RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 C7orf61Q8IZ16 206 aa5.74□□□□□ -1.49
LINC01004-201ENST00000445184 LZTR1Q8N653 840 aa5.74□□□□□ -1.49
LINC01004-201ENST00000445184 TTLL6Q8N841 843 aa5.74□□□□□ -1.49
LINC01004-201ENST00000445184 IGDCC4Q8TDY8 1250 aa5.74□□□□□ -1.49
LINC01004-201ENST00000445184 CEP89Q96ST8 783 aa5.74□□□□□ -1.49
LINC01004-201ENST00000445184 PFDN2Q9UHV9 154 aa5.74□□□□□ -1.49
LINC01004-201ENST00000445184 A0A087X0B3 334 aa5.73□□□□□ -1.49
LINC01004-201ENST00000445184 PATE3B3GLJ2 98 aa5.73□□□□□ -1.49
LINC01004-201ENST00000445184 H0Y8X5 98 aa5.73□□□□□ -1.49
LINC01004-201ENST00000445184 ZNF623O75123 536 aa5.73□□□□□ -1.49
LINC01004-201ENST00000445184 ANAPC15P60006 121 aa5.73□□□□□ -1.49
LINC01004-201ENST00000445184 SLC7A5Q01650 507 aa5.73□□□□□ -1.49
LINC01004-201ENST00000445184 FOXB2Q5VYV0 432 aa5.73□□□□□ -1.49
LINC01004-201ENST00000445184 LRRC47Q8N1G4 583 aaKnown RBP5.73□□□□□ -1.49
LINC01004-201ENST00000445184 NINJ1Q92982 152 aa5.73□□□□□ -1.49
LINC01004-201ENST00000445184 ARHGEF4Q9NR80 690 aa5.73□□□□□ -1.49
LINC01004-201ENST00000445184 DDX56Q9NY93 547 aaKnown RBP5.73□□□□□ -1.49
LINC01004-201ENST00000445184 IQCA1LA6NCM1 817 aa5.72□□□□□ -1.49
LINC01004-201ENST00000445184 PPP2CBP62714 309 aa5.72□□□□□ -1.49
LINC01004-201ENST00000445184 PPP2CAP67775 309 aa5.72□□□□□ -1.49
LINC01004-201ENST00000445184 ABHD18Q0P651 414 aa5.72□□□□□ -1.49
LINC01004-201ENST00000445184 PRR31Q5SQ13 230 aa5.72□□□□□ -1.49
LINC01004-201ENST00000445184 KIAA1211LQ6NV74 962 aa5.72□□□□□ -1.49
LINC01004-201ENST00000445184 EXOC2Q96KP1 924 aa5.72□□□□□ -1.49
LINC01004-201ENST00000445184 WWC2-AS2Q96NR7 200 aa5.72□□□□□ -1.49
LINC01004-201ENST00000445184 FCRL3Q96P31 734 aaPredicted RBP5.72□□□□□ -1.49
LINC01004-201ENST00000445184 JADE2Q9NQC1 790 aa5.72□□□□□ -1.49
LINC01004-201ENST00000445184 KLHL42Q9P2K6 505 aa5.72□□□□□ -1.49
LINC01004-201ENST00000445184 SUCOQ9UBS9 1254 aaKnown RBP5.72□□□□□ -1.49
LINC01004-201ENST00000445184 PCDHB10Q9UN67 800 aa5.72□□□□□ -1.49
LINC01004-201ENST00000445184 CD2APQ9Y5K6 639 aa5.72□□□□□ -1.49
LINC01004-201ENST00000445184 A0A1W2PQU0 124 aa5.71□□□□□ -1.5
LINC01004-201ENST00000445184 FAM83GA6ND36 823 aa5.71□□□□□ -1.5
LINC01004-201ENST00000445184 CBFA2T2O43439 604 aa5.71□□□□□ -1.5
LINC01004-201ENST00000445184 ASMTLO95671 621 aa5.71□□□□□ -1.5
LINC01004-201ENST00000445184 STAT3P40763 770 aa5.71□□□□□ -1.5
LINC01004-201ENST00000445184 EPHB4P54760 987 aa5.71□□□□□ -1.5
LINC01004-201ENST00000445184 NANOS3P60323 173 aaKnown RBP5.71□□□□□ -1.5
LINC01004-201ENST00000445184 FOXE3Q13461 319 aa5.71□□□□□ -1.5
LINC01004-201ENST00000445184 FNDC3BQ53EP0 1204 aaKnown RBP5.71□□□□□ -1.5
LINC01004-201ENST00000445184 ANKRD39Q53RE8 183 aa5.71□□□□□ -1.5
LINC01004-201ENST00000445184 SMARCC1Q92922 1105 aaPredicted RBP5.71□□□□□ -1.5
LINC01004-201ENST00000445184 SYT3Q9BQG1 590 aa5.71□□□□□ -1.5
LINC01004-201ENST00000445184 KLHL25Q9H0H3 589 aa5.71□□□□□ -1.5
LINC01004-201ENST00000445184 NCOA5Q9HCD5 579 aaKnown RBP5.71□□□□□ -1.5
LINC01004-201ENST00000445184 RWDD3Q9Y3V2 267 aa5.71□□□□□ -1.5
LINC01004-201ENST00000445184 PLD2O14939 933 aa5.7□□□□□ -1.5
LINC01004-201ENST00000445184 MARCH6O60337 910 aa5.7□□□□□ -1.5
LINC01004-201ENST00000445184 DPTQ07507 201 aa5.7□□□□□ -1.5
LINC01004-201ENST00000445184 TRIM61Q5EBN2 209 aa5.7□□□□□ -1.5
LINC01004-201ENST00000445184 TAF7LQ5H9L4 462 aa5.7□□□□□ -1.5
LINC01004-201ENST00000445184 NOL9Q5SY16 702 aaKnown RBP5.7□□□□□ -1.5
LINC01004-201ENST00000445184 ETV3LQ6ZN32 361 aa5.7□□□□□ -1.5
LINC01004-201ENST00000445184 ARHGEF18Q6ZSZ5 1173 aa5.7□□□□□ -1.5
LINC01004-201ENST00000445184 CCDC144CPQ8IYA2 1237 aa5.7□□□□□ -1.5
LINC01004-201ENST00000445184 MFSD3Q96ES6 412 aa5.7□□□□□ -1.5
LINC01004-201ENST00000445184 DHRS1Q96LJ7 313 aa5.7□□□□□ -1.5
LINC01004-201ENST00000445184 IKZF4Q9H2S9 585 aa5.7□□□□□ -1.5
LINC01004-201ENST00000445184 GSG1L2A8MUP6 293 aa5.69□□□□□ -1.5
LINC01004-201ENST00000445184 SHOXO15266 292 aa5.69□□□□□ -1.5
LINC01004-201ENST00000445184 PPFIA2O75334 1257 aa5.69□□□□□ -1.5
LINC01004-201ENST00000445184 PARNO95453 639 aaKnown RBP5.69□□□□□ -1.5
LINC01004-201ENST00000445184 CYP1A1P04798 512 aaPredicted RBP5.69□□□□□ -1.5
LINC01004-201ENST00000445184 FGFR1P11362 822 aa5.69□□□□□ -1.5
LINC01004-201ENST00000445184 MIIPQ5JXC2 388 aa5.69□□□□□ -1.5
LINC01004-201ENST00000445184 RNF180Q86T96 592 aa5.69□□□□□ -1.5
LINC01004-201ENST00000445184 STK32CQ86UX6 486 aa5.69□□□□□ -1.5
LINC01004-201ENST00000445184 AMER2Q8N7J2 671 aa5.69□□□□□ -1.5
LINC01004-201ENST00000445184 MRPL4Q9BYD3 311 aaKnown RBP5.69□□□□□ -1.5
LINC01004-201ENST00000445184 FBLN5Q9UBX5 448 aa5.69□□□□□ -1.5
LINC01004-201ENST00000445184 ANKRD34BA5PLL1 514 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 C9IYK1 514 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 PDGFRBP09619 1106 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 IFNGR1P15260 489 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 POU4F1Q01851 419 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 PABPC4Q13310 644 aaKnown RBP eCLIP5.68□□□□□ -1.5
LINC01004-201ENST00000445184 AXDND1Q5T1B0 1012 aaPredicted RBP5.68□□□□□ -1.5
LINC01004-201ENST00000445184 PRAMEF18Q5VWM3 479 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 SLFN13Q68D06 897 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 WWC2Q6AWC2 1192 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 CD300LDQ6UXZ3 194 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 DNAJC10Q8IXB1 793 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 NIM1KQ8IY84 436 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 NAF1Q96HR8 494 aaKnown RBP5.68□□□□□ -1.5
LINC01004-201ENST00000445184 MRGPRX3Q96LB0 322 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 HAUS7Q99871 368 aa5.68□□□□□ -1.5
LINC01004-201ENST00000445184 FAM126AQ9BYI3 521 aaPredicted RBP5.68□□□□□ -1.5
LINC01004-201ENST00000445184 SF3B6Q9Y3B4 125 aaKnown RBP5.68□□□□□ -1.5
LINC01004-201ENST00000445184 MRPS23Q9Y3D9 190 aaKnown RBP5.68□□□□□ -1.5
LINC01004-201ENST00000445184 EPHX1P07099 455 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 CD3EP07766 207 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 C6orf222P0C671 652 aaPredicted RBP5.67□□□□□ -1.5
LINC01004-201ENST00000445184 POU3F2P20265 443 aaPredicted RBP5.67□□□□□ -1.5
LINC01004-201ENST00000445184 ITGA1P56199 1179 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 ZNF445P59923 1031 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 GNPTABQ3T906 1256 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 ZC3H18Q86VM9 953 aaKnown RBP5.67□□□□□ -1.5
LINC01004-201ENST00000445184 AFAP1L2Q8N4X5 818 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 Q8TCH9 128 aa5.67□□□□□ -1.5
LINC01004-201ENST00000445184 USP33Q8TEY7 942 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms