RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 GLT1D1Q96MS3 346 aa14.02□□□□□ -0.17
USP1-203ENST00000442679 AGO4Q9HCK5 861 aaKnown RBP14.02□□□□□ -0.17
USP1-203ENST00000442679 STARD7Q9NQZ5 370 aa14.02□□□□□ -0.17
USP1-203ENST00000442679 FRMPD3Q5JV73 1810 aa14.01□□□□□ -0.17
USP1-203ENST00000442679 ELP1O95163 1332 aa14.01□□□□□ -0.17
USP1-203ENST00000442679 IGLV3-22A0A075B6J6 115 aa14.01□□□□□ -0.17
USP1-203ENST00000442679 MMP3P08254 477 aa14.01□□□□□ -0.17
USP1-203ENST00000442679 PURAQ00577 322 aaKnown RBP14.01□□□□□ -0.17
USP1-203ENST00000442679 DGKDQ16760 1214 aa14.01□□□□□ -0.17
USP1-203ENST00000442679 LRRC26Q2I0M4 334 aa14.01□□□□□ -0.17
USP1-203ENST00000442679 HSDL1Q3SXM5 330 aa14.01□□□□□ -0.17
USP1-203ENST00000442679 EARS2Q5JPH6 523 aaKnown RBP14.01□□□□□ -0.17
USP1-203ENST00000442679 HSCBQ8IWL3 235 aa14.01□□□□□ -0.17
USP1-203ENST00000442679 MTG1Q9BT17 334 aaPredicted RBP14.01□□□□□ -0.17
USP1-203ENST00000442679 CYP3A7-CYP3A51PA0A087WV96 503 aa14□□□□□ -0.17
USP1-203ENST00000442679 FAM205CA6NFA0 338 aa14□□□□□ -0.17
USP1-203ENST00000442679 NOP56O00567 594 aaKnown RBP14□□□□□ -0.17
USP1-203ENST00000442679 PPFIA4O75335 1185 aa14□□□□□ -0.17
USP1-203ENST00000442679 CYP3A7P24462 503 aa14□□□□□ -0.17
USP1-203ENST00000442679 SETQ01105 290 aaPredicted RBP14□□□□□ -0.17
USP1-203ENST00000442679 SP4Q02446 784 aa14□□□□□ -0.17
USP1-203ENST00000442679 ITGB3BPQ13352 177 aaPredicted RBP14□□□□□ -0.17
USP1-203ENST00000442679 GNL2Q13823 731 aaKnown RBP14□□□□□ -0.17
USP1-203ENST00000442679 LETM2Q2VYF4 491 aa14□□□□□ -0.17
USP1-203ENST00000442679 NEK8Q86SG6 692 aa14□□□□□ -0.17
USP1-203ENST00000442679 UIMC1Q96RL1 719 aa14□□□□□ -0.17
USP1-203ENST00000442679 SDF4Q9BRK5 362 aa14□□□□□ -0.17
USP1-203ENST00000442679 ZNF577Q9BSK1 485 aa14□□□□□ -0.17
USP1-203ENST00000442679 MKI67P46013 3256 aaKnown RBP14□□□□□ -0.17
USP1-203ENST00000442679 KIAA1217Q5T5P2 1943 aa14□□□□□ -0.17
USP1-203ENST00000442679 NFASCO94856 1347 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 A0A0U1RQG5 324 aaPredicted RBP13.99□□□□□ -0.17
USP1-203ENST00000442679 H3BQV1 296 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 IPO5O00410 1097 aaKnown RBP13.99□□□□□ -0.17
USP1-203ENST00000442679 EVI5O60447 810 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 CCNT1O60563 726 aaKnown RBP13.99□□□□□ -0.17
USP1-203ENST00000442679 TDP2O95551 362 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 RTP1P59025 263 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 PSMC6P62333 389 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 Q4G0T1 1027 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 LARP1BQ659C4 914 aaKnown RBP13.99□□□□□ -0.17
USP1-203ENST00000442679 MOXD1Q6UVY6 613 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 LENG9Q96B70 501 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 INTS4Q96HW7 963 aaKnown RBP13.99□□□□□ -0.17
USP1-203ENST00000442679 GPR20Q99678 358 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 NAP1L4Q99733 375 aaKnown RBP13.99□□□□□ -0.17
USP1-203ENST00000442679 FOXP1Q9H334 677 aaPredicted RBP13.99□□□□□ -0.17
USP1-203ENST00000442679 JPH1Q9HDC5 661 aaPredicted RBP13.99□□□□□ -0.17
USP1-203ENST00000442679 FOXD4L1Q9NU39 408 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 ATP11BQ9Y2G3 1177 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 TELO2Q9Y4R8 837 aa13.99□□□□□ -0.17
USP1-203ENST00000442679 MSH4O15457 936 aa13.98□□□□□ -0.17
USP1-203ENST00000442679 HOXD8P13378 290 aaPredicted RBP13.98□□□□□ -0.17
USP1-203ENST00000442679 CHMP4BP1P59074 171 aa13.98□□□□□ -0.17
USP1-203ENST00000442679 ITGA7Q13683 1181 aa13.98□□□□□ -0.17
USP1-203ENST00000442679 SNX17Q15036 470 aa13.98□□□□□ -0.17
USP1-203ENST00000442679 TRIM60Q495X7 471 aa13.98□□□□□ -0.17
USP1-203ENST00000442679 C1orf53Q5VUE5 145 aa13.98□□□□□ -0.17
USP1-203ENST00000442679 PPP4R3AQ6IN85 833 aa13.98□□□□□ -0.17
USP1-203ENST00000442679 MBOAT7Q96N66 472 aa13.98□□□□□ -0.17
USP1-203ENST00000442679 TBC1D22BQ9NU19 505 aa13.98□□□□□ -0.17
USP1-203ENST00000442679 SLC9A2Q9UBY0 812 aa13.98□□□□□ -0.17
USP1-203ENST00000442679 DDX25Q9UHL0 483 aaKnown RBP13.98□□□□□ -0.17
USP1-203ENST00000442679 GRIN2DO15399 1336 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 TNRC18O15417 2968 aaPredicted RBP13.97□□□□□ -0.17
USP1-203ENST00000442679 GSTTP1A0A1W2PQM5 241 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 DDX39AO00148 427 aaKnown RBP13.97□□□□□ -0.17
USP1-203ENST00000442679 ARVCFO00192 962 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 DHX15O43143 795 aaKnown RBP13.97□□□□□ -0.17
USP1-203ENST00000442679 ZNF286BP0CG31 522 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 GCFC2P16383 781 aaKnown RBP13.97□□□□□ -0.17
USP1-203ENST00000442679 CDK7P50613 346 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 TLE2Q04725 743 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 NBPF20Q3BBV1 942 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 UTP14CQ5TAP6 766 aaKnown RBP13.97□□□□□ -0.17
USP1-203ENST00000442679 MCTP1Q6DN14 999 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 NOSTRINQ8IVI9 506 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 C7orf61Q8IZ16 206 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 SLC43A3Q8NBI5 491 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 SEPT1Q8WYJ6 367 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 KAT2BQ92831 832 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 SEZ6LQ9BYH1 1024 aa13.97□□□□□ -0.17
USP1-203ENST00000442679 DNAH12Q6ZR08 3092 aa13.96□□□□□ -0.17
USP1-203ENST00000442679 KIF28PB7ZC32 967 aa13.96□□□□□ -0.17
USP1-203ENST00000442679 SLC37A4O43826 429 aa13.96□□□□□ -0.17
USP1-203ENST00000442679 PQBP1O60828 265 aaKnown RBP13.96□□□□□ -0.17
USP1-203ENST00000442679 LGALS2P05162 132 aa13.96□□□□□ -0.17
USP1-203ENST00000442679 ATP2B1P20020 1258 aa13.96□□□□□ -0.17
USP1-203ENST00000442679 PDCP20941 246 aa13.96□□□□□ -0.17
USP1-203ENST00000442679 U2AF2P26368 475 aaKnown RBP eCLIP13.96□□□□□ -0.17
USP1-203ENST00000442679 TCF7P36402 384 aaPredicted RBP13.96□□□□□ -0.17
USP1-203ENST00000442679 PSEN2P49810 448 aa13.96□□□□□ -0.17
USP1-203ENST00000442679 ACTR2P61160 394 aa13.96□□□□□ -0.17
USP1-203ENST00000442679 SLC5A5Q92911 643 aa13.96□□□□□ -0.17
USP1-203ENST00000442679 GJA10Q969M2 543 aa13.96□□□□□ -0.17
USP1-203ENST00000442679 C16orf70Q9BSU1 422 aa13.96□□□□□ -0.17
USP1-203ENST00000442679 NR2E3Q9Y5X4 410 aa13.96□□□□□ -0.17
USP1-203ENST00000442679 DCDC2CA8MYV0 355 aa13.95□□□□□ -0.18
USP1-203ENST00000442679 MARCH6O60337 910 aa13.95□□□□□ -0.18
USP1-203ENST00000442679 GAS7O60861 476 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms