RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 ZNF112Q9UJU3 913 aa16.78■□□□□ 0.28
CPSF7-205ENST00000439958 KLRC4O43908 158 aa16.78■□□□□ 0.28
CPSF7-205ENST00000439958 C16orf45Q96MC5 204 aaPredicted RBP16.78■□□□□ 0.28
CPSF7-205ENST00000439958 HOXC10Q9NYD6 342 aa16.78■□□□□ 0.28
CPSF7-205ENST00000439958 RABGAP1Q9Y3P9 1069 aa16.78■□□□□ 0.28
CPSF7-205ENST00000439958 AFG3L2Q9Y4W6 797 aa16.78■□□□□ 0.28
CPSF7-205ENST00000439958 KCNJ18B7U540 433 aa16.78■□□□□ 0.28
CPSF7-205ENST00000439958 KCNJ12Q14500 433 aa16.78■□□□□ 0.28
CPSF7-205ENST00000439958 MIER3Q7Z3K6 550 aa16.78■□□□□ 0.28
CPSF7-205ENST00000439958 GLTPD2A6NH11 291 aa16.77■□□□□ 0.28
CPSF7-205ENST00000439958 TBCAO75347 108 aaKnown RBP16.77■□□□□ 0.28
CPSF7-205ENST00000439958 DSG3P32926 999 aa16.77■□□□□ 0.28
CPSF7-205ENST00000439958 Q4G0T1 1027 aa16.77■□□□□ 0.28
CPSF7-205ENST00000439958 LRRC8AQ8IWT6 810 aa16.77■□□□□ 0.27
CPSF7-205ENST00000439958 ANKRD13AQ8IZ07 590 aa16.77■□□□□ 0.27
CPSF7-205ENST00000439958 OPTNQ96CV9 577 aa16.77■□□□□ 0.27
CPSF7-205ENST00000439958 RWDD2AQ9UIY3 292 aa16.77■□□□□ 0.27
CPSF7-205ENST00000439958 IGLV3-22A0A075B6J6 115 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 CYP3A7-CYP3A51PA0A087WV96 503 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 RHOBTB3O94955 611 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 CYP3A7P24462 503 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 UBXN1Q04323 297 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 GRM1Q13255 1194 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 NOLC1Q14978 699 aaKnown RBP eCLIP16.76■□□□□ 0.27
CPSF7-205ENST00000439958 FAM26FQ5R3K3 315 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 CCDC65Q8IXS2 484 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 ADSSL1Q8N142 457 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 C7orf25Q9BPX7 421 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 MXRA8Q9BRK3 442 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 UNC45AQ9H3U1 944 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 TAF1DQ9H5J8 278 aaPredicted RBP16.76■□□□□ 0.27
CPSF7-205ENST00000439958 MAGEF1Q9HAY2 307 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 R3HCC1Q9Y3T6 440 aaKnown RBP16.76■□□□□ 0.27
CPSF7-205ENST00000439958 SPDYE16A6NNV3 312 aaPredicted RBP16.76■□□□□ 0.27
CPSF7-205ENST00000439958 PLA2G6O60733 806 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 CLCN1P35523 988 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 UTP14CQ5TAP6 766 aaKnown RBP16.76■□□□□ 0.27
CPSF7-205ENST00000439958 CATSPERGQ6ZRH7 1159 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 PPFIBP1Q86W92 1011 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 SLC10A4Q96EP9 437 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 RSPH10B2B2RC85 870 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 RSPH10BP0C881 870 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 COASYQ13057 564 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 ANKRD40Q6AI12 368 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 ARMC9Q7Z3E5 817 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 KIAA0895Q8NCT3 520 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 GIMAP8Q8ND71 665 aaPredicted RBP16.76■□□□□ 0.27
CPSF7-205ENST00000439958 GINM1Q9NU53 330 aa16.76■□□□□ 0.27
CPSF7-205ENST00000439958 IQCA1LA6NCM1 817 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 KRT31Q15323 416 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 UNC13DQ70J99 1090 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 RBM46Q8TBY0 533 aaKnown RBP16.75■□□□□ 0.27
CPSF7-205ENST00000439958 SMCR8Q8TEV9 937 aaPredicted RBP16.75■□□□□ 0.27
CPSF7-205ENST00000439958 LRRC27Q9C0I9 530 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 BCAS3Q9H6U6 928 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 TMEM150BA6NC51 233 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 SEPT14Q6ZU15 432 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 P2RX5Q93086 422 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 LXNQ9BS40 222 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 ACAD9Q9H845 621 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 CIITAP33076 1130 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 CNTN2Q02246 1040 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 TKFCQ3LXA3 575 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 TMEM119Q4V9L6 283 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 MOXD1Q6UVY6 613 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 OTOP1Q7RTM1 612 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 CRYGNQ8WXF5 182 aa16.75■□□□□ 0.27
CPSF7-205ENST00000439958 ZNF214Q9UL59 606 aaPredicted RBP16.75■□□□□ 0.27
CPSF7-205ENST00000439958 CENPFP49454 3210 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 GRIN3BO60391 1043 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 TPM2P07951 284 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 NR3C2P08235 984 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 RPA1P27694 616 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 MRPS9P82933 396 aaKnown RBP16.74■□□□□ 0.27
CPSF7-205ENST00000439958 PGM5Q15124 567 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 USP50Q70EL3 339 aaPredicted RBP16.74■□□□□ 0.27
CPSF7-205ENST00000439958 PDCD2LQ9BRP1 358 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 MRPL44Q9H9J2 332 aaKnown RBP16.74■□□□□ 0.27
CPSF7-205ENST00000439958 RRAGCQ9HB90 399 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 A1CFQ9NQ94 594 aaKnown RBP16.74■□□□□ 0.27
CPSF7-205ENST00000439958 VAV3Q9UKW4 847 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 SSC5DA1L4H1 1573 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 TBX3O15119 743 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 FAM13AO94988 1023 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 MYL1P05976 194 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 SPATA31C1P0DKV0 1188 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 HSD17B4P51659 736 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 GSDMDP57764 484 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 KCNB1Q14721 858 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 MYCT1Q8N699 235 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 FGFBP2Q9BYJ0 223 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 INTS13Q9NVM9 706 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 ARHGEF35A5YM69 484 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 GCNT3O95395 438 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 CYP11B2P19099 503 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 CDC25BP30305 580 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 SPIRE1Q08AE8 756 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 SPECC1LQ69YQ0 1117 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 NLRX1Q86UT6 975 aa16.74■□□□□ 0.27
CPSF7-205ENST00000439958 ERO1BQ86YB8 467 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms