RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 MEIS1O00470 390 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 B4GALT4O60513 344 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 KCNA2P16389 499 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 PSEN2P49810 448 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 NLRP5P59047 1200 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 CYFIP1Q7L576 1253 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 TMEM199Q8N511 208 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 DAGLBQ8NCG7 672 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 KAT2BQ92831 832 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 GTF3C6Q969F1 213 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 ZFP91Q96JP5 570 aaPredicted RBP14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 LARP6Q9BRS8 491 aaKnown RBP14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 RNF39Q9H2S5 420 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 VPS54Q9P1Q0 977 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 NFASCO94856 1347 aa14.31□□□□□ -0.12
CDCA4P3-201ENST00000442572 PITPNM1O00562 1244 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 ZNF76P36508 570 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 USP11P51784 963 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 SETQ01105 290 aaPredicted RBP14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 FPGSQ05932 587 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 PPIGQ13427 754 aaKnown RBP eCLIP14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 MFSD10Q14728 455 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 LRIT3Q3SXY7 679 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 FAM47CQ5HY64 1035 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 JAKMIP3Q5VZ66 844 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 GPR20Q99678 358 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 C16orf70Q9BSU1 422 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 HIPK3Q9H422 1215 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 KCNH7Q9NS40 1196 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 TMEM260Q9NX78 707 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 ZNF215Q9UL58 517 aaPredicted RBP14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 PCDHA4Q9UN74 947 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 LIMCH1Q9UPQ0 1083 aa14.3□□□□□ -0.12
CDCA4P3-201ENST00000442572 H3BRB1 525 aa14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 LGALS2P05162 132 aa14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 ITGB8P26012 769 aa14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 CIITAP33076 1130 aa14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 ME3Q16798 604 aa14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 KIAA0753Q2KHM9 967 aa14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 BLIDQ8IZY5 108 aa14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 CCDC155Q8N6L0 562 aa14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 C7orf31Q8N865 590 aa14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 ZSCAN31Q96LW9 406 aaPredicted RBP14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 SDF4Q9BRK5 362 aa14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 NOC4LQ9BVI4 516 aaKnown RBP14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 TRPV6Q9H1D0 765 aa14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 TUT1Q9H6E5 874 aaKnown RBP14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 GTF2IRD1Q9UHL9 959 aa14.29□□□□□ -0.12
CDCA4P3-201ENST00000442572 ATP9AO75110 1047 aa14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 ZNF286BP0CG31 522 aa14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 BFSP2Q13515 415 aa14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 SCN5AQ14524 2016 aa14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 PTGISQ16647 500 aa14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 GPR153Q6NV75 609 aa14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 CAGE1Q8TC20 777 aa14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 SEPT1Q8WYJ6 367 aa14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 PGBD1Q96JS3 809 aa14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 KIF2CQ99661 725 aa14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 JPH1Q9HDC5 661 aaPredicted RBP14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 TRMT13Q9NUP7 481 aaKnown RBP14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 ORC3Q9UBD5 711 aaPredicted RBP14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 SLC9A2Q9UBY0 812 aa14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 NOD1Q9Y239 953 aa14.28□□□□□ -0.12
CDCA4P3-201ENST00000442572 EMSYQ7Z589 1322 aa14.27□□□□□ -0.12
CDCA4P3-201ENST00000442572 IGLV3-22A0A075B6J6 115 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 M0R2N6 131 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 PARNO95453 639 aaKnown RBP14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 CTDNEP1O95476 244 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 PFKMP08237 780 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 GNAT1P11488 350 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 RFC2P35250 354 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 FXR1P51114 621 aaKnown RBP eCLIP14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 RBL2Q08999 1139 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 RABEP1Q15276 862 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 PLA2G4DQ86XP0 818 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 RPUSD2Q8IZ73 545 aaKnown RBP14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 CYP2W1Q8TAV3 490 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 TNPO1Q92973 898 aaKnown RBP14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 LLPHQ9BRT6 129 aaKnown RBP14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 PHF20Q9BVI0 1012 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 PPP1R12CQ9BZL4 782 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 BCAS3Q9H6U6 928 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 AGO4Q9HCK5 861 aaKnown RBP14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 SH2B1Q9NRF2 756 aaPredicted RBP14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 TBC1D22BQ9NU19 505 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 HDAC6Q9UBN7 1215 aa14.27□□□□□ -0.13
CDCA4P3-201ENST00000442572 FAM86B1E9PN63 330 aa14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 PPFIA3O75145 1194 aa14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 FAM86B2P0C5J1 330 aa14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 ARP10275 920 aa14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 HOXC8P31273 242 aa14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 TCF7P36402 384 aaPredicted RBP14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 GDF6Q6KF10 455 aaPredicted RBP14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 PSRC1Q6PGN9 363 aaPredicted RBP14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 MOXD1Q6UVY6 613 aa14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 KRT25Q7Z3Z0 450 aa14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 RETREG2Q8NC44 543 aa14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 NSUN7Q8NE18 718 aaKnown RBP14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 AFAP1L1Q8TED9 768 aa14.26□□□□□ -0.13
CDCA4P3-201ENST00000442572 ALG1Q9BT22 464 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms