RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 DGKIO75912 1065 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 ATP5DP30049 168 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 BBS9Q3SYG4 887 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 RALYLQ86SE5 291 aaKnown RBP11.66□□□□□ -0.54
SYNE2-206ENST00000441438 TRMT2AQ8IZ69 625 aaKnown RBP11.66□□□□□ -0.54
SYNE2-206ENST00000441438 FBF1Q8TES7 1133 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 HPS4Q9NQG7 708 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 OGFRQ9NZT2 677 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 SH3BGRL2Q9UJC5 107 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 STRIP2Q9ULQ0 834 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 MAPK8IP3Q9UPT6 1336 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 KIF24Q5T7B8 1368 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 PLEKHH1Q9ULM0 1364 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 CICQ96RK0 1608 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-206ENST00000441438 C17orf113A0A1B0GUU1 675 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 A0A1B0GVC2 190 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 RTN2O75298 545 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 MZF1P28698 734 aaPredicted RBP11.66□□□□□ -0.54
SYNE2-206ENST00000441438 NR2C2P49116 596 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 PPP2R3AQ06190 1150 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 SLC6A19Q695T7 634 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 ENOSF1Q7L5Y1 443 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 SLC9B2Q86UD5 537 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 LRRTM3Q86VH5 581 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 NSUN6Q8TEA1 469 aaKnown RBP11.66□□□□□ -0.54
SYNE2-206ENST00000441438 GPRASP2Q96D09 838 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 RABEP2Q9H5N1 569 aa11.66□□□□□ -0.54
SYNE2-206ENST00000441438 INO80B-WBP1J3KQ70 363 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 ZNF189O75820 626 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-206ENST00000441438 PPP2R5DQ14738 602 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 LIN54Q6MZP7 749 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 UTP15Q8TED0 518 aaKnown RBP11.65□□□□□ -0.54
SYNE2-206ENST00000441438 YIPF4Q9BSR8 244 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 LOC102724428A0A0B4J2F2 783 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 FYB1O15117 783 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 AHCYL1O43865 530 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 SIK1P57059 783 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 PTGDRQ13258 359 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 KRT71Q3SY84 523 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 BPHLQ86WA6 291 aaPredicted RBP11.65□□□□□ -0.54
SYNE2-206ENST00000441438 TMCO5AQ8N6Q1 288 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 ARL8AQ96BM9 186 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 JAKMIP1Q96N16 626 aaKnown RBP11.65□□□□□ -0.54
SYNE2-206ENST00000441438 CCPG1Q9ULG6 757 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 MAPK8IP1Q9UQF2 711 aa11.65□□□□□ -0.54
SYNE2-206ENST00000441438 COL18A1P39060 1754 aa11.65□□□□□ -0.55
SYNE2-206ENST00000441438 MASP2O00187 686 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 SLC3A2P08195 630 aaKnown RBP11.64□□□□□ -0.55
SYNE2-206ENST00000441438 GRIK3Q13003 919 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 SART3Q15020 963 aaKnown RBP11.64□□□□□ -0.55
SYNE2-206ENST00000441438 SLC14A2Q15849 920 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 CNSTQ6PJW8 725 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 EPHX4Q8IUS5 362 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 ZNF483Q8TF39 744 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-206ENST00000441438 VPS37BQ9H9H4 285 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 CD93Q9NPY3 652 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 ATAD2Q6PL18 1390 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 NPC1L1Q9UHC9 1359 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 CPSF1Q10570 1443 aaKnown RBP11.64□□□□□ -0.55
SYNE2-206ENST00000441438 XRCC6P12956 609 aaKnown RBP eCLIP11.64□□□□□ -0.55
SYNE2-206ENST00000441438 PHKA1P46020 1223 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 ASMTP46597 345 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 SAFBQ15424 915 aaKnown RBP eCLIP11.64□□□□□ -0.55
SYNE2-206ENST00000441438 SPATA21Q7Z572 469 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
SYNE2-206ENST00000441438 PPP1R9BQ96SB3 815 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 MRPL46Q9H2W6 279 aaKnown RBP11.64□□□□□ -0.55
SYNE2-206ENST00000441438 MMADHCQ9H3L0 296 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-206ENST00000441438 POLMQ9NP87 494 aaPredicted RBP11.64□□□□□ -0.55
SYNE2-206ENST00000441438 MCM8Q9UJA3 840 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 TSR3Q9UJK0 312 aaKnown RBP11.64□□□□□ -0.55
SYNE2-206ENST00000441438 ROBO2Q9HCK4 1378 aa11.64□□□□□ -0.55
SYNE2-206ENST00000441438 PMM2O15305 246 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 P4HA2O15460 535 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 ASMTLO95671 621 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 VIMP08670 466 aaKnown RBP11.63□□□□□ -0.55
SYNE2-206ENST00000441438 P4HA1P13674 534 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 CTCFP49711 727 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-206ENST00000441438 NLRP6P59044 892 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 TUBA1BP68363 451 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 KCNC4Q03721 635 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 TUBA1AQ71U36 451 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 PDCL2Q8N4E4 241 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 EPS8L1Q8TE68 723 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 SLC12A5Q9H2X9 1139 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 SPATS2LQ9NUQ6 558 aaKnown RBP11.63□□□□□ -0.55
SYNE2-206ENST00000441438 MRPL11Q9Y3B7 192 aaKnown RBP11.63□□□□□ -0.55
SYNE2-206ENST00000441438 BCAR3O75815 825 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 ATP5OP48047 213 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 CCT5P48643 541 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 SGCGQ13326 291 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 ZNF619Q8N2I2 560 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 KCTD13Q8WZ19 329 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 ADAMTS1Q9UHI8 967 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 RGPD8O14715 1765 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-206ENST00000441438 STX6O43752 255 aa11.63□□□□□ -0.55
SYNE2-206ENST00000441438 TCF7P36402 384 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-206ENST00000441438 GNL1P36915 607 aaPredicted RBP11.63□□□□□ -0.55
SYNE2-206ENST00000441438 IL1RL1Q01638 556 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms