RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 TROAPQ12815 778 aa11.97□□□□□ -0.49
VSTM1-206ENST00000447872 SLC35G1Q2M3R5 365 aa11.97□□□□□ -0.49
VSTM1-206ENST00000447872 TRIM71Q2Q1W2 868 aaKnown RBP11.97□□□□□ -0.49
VSTM1-206ENST00000447872 GNPTABQ3T906 1256 aa11.97□□□□□ -0.49
VSTM1-206ENST00000447872 ZNF618Q5T7W0 954 aa11.97□□□□□ -0.49
VSTM1-206ENST00000447872 KRT40Q6A162 431 aa11.97□□□□□ -0.49
VSTM1-206ENST00000447872 TMCO2Q7Z6W1 182 aaPredicted RBP11.97□□□□□ -0.49
VSTM1-206ENST00000447872 PIBF1Q8WXW3 757 aa11.97□□□□□ -0.49
VSTM1-206ENST00000447872 ZFP91Q96JP5 570 aaPredicted RBP11.97□□□□□ -0.49
VSTM1-206ENST00000447872 C16orf70Q9BSU1 422 aa11.97□□□□□ -0.49
VSTM1-206ENST00000447872 TUT1Q9H6E5 874 aaKnown RBP11.97□□□□□ -0.49
VSTM1-206ENST00000447872 SENP2Q9HC62 589 aa11.97□□□□□ -0.49
VSTM1-206ENST00000447872 COG5Q9UP83 839 aa11.97□□□□□ -0.49
VSTM1-206ENST00000447872 LCTP09848 1927 aa11.97□□□□□ -0.49
VSTM1-206ENST00000447872 C17orf102A2RUQ5 167 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 LCHNA4D1U4 455 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 RSPH10B2B2RC85 870 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 NOP56O00567 594 aaKnown RBP11.96□□□□□ -0.49
VSTM1-206ENST00000447872 CYTH3O43739 400 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 LGR5O75473 907 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 GJB5O95377 273 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 RSPH10BP0C881 870 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 GRB10Q13322 594 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 NEDD9Q14511 834 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 TMEM31Q5JXX7 168 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 SERINC5Q86VE9 423 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 IGDCC4Q8TDY8 1250 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 ATP6V0A1Q93050 837 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 WNT8BQ93098 351 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 HLA-CQ95604 372 aa11.96□□□□□ -0.49
VSTM1-206ENST00000447872 SCN10AQ9Y5Y9 1956 aa11.96□□□□□ -0.5
VSTM1-206ENST00000447872 CHD7Q9P2D1 2997 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 SPATA31C2B4DYI2 1134 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 SGSM2O43147 1006 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 GNAT1P11488 350 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 PRKCSHP14314 528 aaPredicted RBP11.95□□□□□ -0.5
VSTM1-206ENST00000447872 KIF5BP33176 963 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 KCNQ1P51787 676 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 HIC1Q14526 733 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 MBTPS1Q14703 1052 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 TCTN1Q2MV58 587 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 FAM117BQ6P1L5 589 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 TRAF7Q6Q0C0 670 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 METTL7BQ6UX53 244 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 CTCFLQ8NI51 663 aaPredicted RBP11.95□□□□□ -0.5
VSTM1-206ENST00000447872 GPKOWQ92917 476 aaPredicted RBP eCLIP11.95□□□□□ -0.5
VSTM1-206ENST00000447872 CUL5Q93034 780 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 RRP36Q96EU6 259 aaKnown RBP11.95□□□□□ -0.5
VSTM1-206ENST00000447872 NECAB3Q96P71 396 aaPredicted RBP11.95□□□□□ -0.5
VSTM1-206ENST00000447872 INPP4AQ96PE3 977 aaPredicted RBP11.95□□□□□ -0.5
VSTM1-206ENST00000447872 TGS1Q96RS0 853 aaKnown RBP11.95□□□□□ -0.5
VSTM1-206ENST00000447872 MAP3K14Q99558 947 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 LZTS2Q9BRK4 669 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 RTEL1Q9NZ71 1219 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 LMCD1Q9NZU5 365 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 MTUS1Q9ULD2 1270 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 INSL6Q9Y581 213 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 TAF6LQ9Y6J9 622 aa11.95□□□□□ -0.5
VSTM1-206ENST00000447872 FIBPO43427 364 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 LPXNO60711 386 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 AMHP03971 560 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 LGALS2P05162 132 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 HSP90AA1P07900 732 aaKnown RBP11.94□□□□□ -0.5
VSTM1-206ENST00000447872 SMIM10L2AP0DMW4 78 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 SMIM10L2BP0DMW5 78 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 ICAM3P32942 547 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 GNAQP50148 359 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 ERVK-21P61565 698 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 MRPS9P82933 396 aaKnown RBP11.94□□□□□ -0.5
VSTM1-206ENST00000447872 XRRA1Q6P2D8 792 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 CYFIP1Q7L576 1253 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 SPRED2Q7Z698 418 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 TMTC2Q8N394 836 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 DBF4BQ8NFT6 615 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 SMARCC2Q8TAQ2 1214 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 MAP4K1Q92918 833 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 SPZ1Q9BXG8 430 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 RNPEPQ9H4A4 650 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 BCAS3Q9H6U6 928 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 SUGCTQ9HAC7 445 aa11.94□□□□□ -0.5
VSTM1-206ENST00000447872 SEC63Q9UGP8 760 aaKnown RBP11.94□□□□□ -0.5
VSTM1-206ENST00000447872 LINC01553A4QN01 128 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 DDX11L8A8MPP1 907 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 TREHO43280 583 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 EPB41L2O43491 1005 aaKnown RBP11.93□□□□□ -0.5
VSTM1-206ENST00000447872 CAND2O75155 1236 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 DDAH1O94760 285 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 SMARCA1P28370 1054 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 HOXC8P31273 242 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 ANTXR2P58335 489 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 FOXK2Q01167 660 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 PLEKHG4Q58EX7 1191 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 PCNX4Q63HM2 1172 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 USP17L6PQ6QN14 398 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.93□□□□□ -0.5
VSTM1-206ENST00000447872 NFXL1Q6ZNB6 911 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 MB21D2Q8IYB1 491 aaPredicted RBP11.93□□□□□ -0.5
VSTM1-206ENST00000447872 ZNF654Q8IZM8 581 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 MYOCDQ8IZQ8 938 aa11.93□□□□□ -0.5
VSTM1-206ENST00000447872 GDPD5Q8WTR4 605 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms