RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 ITGB5P18084 799 aa27.31■■□□□ 1.96
C9orf3-207ENST00000445181 ARHGAP4P98171 946 aa27.31■■□□□ 1.96
C9orf3-207ENST00000445181 PURAQ00577 322 aaKnown RBP27.31■■□□□ 1.96
C9orf3-207ENST00000445181 SEMA3FQ13275 785 aa27.31■■□□□ 1.96
C9orf3-207ENST00000445181 MYSM1Q5VVJ2 828 aa27.31■■□□□ 1.96
C9orf3-207ENST00000445181 PPTC7Q8NI37 304 aa27.31■■□□□ 1.96
C9orf3-207ENST00000445181 MTG1Q9BT17 334 aaPredicted RBP27.31■■□□□ 1.96
C9orf3-207ENST00000445181 SEZ6LQ9BYH1 1024 aa27.31■■□□□ 1.96
C9orf3-207ENST00000445181 JADE2Q9NQC1 790 aa27.31■■□□□ 1.96
C9orf3-207ENST00000445181 KCNJ14Q9UNX9 436 aa27.31■■□□□ 1.96
C9orf3-207ENST00000445181 MYH7BA7E2Y1 1941 aa27.3■■□□□ 1.96
C9orf3-207ENST00000445181 JAK2O60674 1132 aa27.3■■□□□ 1.96
C9orf3-207ENST00000445181 DGKDQ16760 1214 aa27.3■■□□□ 1.96
C9orf3-207ENST00000445181 GALNT17Q6IS24 598 aa27.3■■□□□ 1.96
C9orf3-207ENST00000445181 MFSD5Q6N075 450 aa27.3■■□□□ 1.96
C9orf3-207ENST00000445181 CYFIP1Q7L576 1253 aa27.3■■□□□ 1.96
C9orf3-207ENST00000445181 BLIDQ8IZY5 108 aa27.3■■□□□ 1.96
C9orf3-207ENST00000445181 MXRA8Q9BRK3 442 aa27.3■■□□□ 1.96
C9orf3-207ENST00000445181 LAMA3Q16787 3333 aa27.3■■□□□ 1.96
C9orf3-207ENST00000445181 FDPSP14324 419 aaKnown RBP27.29■■□□□ 1.96
C9orf3-207ENST00000445181 ST3GAL1Q11201 340 aa27.29■■□□□ 1.96
C9orf3-207ENST00000445181 CEP55Q53EZ4 464 aa27.29■■□□□ 1.96
C9orf3-207ENST00000445181 GIMAP8Q8ND71 665 aaPredicted RBP27.29■■□□□ 1.96
C9orf3-207ENST00000445181 PPP1R12CQ9BZL4 782 aa27.29■■□□□ 1.96
C9orf3-207ENST00000445181 PKD2L1Q9P0L9 805 aa27.29■■□□□ 1.96
C9orf3-207ENST00000445181 NOP56O00567 594 aaKnown RBP27.28■■□□□ 1.96
C9orf3-207ENST00000445181 MAFGO15525 162 aa27.28■■□□□ 1.96
C9orf3-207ENST00000445181 CHMP4BP1P59074 171 aa27.28■■□□□ 1.96
C9orf3-207ENST00000445181 SENP7Q9BQF6 1050 aa27.28■■□□□ 1.96
C9orf3-207ENST00000445181 PHF20Q9BVI0 1012 aa27.28■■□□□ 1.96
C9orf3-207ENST00000445181 TRPV6Q9H1D0 765 aa27.28■■□□□ 1.96
C9orf3-207ENST00000445181 HSDL1Q3SXM5 330 aa27.27■■□□□ 1.96
C9orf3-207ENST00000445181 METTL7BQ6UX53 244 aa27.27■■□□□ 1.96
C9orf3-207ENST00000445181 DAGLBQ8NCG7 672 aa27.27■■□□□ 1.96
C9orf3-207ENST00000445181 CYP2W1Q8TAV3 490 aa27.27■■□□□ 1.96
C9orf3-207ENST00000445181 RNPC3Q96LT9 517 aaKnown RBP27.27■■□□□ 1.96
C9orf3-207ENST00000445181 LLPHQ9BRT6 129 aaKnown RBP27.27■■□□□ 1.96
C9orf3-207ENST00000445181 BCAS3Q9H6U6 928 aa27.27■■□□□ 1.96
C9orf3-207ENST00000445181 GJB4Q9NTQ9 266 aa27.27■■□□□ 1.96
C9orf3-207ENST00000445181 B4GALT4O60513 344 aa27.26■■□□□ 1.95
C9orf3-207ENST00000445181 SP4Q02446 784 aa27.26■■□□□ 1.95
C9orf3-207ENST00000445181 PPIGQ13427 754 aaKnown RBP eCLIP27.26■■□□□ 1.952e-8■□□□□ 10.5
C9orf3-207ENST00000445181 TRIM29Q14134 588 aa27.26■■□□□ 1.95
C9orf3-207ENST00000445181 TMEM199Q8N511 208 aa27.26■■□□□ 1.95
C9orf3-207ENST00000445181 KCNH7Q9NS40 1196 aa27.26■■□□□ 1.95
C9orf3-207ENST00000445181 MTMR10Q9NXD2 777 aa27.26■■□□□ 1.95
C9orf3-207ENST00000445181 ATP9AO75110 1047 aa27.25■■□□□ 1.95
C9orf3-207ENST00000445181 CYP3A4P08684 503 aa27.25■■□□□ 1.95
C9orf3-207ENST00000445181 CYP2C18P33260 490 aa27.25■■□□□ 1.95
C9orf3-207ENST00000445181 FOSBP53539 338 aa27.25■■□□□ 1.95
C9orf3-207ENST00000445181 HIPK3Q9H422 1215 aa27.25■■□□□ 1.95
C9orf3-207ENST00000445181 BRMS1Q9HCU9 246 aa27.25■■□□□ 1.95
C9orf3-207ENST00000445181 MEIS1O00470 390 aa27.24■■□□□ 1.95
C9orf3-207ENST00000445181 PPFIA4O75335 1185 aa27.24■■□□□ 1.95
C9orf3-207ENST00000445181 ZNF286BP0CG31 522 aa27.24■■□□□ 1.95
C9orf3-207ENST00000445181 CSF2RAP15509 400 aa27.24■■□□□ 1.95
C9orf3-207ENST00000445181 KCNA2P16389 499 aa27.24■■□□□ 1.95
C9orf3-207ENST00000445181 MCM2P49736 904 aa27.24■■□□□ 1.95
C9orf3-207ENST00000445181 NPY5RQ15761 445 aa27.24■■□□□ 1.95
C9orf3-207ENST00000445181 FAM47CQ5HY64 1035 aa27.24■■□□□ 1.95
C9orf3-207ENST00000445181 FAM109BQ6ICB4 259 aaPredicted RBP27.24■■□□□ 1.95
C9orf3-207ENST00000445181 PLA2G4DQ86XP0 818 aa27.24■■□□□ 1.95
C9orf3-207ENST00000445181 CRYGNQ8WXF5 182 aa27.24■■□□□ 1.95
C9orf3-207ENST00000445181 FAM86B1E9PN63 330 aa27.23■■□□□ 1.95
C9orf3-207ENST00000445181 FAM86B2P0C5J1 330 aa27.23■■□□□ 1.95
C9orf3-207ENST00000445181 ARP10275 920 aa27.23■■□□□ 1.95
C9orf3-207ENST00000445181 NBPF20Q3BBV1 942 aa27.23■■□□□ 1.95
C9orf3-207ENST00000445181 NIPA1Q7RTP0 329 aa27.23■■□□□ 1.95
C9orf3-207ENST00000445181 KRT25Q7Z3Z0 450 aa27.23■■□□□ 1.95
C9orf3-207ENST00000445181 TBCKQ8TEA7 893 aa27.23■■□□□ 1.95
C9orf3-207ENST00000445181 SDF4Q9BRK5 362 aa27.23■■□□□ 1.95
C9orf3-207ENST00000445181 DOCK5Q9H7D0 1870 aa27.23■■□□□ 1.95
C9orf3-207ENST00000445181 CCDC194A0A1B0GVG4 234 aa27.22■■□□□ 1.95
C9orf3-207ENST00000445181 M0R2N6 131 aa27.22■■□□□ 1.95
C9orf3-207ENST00000445181 CD2BP2O95400 341 aaKnown RBP27.22■■□□□ 1.95
C9orf3-207ENST00000445181 HMGN5P82970 282 aaKnown RBP27.22■■□□□ 1.95
C9orf3-207ENST00000445181 SMAD3P84022 425 aaKnown RBP27.22■■□□□ 1.95
C9orf3-207ENST00000445181 NONOQ15233 471 aaKnown RBP eCLIP27.22■■□□□ 1.95
C9orf3-207ENST00000445181 C16orf59Q7L2K0 433 aa27.22■■□□□ 1.95
C9orf3-207ENST00000445181 FAM184AQ8NB25 1140 aa27.22■■□□□ 1.95
C9orf3-207ENST00000445181 GPR20Q99678 358 aa27.22■■□□□ 1.95
C9orf3-207ENST00000445181 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.22■■□□□ 1.957e-7■■■□□ 15.2
C9orf3-207ENST00000445181 KATNAL1Q9BW62 490 aa27.22■■□□□ 1.95
C9orf3-207ENST00000445181 AGO4Q9HCK5 861 aaKnown RBP27.22■■□□□ 1.95
C9orf3-207ENST00000445181 UMODL1Q5DID0 1318 aa27.21■■□□□ 1.95
C9orf3-207ENST00000445181 KRT2P35908 639 aa27.21■■□□□ 1.95
C9orf3-207ENST00000445181 USP11P51784 963 aa27.21■■□□□ 1.95
C9orf3-207ENST00000445181 SETQ01105 290 aaPredicted RBP27.21■■□□□ 1.95
C9orf3-207ENST00000445181 PRR16Q569H4 304 aa27.21■■□□□ 1.95
C9orf3-207ENST00000445181 PPP1R13LQ8WUF5 828 aa27.21■■□□□ 1.95
C9orf3-207ENST00000445181 TMX3Q96JJ7 454 aa27.21■■□□□ 1.95
C9orf3-207ENST00000445181 NOC4LQ9BVI4 516 aaKnown RBP27.21■■□□□ 1.95
C9orf3-207ENST00000445181 TRMT13Q9NUP7 481 aaKnown RBP27.21■■□□□ 1.95
C9orf3-207ENST00000445181 SUPT20HL2P0C7V6 817 aa27.2■■□□□ 1.94
C9orf3-207ENST00000445181 ACRP10323 421 aa27.2■■□□□ 1.94
C9orf3-207ENST00000445181 HOXD8P13378 290 aaPredicted RBP27.2■■□□□ 1.94
C9orf3-207ENST00000445181 TMEM240Q5SV17 173 aa27.2■■□□□ 1.94
C9orf3-207ENST00000445181 NFRKBQ6P4R8 1299 aa27.2■■□□□ 1.94
C9orf3-207ENST00000445181 OXER1Q8TDS5 423 aa27.2■■□□□ 1.94
C9orf3-207ENST00000445181 KAT2BQ92831 832 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms