RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 CYFIP1Q7L576 1253 aa20.7■□□□□ 0.9
PHTF1-207ENST00000446739 AGO4Q9HCK5 861 aaKnown RBP20.7■□□□□ 0.9
PHTF1-207ENST00000446739 NFASCO94856 1347 aa20.7■□□□□ 0.9
PHTF1-207ENST00000446739 WDR81Q562E7 1941 aa20.7■□□□□ 0.9
PHTF1-207ENST00000446739 MYH9P35579 1960 aaKnown RBP20.69■□□□□ 0.9
PHTF1-207ENST00000446739 A0A1W2PQ45 241 aaPredicted RBP20.69■□□□□ 0.9
PHTF1-207ENST00000446739 A0A1W2PQY0 241 aa20.69■□□□□ 0.9
PHTF1-207ENST00000446739 H3BQV1 296 aa20.69■□□□□ 0.9
PHTF1-207ENST00000446739 GCFC2P16383 781 aaKnown RBP20.69■□□□□ 0.9
PHTF1-207ENST00000446739 PDCP20941 246 aa20.69■□□□□ 0.9
PHTF1-207ENST00000446739 Q4G0T1 1027 aa20.69■□□□□ 0.9
PHTF1-207ENST00000446739 PPP4R3AQ6IN85 833 aa20.69■□□□□ 0.9
PHTF1-207ENST00000446739 FERMT2Q96AC1 680 aa20.69■□□□□ 0.9
PHTF1-207ENST00000446739 GLT1D1Q96MS3 346 aa20.69■□□□□ 0.9
PHTF1-207ENST00000446739 MBOAT7Q96N66 472 aa20.69■□□□□ 0.9
PHTF1-207ENST00000446739 SDF4Q9BRK5 362 aa20.69■□□□□ 0.9
PHTF1-207ENST00000446739 HTATIP2Q9BUP3 242 aa20.69■□□□□ 0.9
PHTF1-207ENST00000446739 KAT6AQ92794 2004 aa20.69■□□□□ 0.9
PHTF1-207ENST00000446739 ELP1O95163 1332 aa20.69■□□□□ 0.9
PHTF1-207ENST00000446739 FAM205CA6NFA0 338 aa20.68■□□□□ 0.9
PHTF1-207ENST00000446739 NOP56O00567 594 aaKnown RBP20.68■□□□□ 0.9
PHTF1-207ENST00000446739 SORBS3O60504 671 aa20.68■□□□□ 0.9
PHTF1-207ENST00000446739 TDP2O95551 362 aa20.68■□□□□ 0.9
PHTF1-207ENST00000446739 PURAQ00577 322 aaKnown RBP20.68■□□□□ 0.9
PHTF1-207ENST00000446739 DGKDQ16760 1214 aa20.68■□□□□ 0.9
PHTF1-207ENST00000446739 HSDL1Q3SXM5 330 aa20.68■□□□□ 0.9
PHTF1-207ENST00000446739 CXCL17Q6UXB2 119 aa20.68■□□□□ 0.9
PHTF1-207ENST00000446739 LENG9Q96B70 501 aa20.68■□□□□ 0.9
PHTF1-207ENST00000446739 ZNF577Q9BSK1 485 aa20.68■□□□□ 0.9
PHTF1-207ENST00000446739 BCAS3Q9H6U6 928 aa20.68■□□□□ 0.9
PHTF1-207ENST00000446739 STARD7Q9NQZ5 370 aa20.68■□□□□ 0.9
PHTF1-207ENST00000446739 PKD2L1Q9P0L9 805 aa20.68■□□□□ 0.9
PHTF1-207ENST00000446739 IPO5O00410 1097 aaKnown RBP20.67■□□□□ 0.9
PHTF1-207ENST00000446739 PPFIA4O75335 1185 aa20.67■□□□□ 0.9
PHTF1-207ENST00000446739 HSP90AA1P07900 732 aaKnown RBP20.67■□□□□ 0.9
PHTF1-207ENST00000446739 MYL3P08590 195 aa20.67■□□□□ 0.9
PHTF1-207ENST00000446739 HOXD8P13378 290 aaPredicted RBP20.67■□□□□ 0.9
PHTF1-207ENST00000446739 U2AF2P26368 475 aaKnown RBP eCLIP20.67■□□□□ 0.9
PHTF1-207ENST00000446739 ITGB3BPQ13352 177 aaPredicted RBP20.67■□□□□ 0.9
PHTF1-207ENST00000446739 NOSTRINQ8IVI9 506 aa20.67■□□□□ 0.9
PHTF1-207ENST00000446739 JPH1Q9HDC5 661 aaPredicted RBP20.67■□□□□ 0.9
PHTF1-207ENST00000446739 DDX25Q9UHL0 483 aaKnown RBP20.67■□□□□ 0.9
PHTF1-207ENST00000446739 CEP290O15078 2479 aa20.66■□□□□ 0.9
PHTF1-207ENST00000446739 CCNT1O60563 726 aaKnown RBP20.66■□□□□ 0.9
PHTF1-207ENST00000446739 SLC39A5Q6ZMH5 540 aa20.66■□□□□ 0.9
PHTF1-207ENST00000446739 VTI1AQ96AJ9 217 aa20.66■□□□□ 0.9
PHTF1-207ENST00000446739 GPR20Q99678 358 aa20.66■□□□□ 0.9
PHTF1-207ENST00000446739 MTG1Q9BT17 334 aaPredicted RBP20.66■□□□□ 0.9
PHTF1-207ENST00000446739 TBC1D22BQ9NU19 505 aa20.66■□□□□ 0.9
PHTF1-207ENST00000446739 FOXD4L1Q9NU39 408 aa20.66■□□□□ 0.9
PHTF1-207ENST00000446739 SLC9A2Q9UBY0 812 aa20.66■□□□□ 0.9
PHTF1-207ENST00000446739 KIF28PB7ZC32 967 aa20.65■□□□□ 0.9
PHTF1-207ENST00000446739 MSH4O15457 936 aa20.65■□□□□ 0.9
PHTF1-207ENST00000446739 ATN1P54259 1190 aaPredicted RBP20.65■□□□□ 0.9
PHTF1-207ENST00000446739 SP4Q02446 784 aa20.65■□□□□ 0.9
PHTF1-207ENST00000446739 MLLT1Q03111 559 aaPredicted RBP20.65■□□□□ 0.9
PHTF1-207ENST00000446739 C1orf53Q5VUE5 145 aa20.65■□□□□ 0.9
PHTF1-207ENST00000446739 MCTP1Q6DN14 999 aa20.65■□□□□ 0.9
PHTF1-207ENST00000446739 SEPT1Q8WYJ6 367 aa20.65■□□□□ 0.9
PHTF1-207ENST00000446739 A0A0U1RQG5 324 aaPredicted RBP20.64■□□□□ 0.89
PHTF1-207ENST00000446739 DHX15O43143 795 aaKnown RBP20.64■□□□□ 0.89
PHTF1-207ENST00000446739 TRAPPC10P48553 1259 aa20.64■□□□□ 0.89
PHTF1-207ENST00000446739 SNX17Q15036 470 aa20.64■□□□□ 0.89
PHTF1-207ENST00000446739 SEZ6LQ9BYH1 1024 aa20.64■□□□□ 0.89
PHTF1-207ENST00000446739 TCEAL9Q9UHQ7 104 aa20.64■□□□□ 0.89
PHTF1-207ENST00000446739 NOL7Q9UMY1 257 aaKnown RBP20.64■□□□□ 0.89
PHTF1-207ENST00000446739 TNRC18O15417 2968 aaPredicted RBP20.64■□□□□ 0.89
PHTF1-207ENST00000446739 SLC37A4O43826 429 aa20.63■□□□□ 0.89
PHTF1-207ENST00000446739 BECN1Q14457 450 aa20.63■□□□□ 0.89
PHTF1-207ENST00000446739 LRRC26Q2I0M4 334 aa20.63■□□□□ 0.89
PHTF1-207ENST00000446739 ETNPPLQ8TBG4 499 aa20.63■□□□□ 0.89
PHTF1-207ENST00000446739 SLC5A5Q92911 643 aa20.63■□□□□ 0.89
PHTF1-207ENST00000446739 RIT2Q99578 217 aa20.63■□□□□ 0.89
PHTF1-207ENST00000446739 KATNAL1Q9BW62 490 aa20.63■□□□□ 0.89
PHTF1-207ENST00000446739 TRIP12Q14669 1992 aaPredicted RBP20.63■□□□□ 0.89
PHTF1-207ENST00000446739 ARVCFO00192 962 aa20.62■□□□□ 0.89
PHTF1-207ENST00000446739 TBX3O15119 743 aa20.62■□□□□ 0.89
PHTF1-207ENST00000446739 F2P00734 622 aa20.62■□□□□ 0.89
PHTF1-207ENST00000446739 SYT1P21579 422 aa20.62■□□□□ 0.89
PHTF1-207ENST00000446739 ACTR2P61160 394 aa20.62■□□□□ 0.89
PHTF1-207ENST00000446739 KRT76Q01546 638 aa20.62■□□□□ 0.89
PHTF1-207ENST00000446739 ORC2Q13416 577 aaPredicted RBP20.62■□□□□ 0.89
PHTF1-207ENST00000446739 ITGA7Q13683 1181 aa20.62■□□□□ 0.89
PHTF1-207ENST00000446739 ZNF746Q6NUN9 644 aaPredicted RBP20.62■□□□□ 0.89
PHTF1-207ENST00000446739 FAM20AQ96MK3 541 aa20.62■□□□□ 0.89
PHTF1-207ENST00000446739 TEKT3Q9BXF9 490 aa20.62■□□□□ 0.89
PHTF1-207ENST00000446739 KCNMB3Q9NPA1 279 aa20.62■□□□□ 0.89
PHTF1-207ENST00000446739 MROH7Q68CQ1 1323 aa20.61■□□□□ 0.89
PHTF1-207ENST00000446739 GSTTP1A0A1W2PQM5 241 aa20.61■□□□□ 0.89
PHTF1-207ENST00000446739 VPS37CA5D8V6 355 aaPredicted RBP20.61■□□□□ 0.89
PHTF1-207ENST00000446739 DDX39AO00148 427 aaKnown RBP20.61■□□□□ 0.89
PHTF1-207ENST00000446739 GAS7O60861 476 aa20.61■□□□□ 0.89
PHTF1-207ENST00000446739 LGALS2P05162 132 aa20.61■□□□□ 0.89
PHTF1-207ENST00000446739 ZNF286BP0CG31 522 aa20.61■□□□□ 0.89
PHTF1-207ENST00000446739 TCF7P36402 384 aaPredicted RBP20.61■□□□□ 0.89
PHTF1-207ENST00000446739 RTP1P59025 263 aa20.61■□□□□ 0.89
PHTF1-207ENST00000446739 LRCH2Q5VUJ6 765 aa20.61■□□□□ 0.89
PHTF1-207ENST00000446739 SLC43A3Q8NBI5 491 aa20.61■□□□□ 0.89
PHTF1-207ENST00000446739 DPF3Q92784 378 aa20.61■□□□□ 0.89
PHTF1-207ENST00000446739 KAT2BQ92831 832 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms