RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 NR3C2P08235 984 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 ZNF280AP59817 542 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 HEATR6Q6AI08 1181 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 TTC12Q9H892 705 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 THEGQ9P2T0 379 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 FRMD3A2A2Y4 597 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 RPL13P26373 211 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 PHKA2P46019 1235 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 JAK3P52333 1124 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 CCDC70Q6NSX1 233 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 PKNOX2Q96KN3 472 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 RIPOR3Q96MK2 946 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 USP26Q9BXU7 913 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 NT5C3AQ9H0P0 336 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 ABCG4Q9H172 646 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 CHD2O14647 1828 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 KCPQ6ZWJ8 1503 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 FMN2Q9NZ56 1722 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 SYCE3A1L190 88 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 C17orf102A2RUQ5 167 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 SLC10A3P09131 477 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 SNX16P57768 344 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 FKBP15Q5T1M5 1219 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 C15orf52Q6ZUT6 534 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 TICAM2Q86XR7 235 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 PLEKHM2Q8IWE5 1019 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 MTMR14Q8NCE2 650 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 U2AF1L4Q8WU68 220 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 SEPT1Q8WYJ6 367 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 OSBP2Q969R2 916 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 TRIM5Q9C035 493 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 PPP1R9AQ9ULJ8 1098 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 PTCH2Q9Y6C5 1203 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 ATP8B3O60423 1300 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 HMGB1P1B2RPK0 211 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 EFCAB14O75071 495 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 GCFC2P16383 781 aaKnown RBP6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 ST8SIA6P61647 398 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 AP3B2Q13367 1082 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 WDR44Q5JSH3 913 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 CNNM3Q8NE01 707 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 MIR1-1HGQ9H1L0 117 aa6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-209ENST00000448940 RIC1Q4ADV7 1423 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 DDTLA6NHG4 134 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 WDR64B1ANS9 1081 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 PLCD1P51178 756 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 ZNF174Q15697 407 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 NEK8Q86SG6 692 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 BLIDQ8IZY5 108 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 ACER1Q8TDN7 264 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 SPACA7Q96KW9 195 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 DEF6Q9H4E7 631 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 MTMR4Q9NYA4 1195 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 DACT1Q9NYF0 836 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 PCDHB13Q9Y5F0 798 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 RPTORQ8N122 1335 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 KIAA1210Q9ULL0 1709 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 COL16A1Q07092 1604 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 DMP1Q13316 513 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 RILPL1Q5EBL4 403 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 SMC5Q8IY18 1101 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 JAKMIP2Q96AA8 810 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 TSEN34Q9BSV6 310 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 SCAND2PQ9GZW5 306 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 EHD4Q9H223 541 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 CLSTN2Q9H4D0 955 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 ALDH1A2O94788 518 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 DSG3P32926 999 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 PTGISQ16647 500 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 SV2BQ7L1I2 683 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 PSPC1Q8WXF1 523 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 GPKOWQ92917 476 aaPredicted RBP eCLIP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 TINF2Q9BSI4 451 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 GTPBP4Q9BZE4 634 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 SH3BP5O60239 455 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 NEMFO60524 1076 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 DNA2P51530 1060 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 QRICH1Q2TAL8 776 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 GPR142Q7Z601 462 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 RASAL3Q86YV0 1011 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 DIS3L2Q8IYB7 885 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 DDX25Q9UHL0 483 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 CPSF3Q9UKF6 684 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 MACROD2A1Z1Q3 448 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 MRPS5P82675 430 aaKnown RBP6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 ACCSLQ4AC99 568 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 KLHL10Q6JEL2 608 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 MYCT1Q8N699 235 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 ZNF302Q9NR11 478 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 SLC12A6Q9UHW9 1150 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 SLIT3O75094 1523 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 MAGEB2O15479 319 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 TNNC2P02585 160 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 STAT5BP51692 787 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 IRX4P78413 519 aa6.22□□□□□ -1.41
CDC42BPA-209ENST00000448940 PREPLQ4J6C6 727 aaPredicted RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms