RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 BCAS3Q9H6U6 928 aa19.91■□□□□ 0.78
CLTCL1-203ENST00000449918 PCDHA11Q9Y5I1 949 aa19.91■□□□□ 0.78
CLTCL1-203ENST00000449918 CNTNAP5Q8WYK1 1306 aa19.91■□□□□ 0.78
CLTCL1-203ENST00000449918 hCG_1984214I3L0E3 225 aa19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 BAIAP3O94812 1187 aa19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 NAPAP54920 295 aa19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 FUT2Q10981 343 aa19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 WWC2Q6AWC2 1192 aa19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 PPP1R18Q6NYC8 613 aa19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 BLOC1S2Q6QNY1 142 aa19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 ZNF713Q8N859 430 aaPredicted RBP19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 SLC9A7Q96T83 725 aa19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 GLT8D2Q9H1C3 349 aa19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 NKX2-4Q9H2Z4 354 aa19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 ZNF215Q9UL58 517 aaPredicted RBP19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 SNX14Q9Y5W7 946 aa19.9■□□□□ 0.78
CLTCL1-203ENST00000449918 C17orf102A2RUQ5 167 aa19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 MAFGO15525 162 aa19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 GNAT1P11488 350 aa19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 ITGB5P18084 799 aa19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 PSMA5P28066 241 aa19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 RABGGTBP53611 331 aa19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 ZNF200P98182 395 aaPredicted RBP19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 MTMR1Q13613 665 aa19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 Q6ZUG5 572 aa19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 GAS2L1Q99501 681 aaPredicted RBP19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 RIC8AQ9NPQ8 531 aa19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 YBX2Q9Y2T7 364 aaKnown RBP19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 UBIAD1Q9Y5Z9 338 aa19.89■□□□□ 0.77
CLTCL1-203ENST00000449918 MYH7BA7E2Y1 1941 aa19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 FOSP01100 380 aaPredicted RBP19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 SMIM10L2AP0DMW4 78 aa19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 SMIM10L2BP0DMW5 78 aa19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 METAP2P50579 478 aaKnown RBP eCLIP19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 ADCY7P51828 1080 aa19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 SP4Q02446 784 aa19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 SERINC5Q86VE9 423 aa19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 ATP6V0A1Q93050 837 aa19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 JADE2Q9NQC1 790 aa19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 FAM217BQ9NTX9 383 aaPredicted RBP19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 BARHL2Q9NY43 387 aa19.88■□□□□ 0.77
CLTCL1-203ENST00000449918 SMCO2A6NFE2 343 aa19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 KIF28PB7ZC32 967 aa19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 EPB41L2O43491 1005 aaKnown RBP19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 CXCL10P02778 98 aa19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 CPA1P15085 419 aa19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 CDC27P30260 824 aa19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 KCNJ6P48051 423 aa19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 APOBRQ0VD83 1088 aa19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 TRIM71Q2Q1W2 868 aaKnown RBP19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 UTP14CQ5TAP6 766 aaKnown RBP19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 CNKSR3Q6P9H4 555 aa19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 FBXL16Q8N461 479 aa19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 BRF1Q92994 677 aa19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 PRDM12Q9H4Q4 367 aa19.87■□□□□ 0.77
CLTCL1-203ENST00000449918 STXBP3O00186 592 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 DLL1O00548 723 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 NBNO60934 754 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 ATP9AO75110 1047 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 KCNA2P16389 499 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 RPS6KB1P23443 525 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 HOXC8P31273 242 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 ADD1P35611 737 aaKnown RBP19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 THPOP40225 353 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 HIC1Q14526 733 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 GPNMBQ14956 572 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 ZNF618Q5T7W0 954 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 PPP2R2DQ66LE6 453 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 SEPT1Q8WYJ6 367 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 RNPEPQ9H4A4 650 aa19.86■□□□□ 0.77
CLTCL1-203ENST00000449918 EMSYQ7Z589 1322 aa19.85■□□□□ 0.77
CLTCL1-203ENST00000449918 ABHD14A-ACY1A0A1B0GW23 586 aa19.85■□□□□ 0.77
CLTCL1-203ENST00000449918 EFCAB14O75071 495 aa19.85■□□□□ 0.77
CLTCL1-203ENST00000449918 MYOGP15173 224 aa19.85■□□□□ 0.77
CLTCL1-203ENST00000449918 TCF7P36402 384 aaPredicted RBP19.85■□□□□ 0.77
CLTCL1-203ENST00000449918 TYW1BQ6NUM6 668 aa19.85■□□□□ 0.77
CLTCL1-203ENST00000449918 HERC6Q8IVU3 1022 aa19.85■□□□□ 0.77
CLTCL1-203ENST00000449918 WNT8BQ93098 351 aa19.85■□□□□ 0.77
CLTCL1-203ENST00000449918 MXRA8Q9BRK3 442 aa19.85■□□□□ 0.77
CLTCL1-203ENST00000449918 RSPH10B2B2RC85 870 aa19.84■□□□□ 0.77
CLTCL1-203ENST00000449918 TREHO43280 583 aa19.84■□□□□ 0.77
CLTCL1-203ENST00000449918 CAND2O75155 1236 aa19.84■□□□□ 0.77
CLTCL1-203ENST00000449918 RSPH10BP0C881 870 aa19.84■□□□□ 0.77
CLTCL1-203ENST00000449918 AP3B2Q13367 1082 aa19.84■□□□□ 0.77
CLTCL1-203ENST00000449918 IKBKEQ14164 716 aa19.84■□□□□ 0.77
CLTCL1-203ENST00000449918 PFKFB3Q16875 520 aaPredicted RBP19.84■□□□□ 0.77
CLTCL1-203ENST00000449918 TRAF7Q6Q0C0 670 aa19.84■□□□□ 0.77
CLTCL1-203ENST00000449918 TRIM50Q86XT4 487 aa19.84■□□□□ 0.77
CLTCL1-203ENST00000449918 SETD4Q9NVD3 440 aa19.84■□□□□ 0.77
CLTCL1-203ENST00000449918 TELO2Q9Y4R8 837 aa19.84■□□□□ 0.77
CLTCL1-203ENST00000449918 CDH23Q9H251 3354 aa19.84■□□□□ 0.77
CLTCL1-203ENST00000449918 SCN5AQ14524 2016 aa19.83■□□□□ 0.77
CLTCL1-203ENST00000449918 NRCAMQ92823 1304 aa19.83■□□□□ 0.77
CLTCL1-203ENST00000449918 SCG2P13521 617 aa19.83■□□□□ 0.77
CLTCL1-203ENST00000449918 WDR5P61964 334 aaKnown RBP19.83■□□□□ 0.77
CLTCL1-203ENST00000449918 AKAP17AQ02040 695 aaKnown RBP19.83■□□□□ 0.77
CLTCL1-203ENST00000449918 CCDC12Q8WUD4 166 aaPredicted RBP19.83■□□□□ 0.77
CLTCL1-203ENST00000449918 GLG1Q92896 1179 aa19.83■□□□□ 0.77
CLTCL1-203ENST00000449918 SDF4Q9BRK5 362 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms