RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 WNT8BQ93098 351 aa13.43□□□□□ -0.26
COPS7B-213ENST00000449174 YTHDC1Q96MU7 727 aaKnown RBP13.43□□□□□ -0.26
COPS7B-213ENST00000449174 SENP7Q9BQF6 1050 aa13.43□□□□□ -0.26
COPS7B-213ENST00000449174 SPZ1Q9BXG8 430 aa13.43□□□□□ -0.26
COPS7B-213ENST00000449174 ZNF215Q9UL58 517 aaPredicted RBP13.43□□□□□ -0.26
COPS7B-213ENST00000449174 COL4A6Q14031 1691 aa13.43□□□□□ -0.26
COPS7B-213ENST00000449174 REV3LO60673 3130 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 SGSM2O43147 1006 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 SMIM10L2AP0DMW4 78 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 SMIM10L2BP0DMW5 78 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 GNAQP50148 359 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 MRPS9P82933 396 aaKnown RBP13.42□□□□□ -0.26
COPS7B-213ENST00000449174 ZNF200P98182 395 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-213ENST00000449174 PTH1RQ03431 593 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-213ENST00000449174 SLC35G1Q2M3R5 365 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 PLEKHG4Q58EX7 1191 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 PCNX4Q63HM2 1172 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 KRT40Q6A162 431 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 TMCO2Q7Z6W1 182 aaPredicted RBP13.42□□□□□ -0.26
COPS7B-213ENST00000449174 TMTC2Q8N394 836 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 DBF4BQ8NFT6 615 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 SMARCC2Q8TAQ2 1214 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 IGDCC4Q8TDY8 1250 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 SEPT8Q92599 483 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 MAP4K1Q92918 833 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 RRP36Q96EU6 259 aaKnown RBP13.42□□□□□ -0.26
COPS7B-213ENST00000449174 SAMD11Q96NU1 681 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 SUGCTQ9HAC7 445 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 SEC63Q9UGP8 760 aaKnown RBP13.42□□□□□ -0.26
COPS7B-213ENST00000449174 TTC28Q96AY4 2481 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 XIRP2A4UGR9 3374 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 MYO9BQ13459 2157 aa13.42□□□□□ -0.26
COPS7B-213ENST00000449174 SORBS3O60504 671 aa13.41□□□□□ -0.26
COPS7B-213ENST00000449174 HTRA4P83105 476 aaPredicted RBP13.41□□□□□ -0.26
COPS7B-213ENST00000449174 HIC1Q14526 733 aa13.41□□□□□ -0.26
COPS7B-213ENST00000449174 TCTN1Q2MV58 587 aa13.41□□□□□ -0.26
COPS7B-213ENST00000449174 CASC1Q6TDU7 716 aa13.41□□□□□ -0.26
COPS7B-213ENST00000449174 NLRX1Q86UT6 975 aa13.41□□□□□ -0.26
COPS7B-213ENST00000449174 MB21D2Q8IYB1 491 aaPredicted RBP13.41□□□□□ -0.26
COPS7B-213ENST00000449174 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
COPS7B-213ENST00000449174 GDPD5Q8WTR4 605 aa13.41□□□□□ -0.26
COPS7B-213ENST00000449174 GPKOWQ92917 476 aaPredicted RBP eCLIP13.41□□□□□ -0.26
COPS7B-213ENST00000449174 CDHR1Q96JP9 859 aa13.41□□□□□ -0.26
COPS7B-213ENST00000449174 GPR20Q99678 358 aa13.41□□□□□ -0.26
COPS7B-213ENST00000449174 RNPEPQ9H4A4 650 aa13.41□□□□□ -0.26
COPS7B-213ENST00000449174 SENP2Q9HC62 589 aa13.41□□□□□ -0.26
COPS7B-213ENST00000449174 TREHO43280 583 aa13.4□□□□□ -0.26
COPS7B-213ENST00000449174 CALM1P0DP23 149 aa13.4□□□□□ -0.26
COPS7B-213ENST00000449174 CALM2P0DP24 149 aa13.4□□□□□ -0.26
COPS7B-213ENST00000449174 CALM3P0DP25 149 aa13.4□□□□□ -0.26
COPS7B-213ENST00000449174 PTPROQ16827 1216 aa13.4□□□□□ -0.26
COPS7B-213ENST00000449174 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.4□□□□□ -0.26
COPS7B-213ENST00000449174 CYFIP1Q7L576 1253 aa13.4□□□□□ -0.26
COPS7B-213ENST00000449174 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
COPS7B-213ENST00000449174 MYOCDQ8IZQ8 938 aa13.4□□□□□ -0.26
COPS7B-213ENST00000449174 FBXO22Q8NEZ5 403 aa13.4□□□□□ -0.26
COPS7B-213ENST00000449174 TMEM87BQ96K49 555 aa13.4□□□□□ -0.26
COPS7B-213ENST00000449174 NECAB3Q96P71 396 aaPredicted RBP13.4□□□□□ -0.26
COPS7B-213ENST00000449174 MTUS1Q9ULD2 1270 aa13.4□□□□□ -0.26
COPS7B-213ENST00000449174 MICAL3Q7RTP6 2002 aa13.4□□□□□ -0.26
COPS7B-213ENST00000449174 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 RPLP2P05387 115 aaKnown RBP13.39□□□□□ -0.27
COPS7B-213ENST00000449174 MCM5P33992 734 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 ANTXR2P58335 489 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 FAM26DQ5JW98 314 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 FAM117BQ6P1L5 589 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 TAF2Q6P1X5 1199 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 SPRED2Q7Z698 418 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 RPAINQ86UA6 219 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 TEX2Q8IWB9 1127 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 TOP1MTQ969P6 601 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 GPRASP2Q96D09 838 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 LY9Q9HBG7 655 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 RTEL1Q9NZ71 1219 aa13.39□□□□□ -0.27
COPS7B-213ENST00000449174 PRRC2BQ5JSZ5 2229 aaKnown RBP13.39□□□□□ -0.27
COPS7B-213ENST00000449174 TCF20Q9UGU0 1960 aaKnown RBP13.38□□□□□ -0.27
COPS7B-213ENST00000449174 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.38□□□□□ -0.27
COPS7B-213ENST00000449174 CCDC69A6NI79 296 aa13.38□□□□□ -0.27
COPS7B-213ENST00000449174 MEIS2O14770 477 aa13.38□□□□□ -0.27
COPS7B-213ENST00000449174 MAFGO15525 162 aa13.38□□□□□ -0.27
COPS7B-213ENST00000449174 ADAM17P78536 824 aa13.38□□□□□ -0.27
COPS7B-213ENST00000449174 SEMA3FQ13275 785 aa13.38□□□□□ -0.27
COPS7B-213ENST00000449174 PUS10Q3MIT2 529 aaKnown RBP13.38□□□□□ -0.27
COPS7B-213ENST00000449174 TIGD5Q53EQ6 642 aa13.38□□□□□ -0.27
COPS7B-213ENST00000449174 RSPH3Q86UC2 560 aa13.38□□□□□ -0.27
COPS7B-213ENST00000449174 MRPL38Q96DV4 380 aaKnown RBP13.38□□□□□ -0.27
COPS7B-213ENST00000449174 ZFP91Q96JP5 570 aaPredicted RBP13.38□□□□□ -0.27
COPS7B-213ENST00000449174 YME1L1Q96TA2 773 aa13.38□□□□□ -0.27
COPS7B-213ENST00000449174 SETD4Q9NVD3 440 aa13.38□□□□□ -0.27
COPS7B-213ENST00000449174 RBM8AQ9Y5S9 174 aaKnown RBP13.38□□□□□ -0.27
COPS7B-213ENST00000449174 PRC1O43663 620 aa13.37□□□□□ -0.27
COPS7B-213ENST00000449174 LIFRP42702 1097 aa13.37□□□□□ -0.27
COPS7B-213ENST00000449174 ARHGAP4P98171 946 aa13.37□□□□□ -0.27
COPS7B-213ENST00000449174 LEXMQ3ZCV2 418 aa13.37□□□□□ -0.27
COPS7B-213ENST00000449174 EPC2Q52LR7 807 aa13.37□□□□□ -0.27
COPS7B-213ENST00000449174 USP17L6PQ6QN14 398 aa13.37□□□□□ -0.27
COPS7B-213ENST00000449174 NFXL1Q6ZNB6 911 aa13.37□□□□□ -0.27
COPS7B-213ENST00000449174 LMBR1Q8WVP7 490 aa13.37□□□□□ -0.27
COPS7B-213ENST00000449174 PIBF1Q8WXW3 757 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 304.2 ms