RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 NEDD9Q14511 834 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 STK38Q15208 465 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 DUSP28Q4G0W2 176 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 SLC5A5Q92911 643 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 ARMC5Q96C12 935 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 TEKT3Q9BXF9 490 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 AP5M1Q9H0R1 490 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 BCAS3Q9H6U6 928 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 JPH1Q9HDC5 661 aaPredicted RBP15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 SYNRGQ9UMZ2 1314 aa15.33■□□□□ 0.04
TM9SF4-204ENST00000442842 NOP56O00567 594 aaKnown RBP15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 NKRFO15226 690 aaKnown RBP eCLIP15.32■□□□□ 0.045e-6■■■□□ 16.1
TM9SF4-204ENST00000442842 DYNC1LI2O43237 492 aaPredicted RBP15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 BMP15O95972 392 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 TGFB3P10600 412 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 KRT85P78386 507 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 ARHGAP1Q07960 439 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 CELF3Q5SZQ8 465 aaKnown RBP15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 NCAPH2Q6IBW4 605 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 METTL7BQ6UX53 244 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 SLFN12Q8IYM2 578 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 GIMAP8Q8ND71 665 aaPredicted RBP15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 HAS1Q92839 578 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 SPATA33Q96N06 139 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 DEFB118Q96PH6 123 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 XPNPEP3Q9NQH7 507 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 SLC9A2Q9UBY0 812 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 GNEQ9Y223 722 aaKnown RBP15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 TELO2Q9Y4R8 837 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 MCM3APO60318 1980 aa15.32■□□□□ 0.04
TM9SF4-204ENST00000442842 TBX3O15119 743 aa15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 DUSP11O75319 330 aaKnown RBP15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 FARP2O94887 1054 aaPredicted RBP15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 PGK1P00558 417 aa15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 ATP2C1P98194 919 aaPredicted RBP15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 TMEM266Q2M3C6 531 aa15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 TNPO1Q92973 898 aaKnown RBP15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 FAM20AQ96MK3 541 aa15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 MTMR9Q96QG7 549 aa15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 SENP7Q9BQF6 1050 aa15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 UNC45AQ9H3U1 944 aa15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 TBC1D22BQ9NU19 505 aa15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 POLR3EQ9NVU0 708 aa15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 CFAP45Q9UL16 551 aa15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 NFASCO94856 1347 aa15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 MYH15Q9Y2K3 1946 aa15.31■□□□□ 0.04
TM9SF4-204ENST00000442842 VWA3AA6NCI4 1184 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 MYADML2A6NDP7 307 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 LAD1O00515 517 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 MSCO60682 206 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 PSMD10O75832 226 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 ELP1O95163 1332 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 C6orf222P0C671 652 aaPredicted RBP15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 MARCKSP29966 332 aaPredicted RBP15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 TECP42680 631 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 NASPP49321 788 aaPredicted RBP15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 IRX5P78411 483 aaPredicted RBP15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 LAMC2Q13753 1193 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 PTPAQ15257 358 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 COL13A1Q5TAT6 717 aaPredicted RBP15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 DTHD1Q6ZMT9 781 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 C4orf32Q8N8J7 132 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 AFG1LQ8WV93 481 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 RIT2Q99578 217 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 TTC12Q9H892 705 aaPredicted RBP15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 SPC25Q9HBM1 224 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 PAK6Q9NQU5 681 aaPredicted RBP15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 VAV3Q9UKW4 847 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 SAMM50Q9Y512 469 aa15.3■□□□□ 0.04
TM9SF4-204ENST00000442842 POTEMA6NI47 508 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 DHX15O43143 795 aaKnown RBP15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 YEATS4O95619 227 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 CCNE2O96020 404 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 MMP3P08254 477 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 CPT1AP50416 773 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 ACTR2P61160 394 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 BEX3Q00994 111 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 KRT76Q01546 638 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 FSCN1Q16658 493 aaKnown RBP15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 HSDL1Q3SXM5 330 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 TPRNQ4KMQ1 711 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 LHX8Q68G74 356 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 ATL3Q6DD88 541 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 LINC00301Q8NCQ3 95 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 SPATA32Q96LK8 384 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 GDPD2Q9HCC8 539 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 PCDHA12Q9UN75 941 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 KIAA1217Q5T5P2 1943 aa15.29■□□□□ 0.04
TM9SF4-204ENST00000442842 WDR64B1ANS9 1081 aa15.28■□□□□ 0.04
TM9SF4-204ENST00000442842 SPTLC2O15270 562 aa15.28■□□□□ 0.04
TM9SF4-204ENST00000442842 ADAMTS4O75173 837 aa15.28■□□□□ 0.04
TM9SF4-204ENST00000442842 MYL3P08590 195 aa15.28■□□□□ 0.04
TM9SF4-204ENST00000442842 PRPHP41219 470 aa15.28■□□□□ 0.04
TM9SF4-204ENST00000442842 GJA9P57773 515 aa15.28■□□□□ 0.04
TM9SF4-204ENST00000442842 SLC39A14Q15043 492 aa15.28■□□□□ 0.04
TM9SF4-204ENST00000442842 UTP14CQ5TAP6 766 aaKnown RBP15.28■□□□□ 0.04
TM9SF4-204ENST00000442842 MIER3Q7Z3K6 550 aa15.28■□□□□ 0.04
TM9SF4-204ENST00000442842 PPTC7Q8NI37 304 aa15.28■□□□□ 0.04
TM9SF4-204ENST00000442842 EMID1Q96A84 441 aaPredicted RBP15.28■□□□□ 0.04
TM9SF4-204ENST00000442842 GPR20Q99678 358 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms