RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 GJB5O95377 273 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 LGALS2P05162 132 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 RSPH10BP0C881 870 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 HOXC8P31273 242 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 MCM5P33992 734 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 DEFB103AP81534 67 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 HIC1Q14526 733 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 MBTPS1Q14703 1052 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 SKIV2LQ15477 1246 aaKnown RBP13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 TCTN1Q2MV58 587 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 PCNX4Q63HM2 1172 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 METTL7BQ6UX53 244 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 NFXL1Q6ZNB6 911 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 CYFIP1Q7L576 1253 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 SMARCC2Q8TAQ2 1214 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 ADAMTS19Q8TE59 1207 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 ATP6V0A1Q93050 837 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 TMEM87BQ96K49 555 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 SENP7Q9BQF6 1050 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 MYL10Q9BUA6 226 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 BCAS3Q9H6U6 928 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 RTEL1Q9NZ71 1219 aa13.41□□□□□ -0.26
UBE2D4-204ENST00000440899 LCHNA4D1U4 455 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 CCDC69A6NI79 296 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 PIK3CDO00329 1044 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 MEIS2O14770 477 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 LGR5O75473 907 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 SMIM10L2AP0DMW4 78 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 SMIM10L2BP0DMW5 78 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 CALM1P0DP23 149 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 CALM2P0DP24 149 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 CALM3P0DP25 149 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 GNAT1P11488 350 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 THPOP40225 353 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 SEMA3FQ13275 785 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 GRB10Q13322 594 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 USP17L6PQ6QN14 398 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 TMCO2Q7Z6W1 182 aaPredicted RBP13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 UHRF1Q96T88 793 aaPredicted RBP13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 RNPEPQ9H4A4 650 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 COG5Q9UP83 839 aa13.4□□□□□ -0.26
UBE2D4-204ENST00000440899 SH2B2O14492 632 aaPredicted RBP13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 CAND2O75155 1236 aa13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 BMP1P13497 986 aa13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 LIFRP42702 1097 aa13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 KRT40Q6A162 431 aa13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 NLRX1Q86UT6 975 aa13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 SRBD1Q8N5C6 995 aaKnown RBP13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 GIMAP8Q8ND71 665 aaPredicted RBP13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 DBF4BQ8NFT6 615 aa13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 GPR20Q99678 358 aa13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 LSG1Q9H089 658 aaKnown RBP13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 PSTPIP2Q9H939 334 aa13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 LMCD1Q9NZU5 365 aa13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 ZNF215Q9UL58 517 aaPredicted RBP13.39□□□□□ -0.27
UBE2D4-204ENST00000440899 SLC27A2O14975 620 aa13.38□□□□□ -0.27
UBE2D4-204ENST00000440899 TREHO43280 583 aa13.38□□□□□ -0.27
UBE2D4-204ENST00000440899 PLEKHA8P1O95397 391 aa13.38□□□□□ -0.27
UBE2D4-204ENST00000440899 TFF2Q03403 129 aa13.38□□□□□ -0.27
UBE2D4-204ENST00000440899 PLEKHG4Q58EX7 1191 aa13.38□□□□□ -0.27
UBE2D4-204ENST00000440899 SPRED2Q7Z698 418 aa13.38□□□□□ -0.27
UBE2D4-204ENST00000440899 CDHR1Q96JP9 859 aa13.38□□□□□ -0.27
UBE2D4-204ENST00000440899 TGS1Q96RS0 853 aaKnown RBP13.38□□□□□ -0.27
UBE2D4-204ENST00000440899 ESYT1Q9BSJ8 1104 aa13.38□□□□□ -0.27
UBE2D4-204ENST00000440899 SETD4Q9NVD3 440 aa13.38□□□□□ -0.27
UBE2D4-204ENST00000440899 INSL6Q9Y581 213 aa13.38□□□□□ -0.27
UBE2D4-204ENST00000440899 LINC01553A4QN01 128 aa13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 LPXNO60711 386 aa13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 AMHP03971 560 aa13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 ERVK-21P61565 698 aa13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 NECTIN1Q15223 517 aa13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 UTP14CQ5TAP6 766 aaKnown RBP13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 CREB3L3Q68CJ9 461 aa13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 FAM117BQ6P1L5 589 aa13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 CMTR1Q8N1G2 835 aaKnown RBP13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 SEPT8Q92599 483 aa13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 GPRASP2Q96D09 838 aa13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 SLC12A7Q9Y666 1083 aa13.37□□□□□ -0.27
UBE2D4-204ENST00000440899 RXRAP19793 462 aa13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 ADAM17P78536 824 aa13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 SP4Q02446 784 aa13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 COL9A3Q14050 684 aaPredicted RBP13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 TRIM50Q86XT4 487 aa13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 MYOCDQ8IZQ8 938 aa13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 GDPD5Q8WTR4 605 aa13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 HLA-CQ95604 372 aa13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 SUGCTQ9HAC7 445 aa13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 ANO2Q9NQ90 1003 aa13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 MTUS1Q9ULD2 1270 aa13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 NRCAMQ92823 1304 aa13.36□□□□□ -0.27
UBE2D4-204ENST00000440899 MAFGO15525 162 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 CTSHP09668 335 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 KCNQ1P51787 676 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 HTRA4P83105 476 aaPredicted RBP13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 ARHGAP4P98171 946 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 RNF20Q5VTR2 975 aa13.35□□□□□ -0.27
UBE2D4-204ENST00000440899 SYNE3Q6ZMZ3 975 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms