RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 KCNJ12Q14500 433 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 PLS1Q14651 629 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 EAPPQ56P03 285 aaPredicted RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 CDKAL1Q5VV42 579 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 SPECC1LQ69YQ0 1117 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 POTEBQ6S5H4 581 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 DYMQ7RTS9 669 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 CLEC4DQ8WXI8 215 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 CCDC51Q96ER9 411 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 RMDN3Q96TC7 470 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 EIF2AK1Q9BQI3 630 aaKnown RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 JADE2Q9NQC1 790 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 KCND2Q9NZV8 630 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 CLEC11AQ9Y240 323 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 AFG3L2Q9Y4W6 797 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 ZNF536O15090 1300 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 ARHGEF35A5YM69 484 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 GLTPD2A6NH11 291 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 IPO5O00410 1097 aaKnown RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 PES1O00541 588 aaKnown RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 GNA14O95837 355 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 MYCLP12524 364 aaPredicted RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 SFNP31947 248 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 COPB1P53618 953 aaKnown RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 VGLL4Q14135 290 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 HERC4Q5GLZ8 1057 aaPredicted RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 PPP4R3CPQ6ZMV5 832 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 LRRC8AQ8IWT6 810 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 SMYD4Q8IYR2 804 aaPredicted RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 GPRASP2Q96D09 838 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 MTRQ99707 1265 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 SAMSN1Q9NSI8 373 aaKnown RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 UBIAD1Q9Y5Z9 338 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 SNCAIPQ9Y6H5 919 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 PFASO15067 1338 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 IGLV3-22A0A075B6J6 115 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 A0A1B0GTH6 734 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 ADM5C9JUS6 153 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 NFIBO00712 420 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 EDIL3O43854 480 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 TUBB4AP04350 444 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 SKILP12757 684 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 CD44P16070 742 aaKnown RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 YBX3P16989 372 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS50-205ENST00000441602 COASYQ13057 564 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 PPIL2Q13356 520 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 NOLC1Q14978 699 aaKnown RBP eCLIP6.7□□□□□ -1.34
VPS50-205ENST00000441602 SYT2Q8N9I0 419 aaPredicted RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 LENG9Q96B70 501 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 SRRTQ9BXP5 876 aaKnown RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 RTN4Q9NQC3 1192 aaKnown RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 SEL1LQ9UBV2 794 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 ADD3Q9UEY8 706 aaKnown RBP6.7□□□□□ -1.34
VPS50-205ENST00000441602 PNMA3Q9UL41 463 aa6.7□□□□□ -1.34
VPS50-205ENST00000441602 E9PMD0 336 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 CHMP2AO43633 222 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 MED24O75448 989 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 PSMD10O75832 226 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 SLC25A27O95847 323 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 EIF2AK2P19525 551 aaKnown RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 RPS6P62753 249 aaKnown RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 UBXN2AP68543 259 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 MTMR1Q13613 665 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 CNGA4Q8IV77 575 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 TPH2Q8IWU9 490 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 TBC1D5Q92609 795 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 ZNF830Q96NB3 372 aaPredicted RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 TIPINQ9BVW5 301 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 ZSWIM4Q9H7M6 989 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 ELP3Q9H9T3 547 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 VAV3Q9UKW4 847 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 FRMPD4Q14CM0 1322 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 GOLGA6L9A6NEM1 432 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 SPDYE5A6NIY4 337 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 AKR1B15C9JRZ8 316 aaPredicted RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 CALUO43852 315 aaPredicted RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 P4HBP07237 508 aaKnown RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 KCNJ6P48051 423 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 DNM2P50570 870 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 BAATQ14032 418 aaPredicted RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 TCP11X2Q5H9J9 407 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 CATSPER3Q86XQ3 398 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 SLC17A8Q8NDX2 589 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 KIAA1524Q8TCG1 905 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 DYDC2Q96IM9 177 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 PCMTD1Q96MG8 357 aaPredicted RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 CEP63Q96MT8 703 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 TAAR1Q96RJ0 339 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 IWS1Q96ST2 819 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 PDCD2LQ9BRP1 358 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 NUP58Q9BVL2 599 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 NAA15Q9BXJ9 866 aaKnown RBP6.69□□□□□ -1.34
VPS50-205ENST00000441602 SLC39A2Q9NP94 309 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 PXMP2Q9NR77 195 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 MAPK8IP1Q9UQF2 711 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 SAMM50Q9Y512 469 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 ITIH6Q6UXX5 1313 aa6.69□□□□□ -1.34
VPS50-205ENST00000441602 POTEFA5A3E0 1075 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms