RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 SRPRBQ9Y5M8 271 aaKnown RBP11.15□□□□□ -0.62
LIN54-202ENST00000442461 NCK2O43639 380 aa11.15□□□□□ -0.63
LIN54-202ENST00000442461 INHBAP08476 426 aa11.15□□□□□ -0.63
LIN54-202ENST00000442461 CCNE1P24864 410 aa11.15□□□□□ -0.63
LIN54-202ENST00000442461 CACNA2D1P54289 1103 aa11.15□□□□□ -0.63
LIN54-202ENST00000442461 TOB2Q14106 344 aaPredicted RBP11.15□□□□□ -0.63
LIN54-202ENST00000442461 ATP6V0A1Q93050 837 aa11.15□□□□□ -0.63
LIN54-202ENST00000442461 ADAMTS1Q9UHI8 967 aa11.15□□□□□ -0.63
LIN54-202ENST00000442461 DCTN4Q9UJW0 460 aa11.15□□□□□ -0.63
LIN54-202ENST00000442461 LONP1P36776 959 aaKnown RBP11.14□□□□□ -0.63
LIN54-202ENST00000442461 RBM43Q6ZSC3 357 aaKnown RBP11.14□□□□□ -0.63
LIN54-202ENST00000442461 SNX29Q8TEQ0 813 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 RAPGEF5Q92565 580 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 GORASP1Q9BQQ3 440 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 DNAJC17Q9NVM6 304 aaKnown RBP11.14□□□□□ -0.63
LIN54-202ENST00000442461 LRCH1Q9Y2L9 728 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 DAPK3O43293 454 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 MT-ND3P03897 115 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 ZCCHC18P0CG32 403 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 ARFIP2P53365 341 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 AP1B1Q10567 949 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 ARHGAP44Q17R89 818 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 PAGE5Q96GU1 130 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 MAK16Q9BXY0 300 aaKnown RBP11.14□□□□□ -0.63
LIN54-202ENST00000442461 FAM192AQ9GZU8 254 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 DDX28Q9NUL7 540 aaKnown RBP11.14□□□□□ -0.63
LIN54-202ENST00000442461 BTBD7Q9P203 1132 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 HELBQ8NG08 1087 aaPredicted RBP11.14□□□□□ -0.63
LIN54-202ENST00000442461 SLC26A7Q8TE54 656 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 WDR60Q8WVS4 1066 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 CHP1Q99653 195 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 MMADHCQ9H3L0 296 aaPredicted RBP11.14□□□□□ -0.63
LIN54-202ENST00000442461 SLC39A2Q9NP94 309 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 KCND1Q9NSA2 647 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 DDX20Q9UHI6 824 aaKnown RBP11.14□□□□□ -0.63
LIN54-202ENST00000442461 KIAA0586Q9BVV6 1533 aa11.14□□□□□ -0.63
LIN54-202ENST00000442461 IL13P35225 146 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 OR2W6PQ8NHA6 318 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 TUBA8Q9NY65 449 aaPredicted RBP11.13□□□□□ -0.63
LIN54-202ENST00000442461 ARHGEF11O15085 1522 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 E2F6O75461 281 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 TTC4O95801 387 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 ARL1P40616 181 aaPredicted RBP11.13□□□□□ -0.63
LIN54-202ENST00000442461 STAT2P52630 851 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 EPHB1P54762 984 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 R3HDM1Q15032 1099 aaKnown RBP11.13□□□□□ -0.63
LIN54-202ENST00000442461 SGO2Q562F6 1265 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 PLEKHF1Q96S99 279 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 LBHD1Q9BQE6 289 aaPredicted RBP11.13□□□□□ -0.63
LIN54-202ENST00000442461 IMPG2Q9BZV3 1241 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 NDST4Q9H3R1 872 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 SMYD3Q9H7B4 428 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 MAGEF1Q9HAY2 307 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 BABAM1Q9NWV8 329 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 GGA2Q9UJY4 613 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 USTQ9Y2C2 406 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 A0A1W2PP64 1363 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 ARHGEF9O43307 516 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 C21orf2O43822 256 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 SASH1O94885 1247 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 MBD4O95243 580 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 CCDC159P0C7I6 412 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 TSPY3P0CV98 308 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 TSPY8P0CW00 308 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 PTPREP23469 700 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 FXR1P51114 621 aaKnown RBP eCLIP11.13□□□□□ -0.63
LIN54-202ENST00000442461 CCDC15Q0P6D6 951 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 ASPHQ12797 758 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 ZNF589Q86UQ0 364 aaPredicted RBP11.13□□□□□ -0.63
LIN54-202ENST00000442461 DDHD1Q8NEL9 900 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 TBC1D7Q9P0N9 293 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 ADGRL1O94910 1474 aa11.13□□□□□ -0.63
LIN54-202ENST00000442461 CCNT1O60563 726 aaKnown RBP11.12□□□□□ -0.63
LIN54-202ENST00000442461 KRT8P05787 483 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 MYL1P05976 194 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 KRT5P13647 590 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 MESDQ14696 234 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 NR1I3Q14994 352 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 EXOC3L4Q17RC7 722 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 RARS2Q5T160 578 aaKnown RBP11.12□□□□□ -0.63
LIN54-202ENST00000442461 NXNQ6DKJ4 435 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 IRGCQ6NXR0 463 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 ALKBH5Q6P6C2 394 aaKnown RBP11.12□□□□□ -0.63
LIN54-202ENST00000442461 PI4K2BQ8TCG2 481 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 EHD4Q9H223 541 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 A0A1W2PQC6 194 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 ZBBXA8MT70 800 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 SNRPA1P09661 255 aaKnown RBP11.12□□□□□ -0.63
LIN54-202ENST00000442461 CDC25AP30304 524 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 CDC25CP30307 473 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 KRT81Q14533 505 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 NONOQ15233 471 aaKnown RBP eCLIP11.12□□□□□ -0.63
LIN54-202ENST00000442461 GEN1Q17RS7 908 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 RFX8Q6ZV50 586 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 LRRC34Q8IZ02 419 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 SDCCAG3Q96C92 435 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.12□□□□□ -0.631e-7■■■■□ 24.9
LIN54-202ENST00000442461 GID8Q9NWU2 228 aa11.12□□□□□ -0.63
LIN54-202ENST00000442461 WARS2Q9UGM6 360 aaKnown RBP11.12□□□□□ -0.63
LIN54-202ENST00000442461 TRMT112Q9UI30 125 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms