RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 CHMP4BP1P59074 171 aa19.86■□□□□ 0.77
SMARCAL1-209ENST00000444508 SETQ01105 290 aaPredicted RBP19.86■□□□□ 0.77
SMARCAL1-209ENST00000444508 NONOQ15233 471 aaKnown RBP eCLIP19.86■□□□□ 0.77
SMARCAL1-209ENST00000444508 NPY5RQ15761 445 aa19.86■□□□□ 0.77
SMARCAL1-209ENST00000444508 KRT25Q7Z3Z0 450 aa19.86■□□□□ 0.77
SMARCAL1-209ENST00000444508 PLA2G4DQ86XP0 818 aa19.86■□□□□ 0.77
SMARCAL1-209ENST00000444508 SLC43A3Q8NBI5 491 aa19.86■□□□□ 0.77
SMARCAL1-209ENST00000444508 KATNAL1Q9BW62 490 aa19.86■□□□□ 0.77
SMARCAL1-209ENST00000444508 BCAS3Q9H6U6 928 aa19.86■□□□□ 0.77
SMARCAL1-209ENST00000444508 GJB4Q9NTQ9 266 aa19.86■□□□□ 0.77
SMARCAL1-209ENST00000444508 SCN10AQ9Y5Y9 1956 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 FAM86B1E9PN63 330 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 M0R2N6 131 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 FAM86B2P0C5J1 330 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 ARP10275 920 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 HOXD8P13378 290 aaPredicted RBP19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 KRT2P35908 639 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 USP11P51784 963 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 FOSBP53539 338 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 SP4Q02446 784 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 FAM184AQ8NB25 1140 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 TBCKQ8TEA7 893 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 TMX3Q96JJ7 454 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 SDF4Q9BRK5 362 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 PDLIM7Q9NR12 457 aa19.85■□□□□ 0.77
SMARCAL1-209ENST00000444508 GRIN2DO15399 1336 aa19.84■□□□□ 0.77
SMARCAL1-209ENST00000444508 CD2BP2O95400 341 aaKnown RBP19.84■□□□□ 0.77
SMARCAL1-209ENST00000444508 ZNF286BP0CG31 522 aa19.84■□□□□ 0.77
SMARCAL1-209ENST00000444508 CIITAP33076 1130 aa19.84■□□□□ 0.77
SMARCAL1-209ENST00000444508 NBPF20Q3BBV1 942 aa19.84■□□□□ 0.77
SMARCAL1-209ENST00000444508 FAM47CQ5HY64 1035 aa19.84■□□□□ 0.77
SMARCAL1-209ENST00000444508 GPR20Q99678 358 aa19.84■□□□□ 0.77
SMARCAL1-209ENST00000444508 AGO4Q9HCK5 861 aaKnown RBP19.84■□□□□ 0.77
SMARCAL1-209ENST00000444508 JPH1Q9HDC5 661 aaPredicted RBP19.84■□□□□ 0.77
SMARCAL1-209ENST00000444508 NFASCO94856 1347 aa19.83■□□□□ 0.77
SMARCAL1-209ENST00000444508 IGLV3-22A0A075B6J6 115 aa19.83■□□□□ 0.77
SMARCAL1-209ENST00000444508 F2P00734 622 aa19.83■□□□□ 0.77
SMARCAL1-209ENST00000444508 PRR16Q569H4 304 aa19.83■□□□□ 0.77
SMARCAL1-209ENST00000444508 NFRKBQ6P4R8 1299 aa19.83■□□□□ 0.77
SMARCAL1-209ENST00000444508 FAM126BQ8IXS8 530 aa19.83■□□□□ 0.77
SMARCAL1-209ENST00000444508 KAT2BQ92831 832 aa19.83■□□□□ 0.77
SMARCAL1-209ENST00000444508 C8orf76Q96K31 380 aa19.83■□□□□ 0.77
SMARCAL1-209ENST00000444508 TMEM39AQ9NV64 488 aa19.83■□□□□ 0.77
SMARCAL1-209ENST00000444508 MMP1P03956 469 aa19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 LGALS2P05162 132 aa19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 PSEN2P49810 448 aa19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 PTPN11Q06124 597 aaPredicted RBP19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 FAAP100Q0VG06 881 aa19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 MFSD10Q14728 455 aa19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 SAFBQ15424 915 aaKnown RBP eCLIP19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 INF2Q27J81 1249 aa19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 KRT40Q6A162 431 aa19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 OXER1Q8TDS5 423 aa19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 LBHD1Q9BQE6 289 aaPredicted RBP19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 ZNF577Q9BSK1 485 aa19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 SLC9A2Q9UBY0 812 aa19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 KIF3AQ9Y496 699 aa19.82■□□□□ 0.76
SMARCAL1-209ENST00000444508 TCF7P36402 384 aaPredicted RBP19.81■□□□□ 0.76
SMARCAL1-209ENST00000444508 ITGB3BPQ13352 177 aaPredicted RBP19.81■□□□□ 0.76
SMARCAL1-209ENST00000444508 KIAA0753Q2KHM9 967 aa19.81■□□□□ 0.76
SMARCAL1-209ENST00000444508 UTP14CQ5TAP6 766 aaKnown RBP19.81■□□□□ 0.76
SMARCAL1-209ENST00000444508 PIK3AP1Q6ZUJ8 805 aa19.81■□□□□ 0.76
SMARCAL1-209ENST00000444508 SH3RF1Q7Z6J0 888 aa19.81■□□□□ 0.76
SMARCAL1-209ENST00000444508 DIS3L2Q8IYB7 885 aaKnown RBP19.81■□□□□ 0.76
SMARCAL1-209ENST00000444508 C7orf31Q8N865 590 aa19.81■□□□□ 0.76
SMARCAL1-209ENST00000444508 SEPT1Q8WYJ6 367 aa19.81■□□□□ 0.76
SMARCAL1-209ENST00000444508 TBC1D22BQ9NU19 505 aa19.81■□□□□ 0.76
SMARCAL1-209ENST00000444508 TCEAL9Q9UHQ7 104 aa19.81■□□□□ 0.76
SMARCAL1-209ENST00000444508 ZNF215Q9UL58 517 aaPredicted RBP19.81■□□□□ 0.76
SMARCAL1-209ENST00000444508 TRIM43BA6NCK2 446 aa19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 H3BRB1 525 aa19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 IPO5O00410 1097 aaKnown RBP19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 KIAA0355O15063 1070 aa19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 CD4P01730 458 aa19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 SUPT20HL2P0C7V6 817 aa19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 NR5A1Q13285 461 aa19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 CHRDL2Q6WN34 429 aa19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 NEK8Q86SG6 692 aa19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 TRIM43Q96BQ3 446 aaPredicted RBP19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 NAP1L4Q99733 375 aaKnown RBP19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 C16orf70Q9BSU1 422 aa19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 TRPV6Q9H1D0 765 aa19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 TUT1Q9H6E5 874 aaKnown RBP19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 NOD1Q9Y239 953 aa19.8■□□□□ 0.76
SMARCAL1-209ENST00000444508 DDX39AO00148 427 aaKnown RBP19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 HAS3O00219 553 aa19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 B4GALT4O60513 344 aa19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 RAG1P15918 1043 aa19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 MAGEA10P43363 369 aaPredicted RBP19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 GUCY1B3Q02153 619 aa19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 LETM2Q2VYF4 491 aa19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 Q4G0T1 1027 aa19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 MOXD1Q6UVY6 613 aa19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 SESTD1Q86VW0 696 aa19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 PPP1R13LQ8WUF5 828 aa19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 LENG9Q96B70 501 aa19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 TRMT13Q9NUP7 481 aaKnown RBP19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 TBX21Q9UL17 535 aa19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 TELO2Q9Y4R8 837 aa19.79■□□□□ 0.76
SMARCAL1-209ENST00000444508 CYP3A7-CYP3A51PA0A087WV96 503 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms