RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 THAP9Q9H5L6 903 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 GOPCQ9HD26 462 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 INTS13Q9NVM9 706 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 LRWD1Q9UFC0 647 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 LIMA1Q9UHB6 759 aaKnown RBP10.22□□□□□ -0.77
HDAC6-209ENST00000440653 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.22□□□□□ -0.778e-7■■■□□ 18.4
HDAC6-209ENST00000440653 ABCB11O95342 1321 aa10.22□□□□□ -0.77
HDAC6-209ENST00000440653 NCOR1O75376 2440 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 PVALEFA0A1B0GWK0 134 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 ADAMTS3O15072 1205 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 TBX3O15119 743 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 INHAP05111 366 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 USP11P51784 963 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 TCP10Q12799 353 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 DLGAP5Q15398 846 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 QRICH1Q2TAL8 776 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 TMEM119Q4V9L6 283 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 SYDE2Q5VT97 1194 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 CEP135Q66GS9 1140 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 KLHL10Q6JEL2 608 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-209ENST00000440653 PPFIBP1Q86W92 1011 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 CLEC10AQ8IUN9 316 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 SLFN12Q8IYM2 578 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 ADSSL1Q8N142 457 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 ADAMTS19Q8TE59 1207 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 FAM151AQ8WW52 585 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 MBOAT7Q96N66 472 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 MTRQ99707 1265 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 LRFN3Q9BTN0 628 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 ANO3Q9BYT9 981 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 TRIM9Q9C026 710 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 CPVLQ9H3G5 476 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 PSTPIP2Q9H939 334 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 EHMT1Q9H9B1 1298 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 VAT1LQ9HCJ6 419 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 PAK6Q9NQU5 681 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-209ENST00000440653 GINM1Q9NU53 330 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 ADD3Q9UEY8 706 aaKnown RBP10.21□□□□□ -0.77
HDAC6-209ENST00000440653 DDX25Q9UHL0 483 aaKnown RBP10.21□□□□□ -0.77
HDAC6-209ENST00000440653 HCN4Q9Y3Q4 1203 aa10.21□□□□□ -0.77
HDAC6-209ENST00000440653 PHLPP2Q6ZVD8 1323 aa10.21□□□□□ -0.78
HDAC6-209ENST00000440653 CYP3A7-CYP3A51PA0A087WV96 503 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 USP17L10C9JJH3 530 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 AKR1B15C9JRZ8 316 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-209ENST00000440653 TBC1D12O60347 775 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 PLA2G6O60733 806 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 PPP1R11O60927 126 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-209ENST00000440653 FGFR1OPO95684 399 aaKnown RBP10.2□□□□□ -0.78
HDAC6-209ENST00000440653 NDUFB10O96000 172 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 BMP3P12645 472 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 CD44P16070 742 aaKnown RBP10.2□□□□□ -0.78
HDAC6-209ENST00000440653 CYP3A7P24462 503 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 PBX1P40424 430 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 ASIC1P78348 528 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 NR1I3Q14994 352 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 SUPT20HL1Q3ZLR7 823 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 KMT5BQ4FZB7 885 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 HYIQ5T013 277 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 UNC13DQ70J99 1090 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 KCTD1Q719H9 257 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 SV2BQ7L1I2 683 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 SH3BP5LQ7L8J4 393 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 APTXQ7Z2E3 356 aaKnown RBP10.2□□□□□ -0.78
HDAC6-209ENST00000440653 FBXO11Q86XK2 927 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 SLAIN1Q8ND83 568 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 KIF18AQ8NI77 898 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 LARP4BQ92615 738 aaKnown RBP10.2□□□□□ -0.78
HDAC6-209ENST00000440653 COA7Q96BR5 231 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 PPP1R13BQ96KQ4 1090 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 UHRF1Q96T88 793 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-209ENST00000440653 BAG1Q99933 345 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-209ENST00000440653 BLZF1Q9H2G9 400 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 SAMSN1Q9NSI8 373 aaKnown RBP10.2□□□□□ -0.78
HDAC6-209ENST00000440653 MAGEC2Q9UBF1 373 aaPredicted RBP10.2□□□□□ -0.78
HDAC6-209ENST00000440653 PCDHA1Q9Y5I3 950 aa10.2□□□□□ -0.78
HDAC6-209ENST00000440653 PARP14Q460N5 1801 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 LOC285556D6RIA3 1793 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 A0A1W2PQC6 194 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 CLRN2A0PK11 232 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 SPDYE3A6NKU9 549 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 KCNJ18B7U540 433 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 PIK3CDO00329 1044 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 SLC37A4O43826 429 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 KLRC4O43908 158 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 ADCY3O60266 1144 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 MFAP3LO75121 409 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 KIF20AO95235 890 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 TDP2O95551 362 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 FECHP22830 423 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 CCNE1P24864 410 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 SREBF1P36956 1147 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 STAT2P52630 851 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 CACNB3P54284 484 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 PSMD2Q13200 908 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 TNFAIP1Q13829 316 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 KCNJ12Q14500 433 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 ARID5BQ14865 1188 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 TCP11X2Q5H9J9 407 aa10.19□□□□□ -0.78
HDAC6-209ENST00000440653 E4F1Q66K89 784 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms