 1052 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 TCTN1Q2MV58 587 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 LRRC8DQ7L1W4 858 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 HEATR3Q7Z4Q2 680 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 FBXL16Q8N461 479 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 CCDC155Q8N6L0 562 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 MAFAQ8NHW3 353 aaPredicted RBP14.2□□□□□ -0.14
MSH5-209ENST00000450148 GPRASP2Q96D09 838 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 TUT1Q9H6E5 874 aaKnown RBP14.2□□□□□ -0.14
MSH5-209ENST00000450148 MSRAQ9UJ68 235 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 NID2Q14112 1375 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 SIP14410 1827 aa14.2□□□□□ -0.14
MSH5-209ENST00000450148 GOLGA8AA7E2F4 631 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 GOLGA8BA8MQT2 603 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 ZBBXA8MT70 800 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 STXBP3O00186 592 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 ATP2A2P16615 1042 aaKnown RBP14.19□□□□□ -0.14
MSH5-209ENST00000450148 ADD1P35611 737 aaKnown RBP14.19□□□□□ -0.14
MSH5-209ENST00000450148 ADAM17P78536 824 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 ZNF618Q5T7W0 954 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 NLRX1Q86UT6 975 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 SERINC5Q86VE9 423 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 TRIM50Q86XT4 487 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 JAKMIP1Q96N16 626 aaKnown RBP14.19□□□□□ -0.14
MSH5-209ENST00000450148 USP26Q9BXU7 913 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 RNPEPQ9H4A4 650 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 RIC8AQ9NPQ8 531 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 PCDHA11Q9Y5I1 949 aa14.19□□□□□ -0.14
MSH5-209ENST00000450148 V9GY48 417 aaPredicted RBP14.19□□□□□ -0.14
MSH5-209ENST00000450148 NOP56O00567 594 aaKnown RBP14.18□□□□□ -0.14
MSH5-209ENST00000450148 SMIM10L2AP0DMW4 78 aa14.18□□□□□ -0.14
MSH5-209ENST00000450148 SMIM10L2BP0DMW5 78 aa14.18□□□□□ -0.14
MSH5-209ENST00000450148 ACTN1P12814 892 aa14.18□□□□□ -0.14
MSH5-209ENST00000450148 CLK2P49760 499 aaKnown RBP14.18□□□□□ -0.14
MSH5-209ENST00000450148 APOBRQ0VD83 1088 aa14.18□□□□□ -0.14
MSH5-209ENST00000450148 ADGRE1Q14246 886 aa14.18□□□□□ -0.14
MSH5-209ENST00000450148 PPP1R18Q6NYC8 613 aa14.18□□□□□ -0.14
MSH5-209ENST00000450148 Q6ZUG5 572 aa14.18□□□□□ -0.14
MSH5-209ENST00000450148 PHOSPHO2Q8TCD6 241 aa14.18□□□□□ -0.14
MSH5-209ENST00000450148 SLC9A7Q96T83 725 aa14.18□□□□□ -0.14
MSH5-209ENST00000450148 PRDM12Q9H4Q4 367 aa14.18□□□□□ -0.14
MSH5-209ENST00000450148 JADE2Q9NQC1 790 aa14.18□□□□□ -0.14
MSH5-209ENST00000450148 GSTTP1A0A1W2PQM5 241 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 C17orf102A2RUQ5 167 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 SPDYE3A6NKU9 549 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 hCG_1984214I3L0E3 225 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 TREHO43280 583 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 BAIAP3O94812 1187 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 ARHGEF15O94989 841 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 PARNO95453 639 aaKnown RBP14.17□□□□□ -0.14
MSH5-209ENST00000450148 RPS6KB1P23443 525 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 NAPAP54920 295 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 MKRN4PQ13434 485 aaPredicted RBP14.17□□□□□ -0.14
MSH5-209ENST00000450148 BLOC1S2Q6QNY1 142 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 TEX2Q8IWB9 1127 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.17□□□□□ -0.14
MSH5-209ENST00000450148 ZNF713Q8N859 430 aaPredicted RBP14.17□□□□□ -0.14
MSH5-209ENST00000450148 USP38Q8NB14 1042 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 BRF1Q92994 677 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 PGBD1Q96JS3 809 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 FTOQ9C0B1 505 aaKnown RBP eCLIP14.17□□□□□ -0.14
MSH5-209ENST00000450148 BARHL2Q9NY43 387 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 WDR81Q562E7 1941 aa14.17□□□□□ -0.14
MSH5-209ENST00000450148 SMCO2A6NFE2 343 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 ADAMTS3O15072 1205 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 MAFGO15525 162 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 EPB41L2O43491 1005 aaKnown RBP14.16□□□□□ -0.14
MSH5-209ENST00000450148 REC8O95072 547 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 METAP2P50579 478 aaKnown RBP eCLIP14.16□□□□□ -0.14
MSH5-209ENST00000450148 EVCP57679 992 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 WDR5P61964 334 aaKnown RBP14.16□□□□□ -0.14
MSH5-209ENST00000450148 SP4Q02446 784 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 MTMR1Q13613 665 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 NTRK3Q16288 839 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 PKN1Q16512 942 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 PFKFB3Q16875 520 aaPredicted RBP14.16□□□□□ -0.14
MSH5-209ENST00000450148 CNKSR3Q6P9H4 555 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 HERC6Q8IVU3 1022 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 GIMAP8Q8ND71 665 aaPredicted RBP14.16□□□□□ -0.14
MSH5-209ENST00000450148 CYP2W1Q8TAV3 490 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 ATP6V0A1Q93050 837 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 CDHR1Q96JP9 859 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 MXRA8Q9BRK3 442 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 ANO3Q9BYT9 981 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 OSBPL7Q9BZF2 842 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 SLC28A3Q9HAS3 691 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 SETD4Q9NVD3 440 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 TMEM260Q9NX78 707 aa14.16□□□□□ -0.14
MSH5-209ENST00000450148 LOXHD1Q8IVV2 1947 aa14.15□□□□□ -0.14
MSH5-209ENST00000450148 DLL1O00548 723 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms