RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 MLLT1Q03111 559 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 SSRP1Q08945 709 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 PRDM2Q13029 1718 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 STRN3Q13033 797 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 SP140Q13342 867 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 ARHGEF6Q15052 776 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 PPP1R7Q15435 360 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 CCDC178Q5BJE1 867 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 CAVIN4Q5BKX8 364 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 CCDC30Q5VVM6 783 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 CCDC102BQ68D86 513 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 CNNM4Q6P4Q7 775 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 DSTYKQ6XUX3 929 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 CCDC80Q76M96 950 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 EPM2AIP1Q7L775 607 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 ZER1Q7Z7L7 766 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 FCHSD1Q86WN1 690 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 PEX5LQ8IYB4 626 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 SLFN12Q8IYM2 578 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 CBARPQ8N350 705 aaPredicted RBP4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 AFAP1Q8N556 730 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 MYCT1Q8N699 235 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 ZNF280CQ8ND82 737 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 TBC1D22AQ8WUA7 517 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 HDAC7Q8WUI4 952 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 RUFY2Q8WXA3 655 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 SLC7A3Q8WY07 619 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 GTPBP3Q969Y2 492 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 SHDQ96IW2 340 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 SGCZQ96LD1 299 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 RBM14Q96PK6 669 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 CSRNP1Q96S65 589 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 SH3GL1Q99961 368 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 PI4K2AQ9BTU6 479 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 TTPALQ9BTX7 342 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 TARS2Q9BW92 718 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 TEX13BQ9BXU2 312 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 CAPS2Q9BXY5 557 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 TRIM7Q9C029 511 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 PUS7LQ9H0K6 701 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 MYLK2Q9H1R3 596 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 SLC12A5Q9H2X9 1139 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 BRD9Q9H8M2 597 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 VPS37BQ9H9H4 285 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 GRPEL1Q9HAV7 217 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 TRPV4Q9HBA0 871 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 ETNK1Q9HBU6 452 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 UBAP1Q9NZ09 502 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 CHMP5Q9NZZ3 219 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 SAP30BPQ9UHR5 308 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 SERTAD1Q9UHV2 236 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 KCNH4Q9UQ05 1017 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 TMEM98Q9Y2Y6 226 aa4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 MRPL11Q9Y3B7 192 aaKnown RBP4.42□□□□□ -1.7
R3HDM1-209ENST00000441871 CCDC69A6NI79 296 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 RRN3P2A6NIE6 340 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 LRRC10BA6NIK2 292 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 B4DLN1 442 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 H3BRJ5 948 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 H7C0S8 307 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 RNF225M0QZC1 329 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 GPR25O00155 361 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 MCF2LO15068 1137 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 POLR3GO15318 223 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 AHCYL1O43865 530 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 USO1O60763 962 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 ADAMTS4O75173 837 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 MAFO75444 373 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 STAM2O75886 525 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 FBXO21O94952 628 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 HSPA4LO95757 839 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 PAHP00439 452 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 CYP1A2P05177 515 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 PF4V1P10720 104 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 TATP17735 454 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 PBLDP30039 288 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 GNL1P36915 607 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 GRIK1P39086 918 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 MATR3P43243 847 aaKnown RBP eCLIP4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 ASMTP46597 345 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 NPTX2P47972 431 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 CENPAP49450 140 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 SMTNP53814 917 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 CLNS1AP54105 237 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 ATXN1P54253 815 aaKnown RBP4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 GTF2IP78347 998 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 AP1B1Q10567 949 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 IKQ13123 557 aaPredicted RBP4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 SCARB2Q14108 478 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 PDE3AQ14432 1141 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 TERF2Q15554 542 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 DBN1Q16643 649 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 C4orf17Q53FE4 359 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 TTC39AQ5SRH9 613 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 FKBP15Q5T1M5 1219 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 SYDE2Q5VT97 1194 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 C1orf53Q5VUE5 145 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 FAM117BQ6P1L5 589 aa4.41□□□□□ -1.7
R3HDM1-209ENST00000441871 TLDC1Q6P9B6 456 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms