RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 RAB27AP51159 221 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 RPS6KA3P51812 740 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 ZRSR2Q15696 482 aaKnown RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 MEA1Q16626 185 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 UBAP2Q5T6F2 1119 aaKnown RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 CDCA2Q69YH5 1023 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 TRPM8Q7Z2W7 1104 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 RPUSD2Q8IZ73 545 aaKnown RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 P2RX5Q93086 422 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 DUSP9Q99956 384 aaKnown RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 NUCKS1Q9H1E3 243 aaKnown RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 FGFR1OP2Q9NVK5 253 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 ARPP21Q9UBL0 812 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 DBR1Q9UK59 544 aaKnown RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 CRYBG1Q9Y4K1 1723 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 ATXN2Q99700 1313 aaKnown RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 MYH10P35580 1976 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 GOLGA6L10A0A0M3HER8 536 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 PPIP5K2O43314 1243 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 NMT2O60551 498 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 TOM1O60784 492 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 SNRPA1P09661 255 aaKnown RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 NQO1P15559 274 aaKnown RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 PECAM1P16284 738 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 ATP4AP20648 1035 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 PLTPP55058 493 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 MCCD1P59942 119 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 LACTBP83111 547 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 IFIT5Q13325 482 aaKnown RBP8.23□□□□□ -1.09
HDAC9-214ENST00000441542 LCORLQ8N3X6 602 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 FAM133AQ8N9E0 248 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 TEKT4Q8WW24 435 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 ZFATQ9P243 1243 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 FRMD4BQ9Y2L6 1034 aa8.23□□□□□ -1.09
HDAC9-214ENST00000441542 MST1RQ04912 1400 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 A0A1W2PQC6 194 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 ORC4O43929 436 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 PAPOLAP51003 745 aaKnown RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 LAMB3Q13751 1172 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 TTI2Q6NXR4 508 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 FAM210AQ96ND0 272 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 TMEM165Q9HC07 324 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 GPBP1L1Q9HC44 474 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 ZMYND8Q9ULU4 1186 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 PXDNQ92626 1479 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 SPDYE3A6NKU9 549 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 RGS16O15492 202 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 DNAJC8O75937 253 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 HSPA9P38646 679 aaKnown RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 RAD23BP54727 409 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 ATP11AP98196 1134 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 AMOTQ4VCS5 1084 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 FAM47AQ5JRC9 791 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 IFIT1BQ5T764 474 aaKnown RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 B4GALNT2Q8NHY0 566 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 PURBQ96QR8 312 aaKnown RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 STRBPQ96SI9 672 aaKnown RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 LSM14BQ9BX40 385 aaKnown RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 TRIM4Q9C037 500 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 NDST4Q9H3R1 872 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 PLCB1Q9NQ66 1216 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 SNX24Q9Y343 169 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 STK36Q9NRP7 1315 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 LRRD1A4D1F6 860 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 KRT13P13646 458 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 ATP2A2P16615 1042 aaKnown RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 ZNF211Q13398 564 aaPredicted RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 TNIP1Q15025 636 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 INF2Q27J81 1249 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 RNF220Q5VTB9 566 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 NUGGCQ68CJ6 796 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 ZNF449Q6P9G9 518 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 DTHD1Q6ZMT9 781 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 SGMS1Q86VZ5 419 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 NELFCDQ8IXH7 590 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 STAG2Q8N3U4 1231 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 MAB21L3Q8N8X9 362 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 TMEM60Q9H2L4 133 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 BATF3Q9NR55 127 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 SEPT11Q9NVA2 429 aaKnown RBP8.22□□□□□ -1.09
HDAC9-214ENST00000441542 DLGAP2Q9P1A6 1054 aa8.22□□□□□ -1.09
HDAC9-214ENST00000441542 HIP1RO75146 1068 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 ATF3P18847 181 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 RFC5P40937 340 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 CABP4P57796 275 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 EVX2Q03828 476 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 WDR78Q5VTH9 848 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 TMEM154Q6P9G4 183 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 CATIPQ7Z7H3 387 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 ELOA2Q8IYF1 753 aaPredicted RBP8.21□□□□□ -1.09
HDAC9-214ENST00000441542 FBXL16Q8N461 479 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 ACSBG1Q96GR2 724 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 TTYH3Q9C0H2 523 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 KDM4CQ9H3R0 1056 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 THAP9Q9H5L6 903 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 LRP2BPQ9P2M1 347 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 C2CD2Q9Y426 696 aa8.21□□□□□ -1.09
HDAC9-214ENST00000441542 TMEM131LA2VDJ0 1609 aa8.21□□□□□ -1.1
HDAC9-214ENST00000441542 A0A087X0T9 212 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms