RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 COA7Q96BR5 231 aa21.04■□□□□ 0.96
SDCBP-204ENST00000447182 PALMO75781 387 aa21.03■□□□□ 0.96
SDCBP-204ENST00000447182 SNHG28P0DPA3 235 aa21.03■□□□□ 0.96
SDCBP-204ENST00000447182 ECM1Q16610 540 aa21.03■□□□□ 0.96
SDCBP-204ENST00000447182 MEI1Q5TIA1 1274 aa21.03■□□□□ 0.96
SDCBP-204ENST00000447182 CD302Q8IX05 232 aa21.03■□□□□ 0.96
SDCBP-204ENST00000447182 FAM163AQ96GL9 167 aaPredicted RBP21.03■□□□□ 0.96
SDCBP-204ENST00000447182 PANK4Q9NVE7 773 aa21.03■□□□□ 0.96
SDCBP-204ENST00000447182 AIPL1Q9NZN9 384 aa21.03■□□□□ 0.96
SDCBP-204ENST00000447182 RHBDL3P58872 404 aa21.02■□□□□ 0.96
SDCBP-204ENST00000447182 GPIHBP1Q8IV16 184 aa21.02■□□□□ 0.96
SDCBP-204ENST00000447182 C1orf131Q8NDD1 294 aaKnown RBP21.02■□□□□ 0.96
SDCBP-204ENST00000447182 LSM14BQ9BX40 385 aaKnown RBP21.02■□□□□ 0.96
SDCBP-204ENST00000447182 HEXIM1O94992 359 aaKnown RBP21.02■□□□□ 0.96
SDCBP-204ENST00000447182 ERCC3P19447 782 aa21.02■□□□□ 0.96
SDCBP-204ENST00000447182 CARSP49589 748 aaKnown RBP21.02■□□□□ 0.96
SDCBP-204ENST00000447182 CLK2P49760 499 aaKnown RBP21.02■□□□□ 0.96
SDCBP-204ENST00000447182 POLR2FP61218 127 aaKnown RBP21.02■□□□□ 0.96
SDCBP-204ENST00000447182 NFIXQ14938 502 aa21.02■□□□□ 0.96
SDCBP-204ENST00000447182 ZC3H3Q8IXZ2 948 aaKnown RBP21.02■□□□□ 0.96
SDCBP-204ENST00000447182 HAS1Q92839 578 aa21.02■□□□□ 0.96
SDCBP-204ENST00000447182 INPP4AQ96PE3 977 aaPredicted RBP21.02■□□□□ 0.96
SDCBP-204ENST00000447182 NT5C3AQ9H0P0 336 aa21.02■□□□□ 0.96
SDCBP-204ENST00000447182 EHD4Q9H223 541 aa21.02■□□□□ 0.96
SDCBP-204ENST00000447182 BMP2KQ9NSY1 1161 aaPredicted RBP21.02■□□□□ 0.96
SDCBP-204ENST00000447182 MTMR4Q9NYA4 1195 aa21.02■□□□□ 0.96
SDCBP-204ENST00000447182 BTNL10A8MVZ5 291 aa21.01■□□□□ 0.95
SDCBP-204ENST00000447182 CES2O00748 559 aa21.01■□□□□ 0.95
SDCBP-204ENST00000447182 KLRC1P26715 233 aa21.01■□□□□ 0.95
SDCBP-204ENST00000447182 EPB41L5Q9HCM4 733 aa21.01■□□□□ 0.95
SDCBP-204ENST00000447182 NFU1Q9UMS0 254 aa21.01■□□□□ 0.95
SDCBP-204ENST00000447182 PCDHA2Q9Y5H9 948 aa21.01■□□□□ 0.95
SDCBP-204ENST00000447182 FAM169AQ9Y6X4 670 aa21.01■□□□□ 0.95
SDCBP-204ENST00000447182 FRMPD2Q68DX3 1309 aaPredicted RBP21.01■□□□□ 0.95
SDCBP-204ENST00000447182 KDM3AQ9Y4C1 1321 aa21.01■□□□□ 0.95
SDCBP-204ENST00000447182 CFAP58Q5T655 872 aa21.01■□□□□ 0.95
SDCBP-204ENST00000447182 TMC4Q7Z404 712 aa21.01■□□□□ 0.95
SDCBP-204ENST00000447182 WHAMMQ8TF30 809 aa21.01■□□□□ 0.95
SDCBP-204ENST00000447182 TBC1D5Q92609 795 aa21.01■□□□□ 0.95
SDCBP-204ENST00000447182 DDX25Q9UHL0 483 aaKnown RBP21.01■□□□□ 0.95
SDCBP-204ENST00000447182 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.01■□□□□ 0.95
SDCBP-204ENST00000447182 ATXN2Q99700 1313 aaKnown RBP21■□□□□ 0.95
SDCBP-204ENST00000447182 SLC26A4O43511 780 aa21■□□□□ 0.95
SDCBP-204ENST00000447182 ZEB2O60315 1214 aa21■□□□□ 0.95
SDCBP-204ENST00000447182 GCFC2P16383 781 aaKnown RBP21■□□□□ 0.95
SDCBP-204ENST00000447182 GUCY2DQ02846 1103 aa21■□□□□ 0.95
SDCBP-204ENST00000447182 CDC37Q16543 378 aaPredicted RBP21■□□□□ 0.95
SDCBP-204ENST00000447182 KDM7AQ6ZMT4 941 aa21■□□□□ 0.95
SDCBP-204ENST00000447182 EIF1ADQ8N9N8 165 aaKnown RBP21■□□□□ 0.95
SDCBP-204ENST00000447182 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21■□□□□ 0.954e-7■□□□□ 10.7
SDCBP-204ENST00000447182 CCDC43Q96MW1 224 aaKnown RBP21■□□□□ 0.95
SDCBP-204ENST00000447182 CD209Q9NNX6 404 aa21■□□□□ 0.95
SDCBP-204ENST00000447182 FOCADQ5VW36 1801 aa21■□□□□ 0.95
SDCBP-204ENST00000447182 PNMA6FA0A0J9YX94 578 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 ZNF233A6NK53 670 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 FAM153BP0C7A2 387 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 IL1R1P14778 569 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 TNNI2P48788 182 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 SKIDA1Q1XH10 827 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 FAM153CQ494X1 144 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 SLC51AQ86UW1 340 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 SLF2Q8IX21 1173 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 CCDC65Q8IXS2 484 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 FAM153AQ9UHL3 310 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 TMEM59LQ9UK28 342 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 GAKO14976 1311 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 A0A087X0T9 212 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 FTCDO95954 541 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 KRT14P02533 472 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 FAM228BP0C875 321 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 KIAA0753Q2KHM9 967 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 C10orf76Q5T2E6 689 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 PIK3R5Q8WYR1 880 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 GANQ9H2C0 597 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 KCTD10Q9H3F6 313 aa20.99■□□□□ 0.95
SDCBP-204ENST00000447182 MYH7BA7E2Y1 1941 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 IGKV6D-41A0A0C4DH26 115 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 GNPATO15228 680 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 MYBP10242 640 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 PPP4R3CPQ6ZMV5 832 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 USP38Q8NB14 1042 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 PCDHA12Q9UN75 941 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 KLHL30Q0D2K2 578 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 RAPGEF1Q13905 1077 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 EDRF1Q3B7T1 1238 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 ICE2Q659A1 982 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 CASKIN2Q8WXE0 1202 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 KRT12Q99456 494 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 NAP1L4Q99733 375 aaKnown RBP20.98■□□□□ 0.95
SDCBP-204ENST00000447182 FGFBP2Q9BYJ0 223 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 JMJD4Q9H9V9 463 aa20.98■□□□□ 0.95
SDCBP-204ENST00000447182 C10orf71Q711Q0 1435 aa20.97■□□□□ 0.95
SDCBP-204ENST00000447182 ZSCAN5CA6NGD5 496 aaPredicted RBP20.97■□□□□ 0.95
SDCBP-204ENST00000447182 TNNC1P63316 161 aa20.97■□□□□ 0.95
SDCBP-204ENST00000447182 GABPAQ06546 454 aa20.97■□□□□ 0.95
SDCBP-204ENST00000447182 ASIC2Q16515 512 aa20.97■□□□□ 0.95
SDCBP-204ENST00000447182 B4GALNT4Q76KP1 1039 aa20.97■□□□□ 0.95
SDCBP-204ENST00000447182 SPATS2Q86XZ4 545 aaKnown RBP20.97■□□□□ 0.95
SDCBP-204ENST00000447182 SCFD1Q8WVM8 642 aa20.97■□□□□ 0.95
SDCBP-204ENST00000447182 IFT81Q8WYA0 676 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms