RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 ECHDC1Q9NTX5 307 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 PNMA2Q9UL42 364 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 DDX19BQ9UMR2 479 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 STX8Q9UNK0 236 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 NOD1Q9Y239 953 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 NAV1Q8NEY1 1877 aa7.28□□□□□ -1.24
HDAC9-215ENST00000441986 COL11A1P12107 1806 aaPredicted RBP7.27□□□□□ -1.25
HDAC9-215ENST00000441986 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.27□□□□□ -1.25
HDAC9-215ENST00000441986 PRR33A8MZF0 331 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 ZBTB24O43167 697 aaPredicted RBP7.27□□□□□ -1.25
HDAC9-215ENST00000441986 ICAM1P05362 532 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 BAATQ14032 418 aaPredicted RBP7.27□□□□□ -1.25
HDAC9-215ENST00000441986 MUM1L1Q5H9M0 696 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 TMEM63BQ5T3F8 832 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 KRT40Q6A162 431 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 KCTD1Q719H9 257 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 ALYREFQ86V81 257 aaKnown RBP7.27□□□□□ -1.25
HDAC9-215ENST00000441986 GJD3Q8N144 294 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 DEPDC4Q8N2C3 294 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 CCDC155Q8N6L0 562 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 OR6J1Q8NGC5 347 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 GPATCH3Q96I76 525 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 RAD9AQ99638 391 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 ZBTB40Q9NUA8 1239 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 CTNNA3Q9UI47 895 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 CCPG1Q9ULG6 757 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 PRR12Q9ULL5 1215 aa7.27□□□□□ -1.25
HDAC9-215ENST00000441986 ABHD14A-ACY1A0A1B0GW23 586 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 PTPDC1A2A3K4 754 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 EPOPA6NHQ4 379 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 TSPY2A6NKD2 308 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 GPAA1O43292 621 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 LPXNO60711 386 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 EFCAB14O75071 495 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 TXNP10599 105 aaKnown RBP7.26□□□□□ -1.25
HDAC9-215ENST00000441986 PTGS1P23219 599 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 ALDH5A1P51649 535 aaPredicted RBP7.26□□□□□ -1.25
HDAC9-215ENST00000441986 WNT7BP56706 349 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 SNAP25P60880 206 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 NCOA4Q13772 614 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 IKBKEQ14164 716 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 PTGISQ16647 500 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 TRAF7Q6Q0C0 670 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 CAGE1Q8TC20 777 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 AFAP1L1Q8TED9 768 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 SCFD2Q8WU76 684 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 CHMP4CQ96CF2 233 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 PURBQ96QR8 312 aaKnown RBP7.26□□□□□ -1.25
HDAC9-215ENST00000441986 CRBNQ96SW2 442 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 SUGCTQ9HAC7 445 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 CDV3Q9UKY7 258 aaKnown RBP7.26□□□□□ -1.25
HDAC9-215ENST00000441986 DDX49Q9Y6V7 483 aaKnown RBP7.26□□□□□ -1.25
HDAC9-215ENST00000441986 PARP14Q460N5 1801 aa7.26□□□□□ -1.25
HDAC9-215ENST00000441986 FAM86C2PA6NEL3 165 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 SELPP16109 830 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 CALML3P27482 149 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 CHMP4BP1P59074 171 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 PPARAQ07869 468 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 PPP2R5BQ15173 497 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 LEXMQ3ZCV2 418 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 PLA2G2CQ5R387 149 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 RNF20Q5VTR2 975 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 RNF207Q6ZRF8 634 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 FAM178BQ8IXR5 827 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 DNERQ8NFT8 737 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 DCAF4Q8WV16 495 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 UIMC1Q96RL1 719 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 TGS1Q96RS0 853 aaKnown RBP7.25□□□□□ -1.25
HDAC9-215ENST00000441986 NAPBQ9H115 298 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 KCNH6Q9H252 994 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 C11orf16Q9NQ32 467 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 FAM50BQ9Y247 325 aa7.25□□□□□ -1.25
HDAC9-215ENST00000441986 TCF20Q9UGU0 1960 aaKnown RBP7.25□□□□□ -1.25
HDAC9-215ENST00000441986 ESPNB1AK53 854 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 SMARCA5O60264 1052 aaPredicted RBP7.24□□□□□ -1.25
HDAC9-215ENST00000441986 RANBP6O60518 1105 aaKnown RBP7.24□□□□□ -1.25
HDAC9-215ENST00000441986 ARHGEF15O94989 841 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 GJB5O95377 273 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 BRD1O95696 1058 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 CASTP20810 708 aaKnown RBP7.24□□□□□ -1.25
HDAC9-215ENST00000441986 KCNA5P22460 613 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 RPIAP49247 311 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 ERVK-21P61565 698 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 WDR5P61964 334 aaKnown RBP7.24□□□□□ -1.25
HDAC9-215ENST00000441986 HNRNPUQ00839 825 aaKnown RBP eCLIP7.24□□□□□ -1.25
HDAC9-215ENST00000441986 PTPROQ16827 1216 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 CCDC96Q2M329 555 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 EML3Q32P44 896 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 PPP1R18Q6NYC8 613 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 CNKSR3Q6P9H4 555 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 BTNL9Q6UXG8 535 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 SESTD1Q86VW0 696 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 C7orf31Q8N865 590 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.24□□□□□ -1.25
HDAC9-215ENST00000441986 UBE2Q2Q8WVN8 375 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 UPF3BQ9BZI7 483 aaKnown RBP7.24□□□□□ -1.25
HDAC9-215ENST00000441986 MAF1Q9H063 256 aa7.24□□□□□ -1.25
HDAC9-215ENST00000441986 RANBP17Q9H2T7 1088 aaKnown RBP7.24□□□□□ -1.25
HDAC9-215ENST00000441986 UBE2ZQ9H832 354 aaPredicted RBP7.24□□□□□ -1.25
HDAC9-215ENST00000441986 EPB41L4AQ9HCS5 686 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms