RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	POTEB	Q6S5H4	581 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	ZC3H3	Q8IXZ2	948 aa	Known RBP	18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	KCTD10	Q9H3F6	313 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	VIPAS39	Q9H9C1	493 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	CEP72	Q9P209	647 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058		A0A0U1RQG5	324 aa	Predicted RBP	18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	MEIS2	O14770	477 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	TRIM37	O94972	964 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	GNA14	O95837	355 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	ERCC3	P19447	782 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	GYS2	P54840	703 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	CCDC40	Q4G0X9	1142 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	GPBP1	Q86WP2	473 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	CREG2	Q8IUH2	290 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	SIAH1	Q8IUQ4	282 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	TRIM59	Q8IWR1	403 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	SLFN12	Q8IYM2	578 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	NLGN1	Q8N2Q7	840 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	TXLNB	Q8N3L3	684 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	SYN2	Q92777	582 aa	Predicted RBP	18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	TANGO6	Q9C0B7	1094 aa		18.73	■□□□□ 0.59
TOM1-210	ENST00000449058	DDTL	A6NHG4	134 aa	Predicted RBP	18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	FAM196B	A6NMK8	535 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058		G3V3G9	751 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	RBAK-RBAKDN	I3L0D1	243 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	NOL4	O94818	638 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	ITIH3	Q06033	890 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	CERKL	Q49MI3	558 aa	Predicted RBP	18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	DCAF8	Q5TAQ9	597 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	IQCE	Q6IPM2	695 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	CACNA2D4	Q7Z3S7	1137 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	PODN	Q7Z5L7	613 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	CAGE1	Q8TC20	777 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	SCFD1	Q8WVM8	642 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	IDI2	Q9BXS1	227 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	NUCKS1	Q9H1E3	243 aa	Known RBP	18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	RNF216	Q9NWF9	866 aa	Predicted RBP	18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	PI4KB	Q9UBF8	816 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	FAM198A	Q9UFP1	575 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	PITPNM2	Q9BZ72	1349 aa		18.72	■□□□□ 0.59
TOM1-210	ENST00000449058	NPHP3-ACAD11	A0A0J9YXS1	232 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	N4BP1	O75113	896 aa	Known RBP	18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	MED24	O75448	989 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	MOCS3	O95396	460 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	MAGEA1	P43355	309 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	SPIRE1	Q08AE8	756 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	MAP9	Q49MG5	647 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	TATDN1	Q6P1N9	297 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	SH3BP5L	Q7L8J4	393 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	ETNPPL	Q8TBG4	499 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	P2RX7	Q99572	595 aa	Known RBP	18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	KCNQ5	Q9NR82	932 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	TBC1D7	Q9P0N9	293 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	EP400	Q96L91	3159 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	PDE6B	P35913	854 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	CACNB3	P54284	484 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	SLC12A3	P55017	1021 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	FKBP1A	P62942	108 aa	Known RBP	18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	ARSH	Q5FYA8	562 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	HERC4	Q5GLZ8	1057 aa	Predicted RBP	18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	MCTP2	Q6DN12	878 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	PCDHAC2	Q9Y5I4	1007 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	SCN9A	Q15858	1988 aa		18.71	■□□□□ 0.59
TOM1-210	ENST00000449058	STAT3	P40763	770 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	ARHGAP4	P98171	946 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	HDLBP	Q00341	1268 aa	Known RBP	18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	TCP10	Q12799	353 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	MMGT1	Q8N4V1	131 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	MASTL	Q96GX5	879 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	UIMC1	Q96RL1	719 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	ACBD3	Q9H3P7	528 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	DBNDD1	Q9H9R9	158 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	EMILIN3	Q9NT22	766 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	TBX3	O15119	743 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	TLR2	O60603	784 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	NPM3	O75607	178 aa	Known RBP	18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	PDE4C	Q08493	712 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	FAM83B	Q5T0W9	1011 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	NELFCD	Q8IXH7	590 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	FAM71B	Q8TC56	605 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	ALS2CR12	Q96Q35	445 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	VPS18	Q9P253	973 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	SALL4	Q9UJQ4	1053 aa		18.7	■□□□□ 0.58
TOM1-210	ENST00000449058	HMGB2	P26583	209 aa	Known RBP	18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	AARS	P49588	968 aa	Known RBP eCLIP	18.69	■□□□□ 0.58	1e-6	■■■■■ 36.1
TOM1-210	ENST00000449058	CACNB1	Q02641	598 aa	Predicted RBP	18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	GFPT1	Q06210	699 aa	Predicted RBP	18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	C2orf54	Q08AI8	447 aa		18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	EDRF1	Q3B7T1	1238 aa		18.69	■□□□□ 0.58
TOM1-210	ENST00000449058		Q4G0T1	1027 aa		18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	HAUS3	Q68CZ6	603 aa		18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	PPP4R3CP	Q6ZMV5	832 aa		18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	GMCL1P1	Q8NEA9	526 aa		18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	COG1	Q8WTW3	980 aa		18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	MED4	Q9NPJ6	270 aa		18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	CALCOCO1	Q9P1Z2	691 aa		18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	FAM184B	Q9ULE4	1060 aa		18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	RAD21	O60216	631 aa		18.69	■□□□□ 0.58
TOM1-210	ENST00000449058	SERPING1	P05155	500 aa		18.69	■□□□□ 0.58

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