RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 KLRC3Q07444 240 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 IKQ13123 557 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-210ENST00000441703 PTK7Q13308 1070 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 OS9Q13438 667 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-210ENST00000441703 POLA2Q14181 598 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 NOLC1Q14978 699 aaKnown RBP eCLIP7.48□□□□□ -1.21
HDAC6-210ENST00000441703 RABEP1Q15276 862 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 ZNF618Q5T7W0 954 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 CAVIN1Q6NZI2 390 aaKnown RBP7.48□□□□□ -1.21
HDAC6-210ENST00000441703 NSMFQ6X4W1 530 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 C16orf86Q6ZW13 317 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 RBM23Q86U06 439 aaKnown RBP7.48□□□□□ -1.21
HDAC6-210ENST00000441703 SESTD1Q86VW0 696 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 CCDC105Q8IYK2 499 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 C7orf31Q8N865 590 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 SDR42E1Q8WUS8 393 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 ANKRD7Q92527 254 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 ARHGAP45Q92619 1136 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 TRERF1Q96PN7 1200 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 MPHOSPH6Q99547 160 aaKnown RBP7.48□□□□□ -1.21
HDAC6-210ENST00000441703 DIAPH3Q9NSV4 1193 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 ADD3Q9UEY8 706 aaKnown RBP7.48□□□□□ -1.21
HDAC6-210ENST00000441703 CDV3Q9UKY7 258 aaKnown RBP7.48□□□□□ -1.21
HDAC6-210ENST00000441703 R4GN57 208 aa7.48□□□□□ -1.21
HDAC6-210ENST00000441703 A6NJR5 290 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 RSPH10B2B2RC85 870 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 BRD1O95696 1058 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 ADRB1P08588 477 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 RSPH10BP0C881 870 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 RFX1P22670 979 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 ATXN1P54253 815 aaKnown RBP7.47□□□□□ -1.21
HDAC6-210ENST00000441703 TTF1Q15361 905 aaPredicted RBP7.47□□□□□ -1.21
HDAC6-210ENST00000441703 MCTP1Q6DN14 999 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 ADGRD2Q7Z7M1 963 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 CREBRFQ8IUR6 639 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 LRRC47Q8N1G4 583 aaKnown RBP7.47□□□□□ -1.21
HDAC6-210ENST00000441703 LCORLQ8N3X6 602 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 FAM184AQ8NB25 1140 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 DTWD2Q8NBA8 298 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 SSH3Q8TE77 659 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 NEK1Q96PY6 1258 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 RTP3Q9BQQ7 232 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 PLVAPQ9BX97 442 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 ATP8A2Q9NTI2 1148 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 CYP39A1Q9NYL5 469 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 GTF2IRD1Q9UHL9 959 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.47□□□□□ -1.21
HDAC6-210ENST00000441703 MAP1BP46821 2468 aaKnown RBP7.47□□□□□ -1.21
HDAC6-210ENST00000441703 ADGRA3Q8IWK6 1321 aa7.47□□□□□ -1.21
HDAC6-210ENST00000441703 EP300Q09472 2414 aaPredicted RBP7.47□□□□□ -1.21
HDAC6-210ENST00000441703 TCRBV5S4A2TA0A5A2 114 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 RBM47A0AV96 593 aaKnown RBP7.46□□□□□ -1.22
HDAC6-210ENST00000441703 CCDC66A2RUB6 948 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 CTIFO43310 598 aaKnown RBP7.46□□□□□ -1.22
HDAC6-210ENST00000441703 GLP2RO95838 553 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 TXNP10599 105 aaKnown RBP7.46□□□□□ -1.22
HDAC6-210ENST00000441703 CASTP20810 708 aaKnown RBP7.46□□□□□ -1.22
HDAC6-210ENST00000441703 THPOP40225 353 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 ALDH5A1P51649 535 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-210ENST00000441703 PDE4DQ08499 809 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 BTG3Q14201 252 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-210ENST00000441703 PLEKHG4Q58EX7 1191 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 SLC9C2Q5TAH2 1124 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 C12orf60Q5U649 245 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 DHX37Q8IY37 1157 aaKnown RBP7.46□□□□□ -1.22
HDAC6-210ENST00000441703 DCLK2Q8N568 766 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 MICAL1Q8TDZ2 1067 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 MORC4Q8TE76 937 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 SCFD2Q8WU76 684 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 SUSD6Q92537 303 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 COPS5Q92905 334 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 EAF2Q96CJ1 260 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-210ENST00000441703 CTAGE1Q96RT6 745 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 DNAJC2Q99543 621 aaKnown RBP7.46□□□□□ -1.22
HDAC6-210ENST00000441703 ALG1Q9BT22 464 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 KATNAL1Q9BW62 490 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 CCDC8Q9H0W5 538 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-210ENST00000441703 CHMP4BQ9H444 224 aaKnown RBP7.46□□□□□ -1.22
HDAC6-210ENST00000441703 TSPY26PQ9H489 355 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 TLE6Q9H808 572 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 NCDNQ9UBB6 729 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 HDAC6Q9UBN7 1215 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 CHD6Q8TD26 2715 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 ZNF532Q9HCE3 1301 aa7.46□□□□□ -1.22
HDAC6-210ENST00000441703 LOC102724159A0A0B4J2E5 919 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 DCDC2BA2VCK2 349 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 PRR5-ARHGAP8B1AHC4 643 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 STK25O00506 426 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 SURF6O75683 361 aaKnown RBP7.45□□□□□ -1.22
HDAC6-210ENST00000441703 PTMAP06454 111 aaKnown RBP7.45□□□□□ -1.22
HDAC6-210ENST00000441703 MMP3P08254 477 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 BMP3P12645 472 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 HOXB3P14651 431 aaPredicted RBP7.45□□□□□ -1.22
HDAC6-210ENST00000441703 AOC1P19801 751 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 PSEN2P49810 448 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 STAT2P52630 851 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 ARHGAP8P85298 464 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 COL9A3Q14050 684 aaPredicted RBP7.45□□□□□ -1.22
HDAC6-210ENST00000441703 MBTPS1Q14703 1052 aa7.45□□□□□ -1.22
HDAC6-210ENST00000441703 PWP2Q15269 919 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms