RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 AP3B2Q13367 1082 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 MTMR1Q13613 665 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 PTGISQ16647 500 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 GDF6Q6KF10 455 aaPredicted RBP14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 C7orf31Q8N865 590 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 GIMAP8Q8ND71 665 aaPredicted RBP14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 CCDC12Q8WUD4 166 aaPredicted RBP14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 CDHR1Q96JP9 859 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 CTAGE1Q96RT6 745 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 GPR20Q99678 358 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.57□□□□□ -0.083e-14■□□□□ 11.2
PRPF40A-203ENST00000448428 KATNAL1Q9BW62 490 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 WNT8AQ9H1J5 351 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 TPCN1Q9ULQ1 816 aa14.57□□□□□ -0.08
PRPF40A-203ENST00000448428 SCN5AQ14524 2016 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 H3BRB1 525 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 CPLX1O14810 134 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 LGALS2P05162 132 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 SREBF1P36956 1147 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 AK2P54819 239 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 SP4Q02446 784 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 TMEM240Q5SV17 173 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 TRIM22Q8IYM9 498 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 RNPC3Q96LT9 517 aaKnown RBP14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 TUT1Q9H6E5 874 aaKnown RBP14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 IL23AQ9NPF7 189 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 KCNH7Q9NS40 1196 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 PKD2L1Q9P0L9 805 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 VPS54Q9P1Q0 977 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 GTF2IRD1Q9UHL9 959 aa14.56□□□□□ -0.08
PRPF40A-203ENST00000448428 MEIS1O00470 390 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 PFKFB2O60825 505 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 ARP10275 920 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 GNA11P29992 359 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 ARHGAP4P98171 946 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 SCRN1Q12765 414 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 HIC1Q14526 733 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 CEP55Q53EZ4 464 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 ZNF365Q70YC5 407 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 REXO1Q8N1G1 1221 aaKnown RBP14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 CRYGNQ8WXF5 182 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 SCLYQ96I15 445 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 SLKQ9H2G2 1235 aaPredicted RBP14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 SH3GLB2Q9NR46 395 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 NOD1Q9Y239 953 aa14.55□□□□□ -0.08
PRPF40A-203ENST00000448428 KAT6AQ92794 2004 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 GSTTP1A0A1W2PQM5 241 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 DEXIO95424 95 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 CYP3A4P08684 503 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 ZNF76P36508 570 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 NEK4P51957 841 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 ZNF200P98182 395 aaPredicted RBP14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 ANKRD1Q15327 319 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 C8orf34Q49A92 452 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 UTP14CQ5TAP6 766 aaKnown RBP14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 MCTP2Q6DN12 878 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 GPR153Q6NV75 609 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 CPLX2Q6PUV4 134 aaKnown RBP14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 CCDC148Q8NFR7 591 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 RASGRP4Q8TDF6 673 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 VWCEQ96DN2 955 aa14.54□□□□□ -0.08
PRPF40A-203ENST00000448428 FAM86B1E9PN63 330 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 DTNBO60941 627 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 FGBP02675 491 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 FAM86B2P0C5J1 330 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 IQCF3P0C7M6 154 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 TCF7P36402 384 aaPredicted RBP14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 NLRP5P59047 1200 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 BFSP2Q13515 415 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 RASIP1Q5U651 963 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 TRIM50Q86XT4 487 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 RPUSD2Q8IZ73 545 aaKnown RBP14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 RETREG2Q8NC44 543 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 BICD2Q8TD16 824 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 SEPT1Q8WYJ6 367 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 DHX38Q92620 1227 aaKnown RBP14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 AIFM3Q96NN9 605 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 RNPEPQ9H4A4 650 aa14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 AGO4Q9HCK5 861 aaKnown RBP14.53□□□□□ -0.08
PRPF40A-203ENST00000448428 EDIL3O43854 480 aa14.52□□□□□ -0.09
PRPF40A-203ENST00000448428 CTDNEP1O95476 244 aa14.52□□□□□ -0.09
PRPF40A-203ENST00000448428 SMIM10L2AP0DMW4 78 aa14.52□□□□□ -0.09
PRPF40A-203ENST00000448428 SMIM10L2BP0DMW5 78 aa14.52□□□□□ -0.09
PRPF40A-203ENST00000448428 ME3Q16798 604 aa14.52□□□□□ -0.09
PRPF40A-203ENST00000448428 PSRC1Q6PGN9 363 aaPredicted RBP14.52□□□□□ -0.09
PRPF40A-203ENST00000448428 NIPA1Q7RTP0 329 aa14.52□□□□□ -0.09
PRPF40A-203ENST00000448428 PLA2G4DQ86XP0 818 aa14.52□□□□□ -0.09
PRPF40A-203ENST00000448428 NECAB1Q8N987 351 aa14.52□□□□□ -0.09
PRPF40A-203ENST00000448428 HERVK_113Q902F9 699 aa14.52□□□□□ -0.09
PRPF40A-203ENST00000448428 SLC9A2Q9UBY0 812 aa14.52□□□□□ -0.09
PRPF40A-203ENST00000448428 TANC1Q9C0D5 1861 aa14.52□□□□□ -0.09
PRPF40A-203ENST00000448428 TET1Q8NFU7 2136 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 NFASCO94856 1347 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 IGLV3-22A0A075B6J6 115 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 CDKL5O76039 1030 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 HOXC8P31273 242 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 SMAD3P84022 425 aaKnown RBP14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 PTK7Q13308 1070 aa14.51□□□□□ -0.09
PRPF40A-203ENST00000448428 ITGB3BPQ13352 177 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms